Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
D7G1X0_ECTSI (MAPK related serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X0_ECTSI)
HSP 1 Score: 461 bits (1186), Expect = 1.100e-155
Identity = 313/334 (93.71%), Postives = 314/334 (94.01%), Query Frame = 3
Query: 510 KPYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSLYPLFPGTNELDQIGRVHKVLGNPSGEVLGKFKQNGAAHVDFDFATQKGIGVAQLIPHASTECVDLITKLLRYDWSDRCTARESLRHPYFREIREVDLRKAQAESTSKLARGTTEDAADGGDSATVASTGRAPQMTTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQAVGQXXXXXXXXXXXXNRGYYDSNIRSKYNGMSNGXXXXXXXXN--GFGGAKGHGITSRSSFSLMQAXXXXXXAMGSNIGYGXXXXXXXXXXVPGGMTAQAPERARVGKNASRYRQLR 1505
+PYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSLYPLFPGTNELDQIGRVHKVLGNPSGEVLGKFKQNGAAHVDFDFATQKGIGVAQLIPHASTECVDLITKLLRYDWSDRCTARESLRHPYFREIREVDLRKAQAESTSKLARGTTEDAA GGD ATVASTGRAPQ T GA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX QAVGQXXXXXXXXXXXX RGYYDSNIRSKYNGMSNGXXXXXXXX GFGGAKGH ITSRSSFSLMQAXXXXXXAMGSNIGY X X XXXXXVPGGM AQAPERARVGKN SRYRQLR
Sbjct: 161 QPYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSLYPLFPGTNELDQIGRVHKVLGNPSGEVLGKFKQNGAAHVDFDFATQKGIGVAQLIPHASTECVDLITKLLRYDWSDRCTARESLRHPYFREIREVDLRKAQAESTSKLARGTTEDAAGGGDPATVASTGRAPQ--TRGAPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAVGQXXXXXXXXXXXXXRGYYDSNIRSKYNGMSNGXXXXXXXXXXXGFGGAKGHRITSRSSFSLMQAXXXXXXAMGSNIGYXXNGXAXXXXXVPGGMAAQAPERARVGKNTSRYRQLR 492
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A6H5KHA5_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA5_9PHAE)
HSP 1 Score: 351 bits (901), Expect = 1.750e-112
Identity = 174/189 (92.06%), Postives = 177/189 (93.65%), Query Frame = 3
Query: 474 LLQAGMTLLKLTKPYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSLYPLFPGTNELDQIGRVHKVLGNPSGEVLGKFKQNGAAHVDFDFATQKGIGVAQLIPHASTECVDLITKLLRYDWSDRCTARESLRHPYFREIREVDLRKAQAESTSKLARGTTEDAADGGDSATVASTGRAPQM 1040
L G + + PYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSLYPLFPGTNELDQIGRVHKVLGNPSGEVLGKFKQNGAAHVDFDFATQKGIGVAQLIPHAS ECVDLITKLLRYDWSDRCTARESLRHPYFREIREVDLRKAQAESTSKLARG TEDAA GGDSATVASTGRAPQ+
Sbjct: 148 LADFGSSTCFVAVPYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSLYPLFPGTNELDQIGRVHKVLGNPSGEVLGKFKQNGAAHVDFDFATQKGIGVAQLIPHASAECVDLITKLLRYDWSDRCTARESLRHPYFREIREVDLRKAQAESTSKLARGATEDAAGGGDSATVASTGRAPQL 336
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A836CJ03_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ03_9STRA)
HSP 1 Score: 307 bits (786), Expect = 7.460e-96
Identity = 154/162 (95.06%), Postives = 159/162 (98.15%), Query Frame = 1
Query: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQH+ITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYL+ Q LVRSYMYQLLKALDHMHRKGIFHRDIKPENILIEST+++ RGLKLADFGSCRGIYSKQ
Sbjct: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHIITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLSDQ-LVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTSEVRRGLKLADFGSCRGIYSKQ 161
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A7S1U4P2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4P2_9STRA)
HSP 1 Score: 303 bits (775), Expect = 4.140e-94
Identity = 151/162 (93.21%), Postives = 156/162 (96.30%), Query Frame = 1
Query: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKN FD+I+QVNNLREIQALRRLSP+ HVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN Q LV+SYMYQLLKALDHMHRKGIFHRDIKPENILIE T D+GRGLKLADFGSCRGIYSKQ
Sbjct: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNHFDNIEQVNNLREIQALRRLSPHPHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNAQ-LVKSYMYQLLKALDHMHRKGIFHRDIKPENILIEGTGDIGRGLKLADFGSCRGIYSKQ 161
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A7S3ZQT9_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQT9_9STRA)
HSP 1 Score: 292 bits (748), Expect = 7.340e-90
Identity = 145/162 (89.51%), Postives = 155/162 (95.68%), Query Frame = 1
Query: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
MRKYRLVAKKGEGTFSEVLKAQNVKDGKY+AIKCMKN FDSIDQVNNLREIQALRRLSP+ H+ITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN Q L++SYM+QLL ALDHMHRKGIFHRDIKPENILIE+ +D+ +GLKLADFGSCRGIYSKQ
Sbjct: 5 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYHAIKCMKNHFDSIDQVNNLREIQALRRLSPHGHIITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNAQ-LIQSYMHQLLMALDHMHRKGIFHRDIKPENILIENKSDVNKGLKLADFGSCRGIYSKQ 165
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A7S2BNA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNA4_9STRA)
HSP 1 Score: 291 bits (746), Expect = 1.380e-89
Identity = 143/160 (89.38%), Postives = 154/160 (96.25%), Query Frame = 1
Query: 7 KYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
KYRLVAKKGEGTFSEVLKAQNVKDGKY+AIKCMKN FDSIDQVNNLREIQALRRLSP+QH+I LEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLN L+RSYM+QL++AL HMHRKGIFHRDIKPENILIE+T+++GRGLKLADFGSCRGIYSKQ
Sbjct: 5 KYRLVAKKGEGTFSEVLKAQNVKDGKYHAIKCMKNHFDSIDQVNNLREIQALRRLSPHQHIIALEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNAN-LIRSYMFQLVRALHHMHRKGIFHRDIKPENILIENTSEMGRGLKLADFGSCRGIYSKQ 163
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A7S1CVI0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CVI0_9CHLO)
HSP 1 Score: 263 bits (671), Expect = 6.430e-83
Identity = 132/160 (82.50%), Postives = 146/160 (91.25%), Query Frame = 1
Query: 4 RKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSK 483
RKYRLV+KKGEGTFSEVLKAQN+KDGKY+AIKCMKN FD+IDQVNNLREIQALRRLSP+ H+ITLEEVLYDQPTGRLALVFELMDANLYE+IRGRR YL+ L+++Y++QLL ALDHMH KGIFHRDIKPENILIES + LKLADFGSCRGIYSK
Sbjct: 1 RKYRLVSKKGEGTFSEVLKAQNIKDGKYHAIKCMKNHFDTIDQVNNLREIQALRRLSPHAHIITLEEVLYDQPTGRLALVFELMDANLYEVIRGRRQYLHSD-LIQTYIFQLLHALDHMHCKGIFHRDIKPENILIESCCEGLTTLKLADFGSCRGIYSK 159
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A0W8DIB8_PHYNI (Protein kinase domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DIB8_PHYNI)
HSP 1 Score: 265 bits (676), Expect = 7.020e-81
Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = 1
Query: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
MRKYRLVAKKGEGTFSEVLKAQNVKD K++AIKCMKN F+SIDQVNNLREIQALRRLSP+QH++ LEEVLYDQP+GRLALVFELMDANLYE+IRGRRHYL LV+S MYQL+K+LDHMH KGIFHRDIKPENIL+E + LKLADFGSCRGIYSKQ
Sbjct: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDNKFHAIKCMKNHFESIDQVNNLREIQALRRLSPHQHIVKLEEVLYDQPSGRLALVFELMDANLYEMIRGRRHYLKPD-LVQSLMYQLVKSLDHMHNKGIFHRDIKPENILVEDSTK----LKLADFGSCRGIYSKQ 157
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A3R7G578_9STRA (Protein kinase domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G578_9STRA)
HSP 1 Score: 262 bits (670), Expect = 1.440e-79
Identity = 132/162 (81.48%), Postives = 147/162 (90.74%), Query Frame = 1
Query: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
MRKYRLVAKKGEGTFSEVLKAQNVKD K++AIKCMKN F+SIDQVNNLREIQALRRLSP+QH++ LEEVLYDQP+GRLALVFELMDANLYE+IRGRR+YL LV+S MYQL+K+LDHMH KGIFHRDIKPENIL+E ++ LKLADFGSCRGIYSKQ
Sbjct: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDSKFHAIKCMKNHFESIDQVNNLREIQALRRLSPHQHIVKLEEVLYDQPSGRLALVFELMDANLYEMIRGRRNYLKPD-LVQSLMYQLVKSLDHMHNKGIFHRDIKPENILVEDSSK----LKLADFGSCRGIYSKQ 157
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Match:
A0A2P4WWL7_9STRA (CMGC/RCK protein Kinase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWL7_9STRA)
HSP 1 Score: 265 bits (676), Expect = 2.080e-79
Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = 1
Query: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDGKYYAIKCMKNRFDSIDQVNNLREIQALRRLSPNQHVITLEEVLYDQPTGRLALVFELMDANLYELIRGRRHYLNGQQLVRSYMYQLLKALDHMHRKGIFHRDIKPENILIESTNDLGRGLKLADFGSCRGIYSKQ 486
MRKYRLVAKKGEGTFSEVLKAQNVKD K++AIKCMKN F+SIDQVNNLREIQALRRLSP+QH++ LEEVLYDQP+GRLALVFELMDANLYE+IRGRRHYL LV+S MYQL+K+LDHMH KGIFHRDIKPENIL+E + LKLADFGSCRGIYSKQ
Sbjct: 1 MRKYRLVAKKGEGTFSEVLKAQNVKDNKFHAIKCMKNHFESIDQVNNLREIQALRRLSPHQHIVKLEEVLYDQPSGRLALVFELMDANLYEMIRGRRHYLKPD-LVQSLMYQLVKSLDHMHNKGIFHRDIKPENILVEDNSK----LKLADFGSCRGIYSKQ 157
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17526.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.10e-155 / Id = 93.71 Expect = 1.75e-112 / Id = 92.06 Expect = 7.46e-96 / Id = 95.06 Expect = 4.14e-94 / Id = 93.21 Expect = 7.34e-90 / Id = 89.51 Expect = 1.38e-89 / Id = 89.38 Expect = 6.43e-83 / Id = 82.50 Expect = 7.02e-81 / Id = 82.10 Expect = 1.44e-79 / Id = 81.48 Expect = 2.08e-79 / Id = 82.10 Sequence D7G1X0_ECTSI A0A6H5KHA5_9PHAE A0A836CJ03_9STRA A0A7S1U4P2_9STRA A0A7S3ZQT9_9STRA A0A7S2BNA4_9STRA A0A7S1CVI0_9CHLO A0A0W8DIB8_PHYNI A0A3R7G578_9STRA A0A2P4WWL7_9STRA Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 1020 Model size 1508 Exons 10 Ec32 ortholog Ec-07_003830.1 Ec32 ortholog description MAPK related serine/threonine protein kinase Hectar predicted targeting category other localisation BRITE ko00000,ko01000,ko01001 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. G EC 2.7.11.22 Ec32 ortholog Ec-07_003830.2 EggNOG OGs KOG0661@1,KOG0661@2759 EggNOG free text desc. protein serine/threonine kinase activity GOs GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005929,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010468,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044441,GO:0044463,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0097546,GO:0120025,GO:0120038,GO:0140096,GO:1901564 KEGG ko ko:K08830 Preferred name MOK Seed eggNOG ortholog 44056.XP_009039854.1 Seed ortholog evalue 1.7e-57 Seed ortholog score 229.9 Taxonomic scope Eukaryota
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936521.7042284-UTR-E-siliculosus-1a_M_contig95:535577..535709 1622936521.7042284-UTR-E-siliculosus-1a_M_contig95:535577..535709 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 535578..535709 + 1696251115.2474878-UTR-E-siliculosus-1a_M_contig95:535577..535709 1696251115.2474878-UTR-E-siliculosus-1a_M_contig95:535577..535709 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 535578..535709 + 1622936521.725787-UTR-E-siliculosus-1a_M_contig95:537093..537270 1622936521.725787-UTR-E-siliculosus-1a_M_contig95:537093..537270 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 537094..537270 + 1696251115.2595456-UTR-E-siliculosus-1a_M_contig95:537093..537270 1696251115.2595456-UTR-E-siliculosus-1a_M_contig95:537093..537270 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 537094..537270 + 1622936521.7427032-UTR-E-siliculosus-1a_M_contig95:537715..537894 1622936521.7427032-UTR-E-siliculosus-1a_M_contig95:537715..537894 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 537716..537894 + 1696251115.2688932-UTR-E-siliculosus-1a_M_contig95:537715..537894 1696251115.2688932-UTR-E-siliculosus-1a_M_contig95:537715..537894 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 537716..537894 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936521.7606995-CDS-E-siliculosus-1a_M_contig95:537894..537918 1622936521.7606995-CDS-E-siliculosus-1a_M_contig95:537894..537918 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 537895..537918 + 1696251115.2779977-CDS-E-siliculosus-1a_M_contig95:537894..537918 1696251115.2779977-CDS-E-siliculosus-1a_M_contig95:537894..537918 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 537895..537918 + 1622936521.774948-CDS-E-siliculosus-1a_M_contig95:538077..538257 1622936521.774948-CDS-E-siliculosus-1a_M_contig95:538077..538257 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 538078..538257 + 1696251115.286838-CDS-E-siliculosus-1a_M_contig95:538077..538257 1696251115.286838-CDS-E-siliculosus-1a_M_contig95:538077..538257 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 538078..538257 + 1622936521.7871375-CDS-E-siliculosus-1a_M_contig95:538701..538851 1622936521.7871375-CDS-E-siliculosus-1a_M_contig95:538701..538851 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 538702..538851 + 1696251115.2960484-CDS-E-siliculosus-1a_M_contig95:538701..538851 1696251115.2960484-CDS-E-siliculosus-1a_M_contig95:538701..538851 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 538702..538851 + 1622936521.804563-CDS-E-siliculosus-1a_M_contig95:539644..539737 1622936521.804563-CDS-E-siliculosus-1a_M_contig95:539644..539737 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 539645..539737 + 1696251115.3059134-CDS-E-siliculosus-1a_M_contig95:539644..539737 1696251115.3059134-CDS-E-siliculosus-1a_M_contig95:539644..539737 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 539645..539737 + 1622936521.8201702-CDS-E-siliculosus-1a_M_contig95:540384..540486 1622936521.8201702-CDS-E-siliculosus-1a_M_contig95:540384..540486 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 540385..540486 + 1696251115.3162067-CDS-E-siliculosus-1a_M_contig95:540384..540486 1696251115.3162067-CDS-E-siliculosus-1a_M_contig95:540384..540486 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 540385..540486 + 1622936521.8360493-CDS-E-siliculosus-1a_M_contig95:541126..541258 1622936521.8360493-CDS-E-siliculosus-1a_M_contig95:541126..541258 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 541127..541258 + 1696251115.3265896-CDS-E-siliculosus-1a_M_contig95:541126..541258 1696251115.3265896-CDS-E-siliculosus-1a_M_contig95:541126..541258 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 541127..541258 + 1622936521.8648627-CDS-E-siliculosus-1a_M_contig95:542142..542280 1622936521.8648627-CDS-E-siliculosus-1a_M_contig95:542142..542280 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 542143..542280 + 1696251115.3366506-CDS-E-siliculosus-1a_M_contig95:542142..542280 1696251115.3366506-CDS-E-siliculosus-1a_M_contig95:542142..542280 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 542143..542280 + 1622936521.8784127-CDS-E-siliculosus-1a_M_contig95:542634..542835 1622936521.8784127-CDS-E-siliculosus-1a_M_contig95:542634..542835 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 542635..542835 + 1696251115.347332-CDS-E-siliculosus-1a_M_contig95:542634..542835 1696251115.347332-CDS-E-siliculosus-1a_M_contig95:542634..542835 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 542635..542835 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17526.1
>prot_E-siliculosus-1a_M_contig95.17526.1 ID=prot_E-siliculosus-1a_M_contig95.17526.1|Name=mRNA_E-siliculosus-1a_M_contig95.17526.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=340bp
MTLLKLTKPYTEYISTRWYRAPECLLTDGYYGPEMDQWGAGCVFFEITSL back to top mRNA from alignment at E-siliculosus-1a_M_contig95:535578..542835+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17526.1 ID=mRNA_E-siliculosus-1a_M_contig95.17526.1|Name=mRNA_E-siliculosus-1a_M_contig95.17526.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7258bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:535578..542835+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)ATGAGGAAGTACCGGTTGGTAGCCAAAAAGGGAGAGGGGACCTTCAGCGA
GGTGCTCAAGGCGCAGAACGTCAAGGACGGGAAGTACTATGCCATCAAGT
GTATGAAGAACAGGTTCGACAGTATTGATCAG GTGAGCCGCCGTCTCAAC
GGAGCTGCACAGGATCGGTCCAGAAGAGGATGTGACAGCAGTACAAATAG
GACAGCAAAATATTTTTCTTTTTTCCCGTGGAATGCCGAACTGCACAAAG
AGGTCGAAGCGGAGACGCCTTCAAAATTCGTGTGTTGCTCGAACCCGGCT
AGGATCGCATGGCGGAGCTTGTTGATCCAGCTAGACTCGAAAACTCCACA
TCATCACGGACTGCGCCCACCGATCCGTCATACAATGTGGGCTACCACGC
GGTAAACTCCTTACAGTCATGATGACGATCATGACGTGTAAGACGCACAG
CTGAACAGGGTATCCATTTTTACCCGCCGAGATGTTGATGGACTACAGAG
TACATACACACCAACGTCTCCCTTAGCTAATCTTCCTCCTAGCGCTAATC
TTCCTCCTAACGGAAGACCTCGGGACGATCTGGTCATTGATGCATCCGGT
TCAAAATACGTTGTCACATCCCTGGTGTGCCGACAAAAGCTGAATAGTCT
AGTATCAAGTTCTCGATACGTCCTGTGCGTGCATGTAGGACAGACAGTGC
TGGTACGCCTTCAGTAGTCTACAGCAGTACGCCCGGTTGCGAATGTCGCT
TTTGTTGCAGTACTCCACGACCGGGGGCACGCATAGTATTACGCCATTTA
TTTGATGCTCGATTCTGATTCTTCACCGTTGCCGCAAAATGTACGTCACT
TTCTGTAGACATACCCTGAGACTTTGGGCGCACTCGTTCCGTGCCAACCA
ACATGGAACTAATAACATGGTTGTTGCCCGCACATGTAGGAGCGTTTTTT
TTTTAAATAGCACGTAGACAGCATCTAACTTCATTCTTATTTACTATTAG
TTTGGGCAGGACATACATGTACGAGATGATGCATGTCGATACAACACGAA
AGCTCTTGGTGGAAAACGAATCGTCATGGATCGGCGAATAGGAGCAATGC
CGGTGGCCATGCGCATTGGATCGGCAGTGGTGGTGCCTACACGCTGGAGC
GATATTTACTGTCTGGCTCAATGCGTTCACCACCACGGTTAATTAAGTTT
TCATGCACTACAAAAAGTGTAGTACGCGTCTCACCACGAAAAATGGGGGG
ACTGTCGCCATAATAAAATAGGACGAAACACACACACACACGACAATAGA
TCGTAGACTAGACGCCAATATAGGTCGACAACAACAAAACTCCCCGGAGA
AATGGAGATGGAAGAATGGCTTCCAGCGGTTACCCGTCATGCCAAAATTT
CGACCCGCGTCGTCCATTTATCAAACGAAATACCGTTCTCGTCATCGACA
ACAGCAACGGCAGCAACGGCAGCAACGGCAGCAACGGAAACACCAAATCG
CTCACAACGTAAACAGGTGAACAACTTGCGAGAGATCCAGGCATTGAGAC
GACTCAGCCCAAACCAGCACGTGATCACTCTGGAGGAAGTGCTGTACGAT
CAGCCCACCGGAAGACTTGCGCTTGTTTTTGAGCTCATGGACGCTAACCT
TTACGAGCTCATTCGAGGGAGACGACACTACCTCAATGGCCAG GTACGTA
GATCTGCCGCCCCGCAGCAAAGAAGCAATCTGGGGGGAGTCGCTTCGATG
GAAAGCTATGGGGCAACTGAATAAGTTCTTTCGTCGTATCTTCTACTGAA
ACAACGCATAATGTATCACCAGAAACAACACGGTACTATTGTTGTTAATG
TCGTTGCTGCTGCTATCGTTCCCCCTGCCGTTCCTACTCCTCAACACCGA
CGCAAGGCTTCCGTGTCAACTCTCATCCAAGCGCTTCTGTATCCAGCTGA
GACACAAGTCGTTCGTCTGCAAAAAGACCAAAGTTTGGCCACCCGTCTTC
CAAAATCCAAGAAGTTGATCCAAGCAGAAACACGAGTCGCCGGCTTTAGA
AGCGATGTATAAATCTGAATAGTCCTTCCCTCCCCCTGCTCTGCCTTAAA
CTCCGCACACGACCGCGAAACGCGTCGTGCGCGACGAGCAGCTGGTGCGA
AGCTACATGTACCAGCTGCTGAAGGCGTTGGATCACATGCACCGGAAAGG
GATCTTCCACCGGGATATCAAGCCGGAGAACATCCTGATCGAGAGCACAA
ACGACCTGGGCAGGGGCCTAAAGCTGGCGGATTTCGGCTCGTGTAGAGGC
ATCTACTCCAAGCAGGC ATGACATTGCTAAAATTAACCAAA GTTGTCGAA
GAAACACACATCTGTGGGAACAAACAGCCTTCAACGAGGCACACCTACCG
CATCCACCCAAACCCCTTTGAATCTGCTAATCCCTTCGCAATTTGACCGC
CCGTCGCCTTGTCTCCAACCCCCCCGACTCTCCCTTGGGGTCAAAATCAG
CCTTACACGGAGTACATCTCTACTCGGTGGTACCGAGCTCCGGAGTGTCT
CCTCACGGATGGCTACTACGGCCCGGAGATGGACCAGTGGGGAGCGGGCT
GCGTCTTCTTCGAGATAACCAGCCTGTACCCCCTCTTCCCGGGGACCAAC
GAGCTGGACCAGATCGGCAGAGTCCACAAG GTGAGAGACAGTAGCTACAA
CTTCTGAGGCACCTCCCCTTGTGGAGGGGAGCGGTGCTTGGACTTGTGCA
GGCCAGGCCTCGCCGCTCCGGAGCAAAGGGAAAGGGATGCGGCCAAAGAA
AGGATCACGCGGACAGGACCTCAGACGGCTATTTGTGTGTCTGTCTACAT
AATCTCCGACATCTCCCAAATGTGACCTTGCTTTCCCCCCCCCTTGCCAT
GTACTGTCCGCGGGATCTTAGTATTTAGGTGGACCCGATAGATAAGCAGC
CACCAATCGACCGAGCACTTTCGGTTCAAGCACCAATGATCCAGACAAAA
AATATTCTGTAGAGGGTGCTGGTACATCGGGGTATGCACGCTGAGAGCCG
CTGCCGAGTGTGCACCCCCCCCCTCCCTACCCCTTTCCCACAAAACACGC
CTTTTTATCCACAAACGGAAACAGGTGTTAGGAAACCCTTCCGGCGAGGT
GTTGGGGAAGTTCAAGCAGAACGGGGCGGCGCACGTGGACTTCGACTTCG
CGACGCAGAAGGGCATCGGGGTGGCGCAGCTGATACCCCACGCGTCGACG
GAGTGCGTCGACCTCATCACTAAG GTCAGAGGGCGAGAGAGCAAGAGAGA
GGCGGGGAGAGAGAGACAAAGAAAGAGAGCGAGGGAGGGAGGGAGAGAGA
AAGTCAGAAAGAGAGAGAGAGAGAGAGATTGGACTACAAGTATTTTGTCT
GATCCTGAATGTGGCGCTGTGCTATGCTACAGCAGTACGCTGTGCATTGC
TCGGCTACCGTAGAGCCAGTGGTGCGGCTTTGGTGGTTCTGTTGGGCTCA
TGCGTCAACCCTGTTGATCAAGAACTGTGCGTGAGCTAGAGGGAGATGGT
GACATGGTTGTTCTTGGCCGTTCGTCGGACAATACTTTTCAACACAGAAG
CCGTGGCATCTATGGACGGAGTAGCACGGAACACGGAATGCGAAGGAAGG
TTTTAGGGGGGGGTCAGAGTTGTTTTCGGAACGGCGGAGACACCGATGAC
AACAACGGCAACAGCAGCAGCTGCACCACCACCAATAACAATGACCAACA
ACAACAACGTACATTCTTTGGTGTCAGCTGCCTAGCACGGCACACAGCCT
TTCGGAGAACAACTCAGTACCCCACTTCCTCTCACCTCTCTCAAATTGCT
CGGAACGCTGCAATATCTCCAATTGTTTTGGCTAAGCACCACCTCTTTCC
CGTCTCCGAAATGGAAACAACGCAGAAGCCTATGGCCTTGTGGCTGAGGG
CAGAAACAAAAGCCTCCCTCCCACCCCCTCCAATTCCCCCAACGGTCAAG
ACTCCTCCTCTTCCCTTTCGCTCACTTTAGCCTCTGCTTCCGCCCTGATG
GACTTGATTTGCCGCAGCTGCTGAGGTACGACTGGTCAGATCGCTGCACC
GCCAGGGAGTCATTGAGGCACCCCTACTTCCGAGAGATCCGAGAGGTCGA
CCTAAGAAAG GTAGGTGACCGTAACGTATAAAGGATGACCCCCAGGGGCT
ATCGTACTTCGCACTACAATAGTCGTCTTGGAGTCTGCTCCCTTAGGCTA
ACCAGGAGTTACTGCCGACTCGTTCGCTCTGTTAGGCTCTACACCTATCG
ATCTGCGAATGGTAAAGGCAACAGCAAGAGGTGATCCCCAGGGGCTGTAC
CTCGCTCTCAAATTGTAGACCAGGCTGCACTTGTAGTCGTCTTAGAGTCT
TCTCCCTTAGGCCAACCAGGAGCTAGTGCCGACTTATTCGCTCTGTATAT
CGCTACACCTGTCGACCTGCGAATGGTAAAGGCAACAGGCAAGAGGTGAT
GCCCAAGGGCTACTACCGTACCTCGCTCTCAATATTGTAAGACCAGGCTG
CACTTGTAGTCGTCTTAGAGTCTTCTTTCTCCCTTAGGCCAACAAGGAGT
ACCTCCCGAAATGCTCCCTCTGAAAAGCGCTACCTAAAACACGTGCCAGG
CCAACAAGCGTGCGCAATCAGCTAGTAGCCTCTGGGTAGGCTGTTCACCG
TCGACTTGAAAAAGCGGAACAGCCGACAAGCCACATCTTTGAAGCAAGTC
TGCAAAAAAAAAAAAGGCTCTTCTTGTTTCTCTCGACCGAAACGTGCCGA
TTGGCAGGCACAGGCTGAATCGACCTCGAAGCTAGCGAGGGGGACGACGG
AAGATGCCGCGGACGGGGGCGACTCAGCAACAGTAGCTAGCACCGGCCGG
GCCCCTCAG GTGTGGAGCTTTTCTTTGACCAATTGGGATTTCGCTCTTGG
AAGAACAGTTTCCGCCGCCCCATACGCAACCATCCGTTTCGAAGCTTGTG
CGTCACAAAAATTTCCCAACTCCGAATGTTGAACCTAGCGCCAATCTATC
TATCGCCCCCGCCCCGCAGCTCGCGCACAAAACTTCGGTGGGGGACCCCG
GTCAGTCGGGCAAGGCCCTGCCGACCATCGGCCAGCAAGGAAGCACCACA
GTCGTCGGCGGTGGCGGTGGCGGTGGCGGCGGCGGTGGCGGCGGCGGCGG
CGGGAGCGGTGGCGCAAACAATTCTAGCGCAGCAGTTGGCGGCGGCGGGG
GTACAAGCATCGGCGGGTACGGCGGGGGCGGCGGCGGTGGGAAAAAGCAT
CCCAAGATAGCCAAGACGGGATCCCTCGCTCGAGGTCTCGGTGGGGGAAA
GCACGGCCACGTCGGCGGCAACGGCGGCGGTGACGGTGGCGGCGGCGGCG
GCGGTGGATCTGGTTCTAACGCCGCGGCACATGGTGGGCACAGCGGGGAC
GGCGGTGGTGGAGGAGGAGGGTCGCACGGCCCGTCCGGCGAGTCCGTGGA
GGAAAGCGCGTTGCCGCCGATAATGGGGATCTTGGGGAACGGCACGAAGA
TGACAACGGGGGGCGCCGGGGGcggggggggaGGGGGGGGGGGGGCGAAC
CACGGGACCGGGGCGGGAGGGGGAGGCGGGGGAGGGGGAGGAGGAGGAGG
AGGGAGATACAGAGGGCAGGCGGTCGGGCAG GTACTGTGATTACCCCTGT
GTTTGATGCTGTGCCGCCGCGTGCAAATTGCTTCTTCTTCTTCGTATTGC
TTTGGTTAGCATCAAGCATGTTGTTTGTTGTATGCTAGATAGGGTTTGAC
GAGAAAACACAAGCTACAGTCCCTTGGCTGCCGTAGCCGTTGCTTCTGCC
TTGTCCTTCTTGCTGTCTTCCCCGTAAGCATATTTTTCTGTCACCGAAGG
TCCAGAAGTTCCATCTCTTTTCGTCACATGAAAACTGTGTGAAGAAAAGG
GGCGGGTGTCTGATGCAGGGTGTTCTCATGCTCAATATTCGTCCTGTGGA
AGCGTGCTCTCATGTTCGTTAGGAGCGTGCCGTTCTCACAGCAATAGTAA
GAACCATTCCGTGACCATAAGTAAAAAGATCGATGGGTATGCTGCACACC
AATCCTAGTTAGTAAGTCGACGAGGAGGCAGGCCACTGGCATGCCAACGC
CGCTCCTTTGCGCTCTCGCGACGACGACGCTAATCGCGGGAACTTCGACC
AGCTGAAAAACACGCGGCATGCAAGGAACTACCCGACTGTTGTTGTCGTT
GTCGTTGTTGTCGTTGTCGTTGTGTTGTCGTCGTTGTTGATGTTGTCATC
ATCGTTGCAACGGCGACCACTCTTGCCAATCCCCGCCTTCGTCATAGGGC
TCATAGGGCGCGAGAGGCACGCGAGAAGAAGACTAACGTCTCTCACGACA
TTCTCCTCCGTGAGAACAACAAGCGGAAAAGCCGTTCTCCGCCTACAAAC
CCCCCCGAAGCCACCACCACCACCTCCGTGTTGGGGGCATGAATCGAAGG
TGGCGTTCTTCTCACATGCGGAACGTCCTTCTCACGCCCCCTCCCTTTTT
CCCACCGTATTCCAGGGAGGATCCAAGGCGTCCTCAAAGAAAAAGAAGAA
GAATCGCGGCTACTACGACAGCAACATTCGGAGCAAGTACAACGGGATGA
GCAACGGCGGCGGAGGCGGAGGTGGAGGCGGAAACGGTTTCGGAGGGGCG
AAG GTGCGCCGCAAAATTATAATGTATATTTTTCAAGTGGGCTTCATTCC
ACCACCTGAGCACATGGGGTGCATGCGCCTACGGTAGGAAGAGGAACTTC
GGGTGCCCGTTCTCCACGAAACACGTTGTTAAGGCTATGCGTGCAATTTC
ACAGGTTTCATGAAGGACCGTGTCGCACATGGGTTTCAACACCTGGTCTA
CAAGAAGCAAGCGGTTCTGCAAAGAGTTGACCTCAGCTTCTCGAAACCGT
ACACACAGACATGCTACACACGCCTCATTTAAGACTCTTGACCTACTGTA
CCTACCCCTTGCCTTCATCATGCCCCGCCACTTCTGACCAACCGCCCCGC
ACACAAGGGGCACGGGATCACCTCTCGGAGCAGCTTTTCGTTGATGCAAG
CCGCCGGGGGGGGCGGGGGGGCGATGGGTAGCAATATCGGCTATGGCGGC
AACGGCGGGGCAGGCGGCGGCAACGGAGTCCCCGGGGGCATGACGGCCCA
GGCGCCGGAGCGGGCGAGAGTCGGGAAAAACGCGTCGCGGTATCGCCAAT
TGCGCTGA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:535578..542835+
>mRNA_E-siliculosus-1a_M_contig95.17526.1 ID=mRNA_E-siliculosus-1a_M_contig95.17526.1|Name=mRNA_E-siliculosus-1a_M_contig95.17526.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2040bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:535578..542835+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top