mRNA_E-siliculosus-1a_M_contig95.17523.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17523.1 vs. uniprot
Match: D7G1W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W7_ECTSI) HSP 1 Score: 50.8 bits (120), Expect = 2.360e-5 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -2 Query: 615 AKAREALIGSAGMEQLIKMVAQDDGE 692
AKAREALIGSAGMEQLIKMVAQDDGE
Sbjct: 13 AKAREALIGSAGMEQLIKMVAQDDGE 38
BLAST of mRNA_E-siliculosus-1a_M_contig95.17523.1 vs. uniprot
Match: A0A6H5KFF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF7_9PHAE) HSP 1 Score: 50.8 bits (120), Expect = 5.030e-5 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = -2 Query: 615 AKAREALIGSAGMEQLIKMVAQDDGE 692
AKAREALIGSAGMEQLIKMVAQDDGE
Sbjct: 45 AKAREALIGSAGMEQLIKMVAQDDGE 70 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17523.1 >prot_E-siliculosus-1a_M_contig95.17523.1 ID=prot_E-siliculosus-1a_M_contig95.17523.1|Name=mRNA_E-siliculosus-1a_M_contig95.17523.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=183bp MNHRYVNNTGEQPASLGGKTEFQDREPLEASTPSPYESSGVAGDCYYPSVback to top mRNA from alignment at E-siliculosus-1a_M_contig95:516414..517106+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17523.1 ID=mRNA_E-siliculosus-1a_M_contig95.17523.1|Name=mRNA_E-siliculosus-1a_M_contig95.17523.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=693bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:516414..517106+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:516414..517106+ >mRNA_E-siliculosus-1a_M_contig95.17523.1 ID=mRNA_E-siliculosus-1a_M_contig95.17523.1|Name=mRNA_E-siliculosus-1a_M_contig95.17523.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1098bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:516414..517106+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |