mRNA_E-siliculosus-1a_M_contig95.17519.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: D7G1W3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W3_ECTSI) HSP 1 Score: 1218 bits (3151), Expect = 0.000e+0 Identity = 643/715 (89.93%), Postives = 658/715 (92.03%), Query Frame = 1 Query: 634 MGAVNLWRRSDPLLVRLLLRPVEGATHAAENERGHRFPSWDDFSTTGNSFSDAPGAPRSRNLNGSGNGGCPPQMAGESKLAHSRGNAAVGRPSYDRPYEVVAQEHQSERESSKNKIGGGVCCGQGSDGFAQGSPEAPGGVRQQRQRQPLLRSDSDRAILGRVDYGAVKRDLRRLAEEVAEGKVDLRRNPGVSSAGGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTEAGGKGGGGRGISTLLGVLLRLGVRPSPPSLPSAESHEAKQQPSHERKYMSESAQAREEAGNTEGKLGQSDGAKRVSLGTKEETPRWEEFGGDPGRLVTDYTVRLLSALVSMSKARCYVLGERCEETIETLAELLRGENYQETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWATKMLESCSSQGPGARDPCSLFVLRVTEILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCEGSDNHDSTFEHNIQSLLDLMGDTLEPDAEEGENGCRQFSEPDAGGGQEDAGDSDFLSDEESGEAPVVSHYVQVMNVPCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGEIRTKPPAWCAGAGESKGADTDTPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSKPRIPRTPAGSISVSDPL 2778 M AVNLWRRSDPLLVRLLLRPVEGATHAAENER R PSWDDFSTTGN+FSDAP PRSR L+GSGNGGCPP+MAGESKLA S NA VGRPSYDRPYEVVAQEHQSERESSKNKIG GV CGQGSDGF GSPEAPGGV+QQRQRQPLLRSDSDRAILGRVDYGAVK DL RLAEEV EGKVDLRRNPGVSSA GVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFD+RSTEAGGKGGGGRG+STLLGVLLRLGVRPSPPSLPSAESHEAKQQPSHE K+ AQA EEAGNTE DGAKRVS GTKEE PRWEEFGGDPGRLV DYTVRLLSALVSMSKAR Y+LGE+CEETIE LAELL GENY+ETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWA KML SCSSQGPGARDPC LFVLRVT ILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGARE RERAL MGMDALLQNLGSCEGSDN+DS FEHNIQSLLDLMGDTL+PDAEEGE+G RQ SE GGGQEDAGDSDFLSDEESGEAPVVSHYVQV N PCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCG IRTK PA C GAGESKGA+ TPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQS+PRIPRTPAGSISVSDPL Sbjct: 1 MDAVNLWRRSDPLLVRLLLRPVEGATHAAENERRPRIPSWDDFSTTGNNFSDAPRVPRSRPLDGSGNGGCPPRMAGESKLAPSHSNAVVGRPSYDRPYEVVAQEHQSERESSKNKIGSGVGCGQGSDGFVLGSPEAPGGVQQQRQRQPLLRSDSDRAILGRVDYGAVKHDLWRLAEEVYEGKVDLRRNPGVSSASGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDIRSTEAGGKGGGGRGVSTLLGVLLRLGVRPSPPSLPSAESHEAKQQPSHEPKHT---AQAPEEAGNTE------DGAKRVSSGTKEENPRWEEFGGDPGRLVADYTVRLLSALVSMSKARSYMLGEKCEETIEILAELLSGENYRETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLLSCSSQGPGARDPCPLFVLRVTGILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGAREGRERALEMGMDALLQNLGSCEGSDNNDSAFEHNIQSLLDLMGDTLDPDAEEGEDGRRQLSES-GGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKAPARCPGAGESKGANNHTPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSDPL 705
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A6H5KFS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS9_9PHAE) HSP 1 Score: 1167 bits (3019), Expect = 0.000e+0 Identity = 659/948 (69.51%), Postives = 682/948 (71.94%), Query Frame = 1 Query: 109 LLRDRLGKSDETLEGSEGGRRRRSLCGDEGRDRGHQTTSTGSIALFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAK--------------------------------------------SMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAVNLWRRSDPLLVRLLLRPVEGATHAAENERGHRFPSWDDFSTTGNSFSDAPGAPRSRNLNGSGNGGCPPQMAGESKLAHSRGNAAVGRPSYDRPYEVVAQEHQSERESSKNKIGGGVCCGQGSDGFAQGSPEAPGGVRQQRQRQPLLRSDSDRAILGRVDYGAVKRDLRRLAEEVAEGKVDLRRNPGVSSAGGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTEAGGKGGGGRGISTLLGVLLRLGVRPSPPSLPSAESHEAKQQPSHERKYMSESAQAREEAGNTEGKLGQSDGAKRVSLGTKEETPRWEEFGGDPGRLVTDYTVRLLSALVSMSKARCYVLGE----------------------------------------------------------------------------RCEETIETLAELLRGENYQETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWATKMLESCSSQGPGARDPCSLFVLRVTEILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCEGSDNHDSTFEHNIQSLLDLMGDTLEPDAEEGENGC----RQFSEPDAGGGQEDAGDSDFLSDEESGEAPVVSHYVQVMNVPCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGEIRTKPPAW 2580 L DRLGKSDETLEG EGGRRR SLCGD+GRDRGHQTTSTGS+ALFKAFDDGDMSAFLSAWAAFIP LRRGTPS+LAREVRV EFLACVHCAVLPFRATALAKAAGPREASVACAK SMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFE LFE+TW+ASLKT+IENLM AVNLWRRSDPLLVRLLLRPVEGATHAA+NERG RFPS DDFSTTG++FSDAPG P+SR LN SGNGGCPP+MAGESKLA S NA VGRPSYDRPYEVV Q+HQSERESSKNKIG GV CGQ S G +GSPEAPGGV+QQRQRQPLLRSDSDRAILGRVDYGAVKRDLRRLAEEV+EGKVDLRRNPGVSSAG VN+D ATAAINAAL+LQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTE G K D AKRVSLG KEE RWEEFGGDPGRLV DYTVRLLSALVSMSKAR Y+LGE CEETIETL ELL GE YQ+TSLAKRLLGVLERLSRRRSAQEAIASSSFVDWA KMLESCS QG G R PC LFVLRVT+ILGN SG VSGRTAALAASPDLLRSFGNLLEHDDAQVR SAVRGLKLLLGAREARERAL MGMDALLQNLGSCEGSDN DS FEHNIQ + + DT+ G G GGGQEDAGDSDFLSDEESGEAPVVSHYVQV N PCGEKLLRERYRLSTAEAKEEAIACSSGGA WGGEEEELVCG IRTKPPAW Sbjct: 3 LSLDRLGKSDETLEGFEGGRRR-SLCGDDGRDRGHQTTSTGSVALFKAFDDGDMSAFLSAWAAFIPKTLRRGTPSSLAREVRVVEFLACVHCAVLPFRATALAKAAGPREASVACAKVMVFLTCKRHHKEPLVRCHRGPRMFSLFCFNAATYCSMFGLDSQSMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFEALFEETWAASLKTKIENLMDAVNLWRRSDPLLVRLLLRPVEGATHAADNERGPRFPSCDDFSTTGSTFSDAPGVPKSRTLNDSGNGGCPPRMAGESKLAPSHSNAVVGRPSYDRPYEVVGQKHQSERESSKNKIGSGVGCGQVSGGSVRGSPEAPGGVQQQRQRQPLLRSDSDRAILGRVDYGAVKRDLRRLAEEVSEGKVDLRRNPGVSSAGSVNKDAATAAINAALVLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTEVGVK-----------------------------------------------------------------DSAKRVSLGPKEENLRWEEFGGDPGRLVADYTVRLLSALVSMSKARSYMLGEVRNEELSYSDLSRGHLSPCAISALLVVFQRAARPREELEIPLPWPRVPAGVGRWYGKRTSQMWPHAVDEKLRGCGPLCEETIETLVELLSGEKYQKTSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLESCSFQGAGTRHPCPLFVLRVTDILGNVSGRVSGRTAALAASPDLLRSFGNLLEHDDAQVRASAVRGLKLLLGAREARERALEMGMDALLQNLGSCEGSDNSDSAFEHNIQVKREQVIDTV------GGGGILWAVNGIHAEVTGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGATWGGEEEELVCGGIRTKPPAW 878
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: D7G1W2_ECTSI (Similar to F59G1.4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W2_ECTSI) HSP 1 Score: 385 bits (988), Expect = 8.560e-125 Identity = 195/203 (96.06%), Postives = 200/203 (98.52%), Query Frame = 1 Query: 1 MIQSFEDLDEAVAEYLERRRFANTLECFRSEIRHRTLLRDRLGKSDETLEGSEGGRRRRSLCGDEGRDRGHQTTSTGSIALFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSAS 609 MIQSFED+DEAVAEYLERRRFANTLECFRSEIRHRTLLRDRLGKSDETLEGSEGGRRRRS CGDEGRDRGHQTTSTGS+ALFKAFDDGD+SAFLSAWAAFIPNILRRGTPS+LARE+RVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFE LFEDTWS S Sbjct: 1 MIQSFEDIDEAVAEYLERRRFANTLECFRSEIRHRTLLRDRLGKSDETLEGSEGGRRRRSGCGDEGRDRGHQTTSTGSVALFKAFDDGDLSAFLSAWAAFIPNILRRGTPSSLARELRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLDRAQDVPRVPDLSGYYALPHVPDPSVHPSFEALFEDTWSVS 203
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: UPI0015CFA38F (lisH domain-containing protein ARMC9 isoform X2 n=2 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015CFA38F) HSP 1 Score: 102 bits (253), Expect = 2.200e-18 Identity = 108/392 (27.55%), Postives = 156/392 (39.80%), Query Frame = 1 Query: 241 LFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAVNLWRRSDPLLVRLL-LRPVEGATHAAENERGHRFPSWDDFSTTGNSFSDAPGAPRSRNLNGSGNGGCPPQMAGESKLAHS---RGNAAVGRPSYDRPYEVVAQEHQSERESSKNKIGG-----GVCC----GQGSDGFAQGSPEAPGGVRQQRQRQPLLRSDSDRAILGRVDYGAVKRDLRRLAEEVAEGKVDLRRNPGVSSAGGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTE 1374 L +FDDGDM F WA +P +R P+ VR EF +H A+ P + + R+ + MS FR YL+ R + + +YALP VP+P+VHPSF+ LF+D+W+ LK R+E L+ A+ L + P L+ L+ L V+ A EN+ S+ ++ Q+A K A S R N Y V A+ S + K+ GVC GQ AQ G R + D +L +DY +K+DL G L+ ALLLQ +RWR +R+ G+ R VL I ND+ D +T+ Sbjct: 70 LLSSFDDGDMKVFFELWAEHVPEDIRDNDPA-----VRKLEFYLHIHFAIYPLKNSL------GRQEKAEIGEQMSQFRHYLETRGAALSHTTEFLPFYALPFVPNPAVHPSFQELFQDSWTPDLKKRLEKLL-ALTLKASATPRLLTLVSLAAVQQRDSAKENKES------------------------SKQVHA--------QLAEAEKRAASYTRRFNRMQA--DYHNLIGVTAELVDSLEATVSGKMISPEYLQGVCIRLFNGQMRQSAAQSIDFTRPGTASSMLRASIAAQPKDVPLLPSLDYEKLKKDL-------VTGSDRLK----------------------ALLLQALRWRLTRSLQGEQRDTVLQAFISNDLLDSHTTK 386
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A4W4FQ01_ELEEL (LisH domain-containing protein ARMC9 n=2 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4FQ01_ELEEL) HSP 1 Score: 98.2 bits (243), Expect = 2.460e-17 Identity = 102/386 (26.42%), Postives = 152/386 (39.38%), Query Frame = 1 Query: 241 LFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAVNLWRRSDPLLVRLLLRPVEGA--THAAENERGHRFPSWDD-FSTTGNSFSDAPGAPRSRNLNGSGNGGCPPQMAGESKLAHSRGNAAVGRPSYDRPYEVVAQEHQSERESSKNKIGGGVCC----GQGSDGFAQGSPEAPGGVRQQRQRQPLLRSDSDRAILGRVDYGAVKRDLRRLAEEVAEGKVDLRRNPGVSSAGGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTE 1374 L +FDDGDM F WA +P +R P+ VR EF +H A+ P + + R+ + MS FR YL+ R + + +YALP VP+P+VHPSF+ LF+D+W+ LK R+E L+ A+ L + P L+ L E + HA E R S+ F+ + + G ++L S G+ +++ E+ GVC GQ AQ G R + D +L +DY +K+DL G L+ ALLLQ +RWR +R+ G+ R VL I ND+ D +T+ Sbjct: 50 LLSSFDDGDMKVFFELWAEHVPEDIRDNDPA-----VRKLEFYLHIHFAIYPLKNSL------GRQEKAEIGEQMSQFRHYLETRGAALSHTTEFLPFYALPFVPNPAVHPSFQELFQDSWTPDLKKRLEKLL-ALTLKASATPRLLTLAKENKESSKQVHAQLAEAEKRAASYTRRFNRMQADYHNLIGV--------------------TAELVDSLEATVSGK--------MISPEYLQ-----------GVCIRLFNGQMRQSAAQSIDFTRPGTASSMLRASIAAQPKDVPLLPSLDYEKLKKDL-------VTGSDRLK----------------------ALLLQALRWRLTRSLQGEQRDTVLQAFISNDLLDSHTTK 355
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A3Q3JNP3_MONAL (LisH domain-containing protein ARMC9 n=9 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3JNP3_MONAL) HSP 1 Score: 82.0 bits (201), Expect = 3.530e-12 Identity = 121/464 (26.08%), Postives = 181/464 (39.01%), Query Frame = 1 Query: 19 DLDEAVAEYLERRRFANTLECFRSEIRHRTLLRDRLGKSDETLEGSEGGRRRRSLCGDEGRDRGHQTTSTGSIALFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAVNLWRRSDPLLVRLLLRPVEGATHAAENERGHRFPSWDDFSTTGNSFSDAPGAPRSRNLNGSGNGGCPPQMAGESKLAHSRGNAAVGR---PSYDRPYEV---VAQEHQSERESSK-NKIGGGV----CCGQGSDGFAQGSPEAPGGVRQQRQRQ-PLLRSDSDRAILGRVDYGAVKRDLRRLAEEVAEGKVDLRRNPGVSSAGGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRST 1371 DL + EYL+ F T+ F E + R G+ L+GS G + + D L ++FDDGD F W IP+ ++ EV+ EF +H + P R R + +S F++YL+ R + ++ + YYALP VP+P+VHPSF+ LF+D+W LK ++E + V L S P L+ L A + + S ++ F+ NL G + L S G+ P Y + V +Q QS +S+ + G G C DG+A A + QR ++ P+L S +DY +K+DL EG LR +LLLQ +RWR +R+ PG+ R VL I ND+ D ST Sbjct: 35 DLLGMIKEYLQFEEFEETVHSFDRECKRR-------GRVIPKLQGSTGDSKTHEIKKD----------------LLRSFDDGDQKVFFELWTENIPSEVKNKDG-----EVQSLEFYLYIHFTIYPLRTHP------GRHDQAEFEERISHFKQYLETRGAALSQIAEFLPYYALPFVPNPTVHPSFKGLFQDSWIPHLKDKLEQFLS-VTLKLSSSPRLLSLYKEGGRSIKEAMQQLQLQLVQSERRMASYVRKFNKMQAD--YHNLIGI-----------TADLVDSLEATVSGKMISPEYLQTVCVRLFSSQMRQSVVQSTDFTRPGTGYYSMSAC---DDGYASSMLRAS--IAPQRSKEVPMLPS---------LDYEKLKKDL-------VEGSDRLR----------------------SLLLQALRWRLTRSLPGEQRDMVLQAYISNDLLDHYST 407
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A3B4BX40_PYGNA (LisH domain-containing protein ARMC9-like n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=A0A3B4BX40_PYGNA) HSP 1 Score: 80.5 bits (197), Expect = 6.210e-12 Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 241 LFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAV 645 L +F+DGDM F WA +P +R P+ V+ EF +H + P + + R+ + +S FR YL+ R + + + +YALP VP+P+ HPSF+ LF+D+W+ L+ R+E L+ + Sbjct: 70 LISSFEDGDMKVFFELWAEHVPTDIRDSDPA-----VQKLEFYLHIHFVIYPLKNSL------GRQDKAELDERISHFRHYLETRGAALSQTTEFLPFYALPFVPNPAAHPSFQELFQDSWAPDLRKRLEKLLSLI 194
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A8B9L1G1_ASTMX (LisH domain-containing protein ARMC9 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9L1G1_ASTMX) HSP 1 Score: 79.7 bits (195), Expect = 1.440e-11 Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 241 LFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAVNLWRRSDPLLVRLLLRPVEGATHAAENE 729 L +FDDGDM F WA +P +R P+ V+ EF +H + P ++ R+ + +S F+ YL+ R + + + +YALP VP+P+VHPSF+ LF+D+W+ L+ ++E + + S LL L+ ++ AE + Sbjct: 62 LISSFDDGDMKVFFELWAENVPVDIRDSDPN-----VQKLEFYLHIHFVIYPLKSNV------GRQDKADFDERISHFKHYLETRGAALSQTTEFLPFYALPFVPNPAVHPSFQELFQDSWAPDLRKKLEKFLTTILTSLSSPRLLSLYSLKQMQAQLAEAEKK 214
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A8B9KYP5_ASTMX (LisH domain-containing protein ARMC9 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9KYP5_ASTMX) HSP 1 Score: 79.0 bits (193), Expect = 2.660e-11 Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 241 LFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAVNLWRRSDPLLVRL 684 L +FDDGDM F WA +P +R P+ V+ EF +H + P ++ R+ + +S F+ YL+ R + + + +YALP VP+P+VHPSF+ LF+D+W+ L+ ++E + + L S P L+ L Sbjct: 62 LISSFDDGDMKVFFELWAENVPVDIRDSDPN-----VQKLEFYLHIHFVIYPLKSNV------GRQDKADFDERISHFKHYLETRGAALSQTTEFLPFYALPFVPNPAVHPSFQELFQDSWAPDLRKKLEKFLTTI-LTSLSSPRLLSL 198
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Match: A0A8B6ZWZ4_ORYAF (LisH domain-containing protein ARMC9 n=1 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B6ZWZ4_ORYAF) HSP 1 Score: 78.6 bits (192), Expect = 3.460e-11 Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 241 LFKAFDDGDMSAFLSAWAAFIPNILRRGTPSALAREVRVAEFLACVHCAVLPFRATALAKAAGPREASVACAKSMSSFRRYLD-RAQDVPRVPDLSGYYALPHVPDPSVHPSFEVLFEDTWSASLKTRIENLMGAV 645 L AFD GD AF S W IP+ +R G P LA+++ EF +H A+ L K++ R + MS F+ +L+ + + + + YYALP VP+P+VHPSF+ LF+D+W+ LK ++E + + Sbjct: 62 LVAAFDSGDQKAFFSQWEEHIPSSVRDGDP--LAQKL---EFYLHIHFAIY------LLKSSLGRPDKEELDERMSYFKTFLETKGTAMSQTTEFLPYYALPFVPNPTVHPSFKELFQDSWTPELKLKLEKFLALI 186 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17519.1 >prot_E-siliculosus-1a_M_contig95.17519.1 ID=prot_E-siliculosus-1a_M_contig95.17519.1|Name=mRNA_E-siliculosus-1a_M_contig95.17519.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=927bp MIQSFEDLDEAVAEYLERRRFANTLECFRSEIRHRTLLRDRLGKSDETLEback to top mRNA from alignment at E-siliculosus-1a_M_contig95:482881..493026+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17519.1 ID=mRNA_E-siliculosus-1a_M_contig95.17519.1|Name=mRNA_E-siliculosus-1a_M_contig95.17519.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=10146bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:482881..493026+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:482881..493026+ >mRNA_E-siliculosus-1a_M_contig95.17519.1 ID=mRNA_E-siliculosus-1a_M_contig95.17519.1|Name=mRNA_E-siliculosus-1a_M_contig95.17519.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5562bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:482881..493026+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |