Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 174 |
| Model size | 256 |
| Exons | 1 |
| Ec32 ortholog | Ec-07_003820.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | no signal peptide or anchor |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936521.9200003-UTR-E-siliculosus-1a_M_contig95:544427..544509 | 1622936521.9200003-UTR-E-siliculosus-1a_M_contig95:544427..544509 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 544428..544509 - |
| 1696251115.3622916-UTR-E-siliculosus-1a_M_contig95:544427..544509 | 1696251115.3622916-UTR-E-siliculosus-1a_M_contig95:544427..544509 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 544428..544509 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936521.9337037-CDS-E-siliculosus-1a_M_contig95:544509..544683 | 1622936521.9337037-CDS-E-siliculosus-1a_M_contig95:544509..544683 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 544510..544683 - |
| 1696251115.3709214-CDS-E-siliculosus-1a_M_contig95:544509..544683 | 1696251115.3709214-CDS-E-siliculosus-1a_M_contig95:544509..544683 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 544510..544683 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17527.1 >prot_E-siliculosus-1a_M_contig95.17527.1 ID=prot_E-siliculosus-1a_M_contig95.17527.1|Name=mRNA_E-siliculosus-1a_M_contig95.17527.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=58bp
MLPILSQTKGKKTGCSLGGRVHEDYEVGRWDMVLASEELLLYVRGIAESG
SPFRLCC* back to topmRNA from alignment at E-siliculosus-1a_M_contig95:544428..544683- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig95.17527.1 ID=mRNA_E-siliculosus-1a_M_contig95.17527.1|Name=mRNA_E-siliculosus-1a_M_contig95.17527.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=256bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:544428..544683- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTGCCGATCCTCAGTCAGACGAAGGGCAAGAAAACGGGGTGTTCTCT
CGGTGGACGGGTCCACGAGGATTATGAGGTGGGGCGCTGGGATATGGTGC
TCGCGTCTGAAGAGCTCTTGTTGTATGTACGGGGCATAGCTGAGTCAGGA
TCGCCCTTTCGCCTCTGCTGCTAGCCGCATACAAGCTAGGTACGGTGACA
GCTCTCGCTGCGGCCGCTCTGGTTTCGCGCTTCCTCAACCATTAGCATTT
TTCGTT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:544428..544683- >mRNA_E-siliculosus-1a_M_contig95.17527.1 ID=mRNA_E-siliculosus-1a_M_contig95.17527.1|Name=mRNA_E-siliculosus-1a_M_contig95.17527.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=348bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:544428..544683- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTGCCGATCCTCAGTCAGACGAAGGGCAAGAAAACGGGGTGTTCTCT
CGGTGGACGGGTCCACGAGGATTATGAGGTGGGGCGCTGGGATATGGTGC
TCGCGTCTGAAGAGCTCTTGTTGTATGTACGGGGCATAGCTGAGTCAGGA
TCGCCCTTTCGCCTCTGCTGCTAGATGTTGCCGATCCTCAGTCAGACGAA
GGGCAAGAAAACGGGGTGTTCTCTCGGTGGACGGGTCCACGAGGATTATG
AGGTGGGGCGCTGGGATATGGTGCTCGCGTCTGAAGAGCTCTTGTTGTAT
GTACGGGGCATAGCTGAGTCAGGATCGCCCTTTCGCCTCTGCTGCTAG back to top
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