Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17513.1 vs. uniprot
Match:
D7G1V6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V6_ECTSI)
HSP 1 Score: 277 bits (708), Expect = 1.920e-85
Identity = 140/153 (91.50%), Postives = 143/153 (93.46%), Query Frame = 2
Query: 539 MREALLAALGGISQDQFFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMVCFLIYYGYNDLWAVFIPSCLSLVCMCYLIGLKAYLEVMKPKRTVATQMINDLLRDDD-GLDXXXXLDRPLLGGASEEKNGEDEFIAYTAPG 994
MREALLAALGGISQDQ FRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGM+CFLIYYGYN LWAVF+PSCLSLVCMCYLIGLKAYLE MKPKRTVATQMINDLLRDDD G D LDRPLLGGASEEK G+DEFIAYTAPG
Sbjct: 1 MREALLAALGGISQDQLFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMICFLIYYGYNGLWAVFVPSCLSLVCMCYLIGLKAYLEEMKPKRTVATQMINDLLRDDDDGFDDLDGLDRPLLGGASEEKKGDDEFIAYTAPG 153
BLAST of mRNA_E-siliculosus-1a_M_contig95.17513.1 vs. uniprot
Match:
D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)
HSP 1 Score: 76.3 bits (186), Expect = 7.380e-13
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 2
Query: 581 DQFFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMVCFLIYYGYNDLWAVFIPSCLSLVCMCYLIGLKAYLEVMKPKRTVA 859
D + G GG ++A + +PQ+Y VT R K+ DIS+ YQ +F G+V FL++YGY +LW +F P+ S++ YL LK LE + T A
Sbjct: 3 DTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLERCPRRHTAA 95
BLAST of mRNA_E-siliculosus-1a_M_contig95.17513.1 vs. uniprot
Match:
D7G1V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V3_ECTSI)
HSP 1 Score: 74.7 bits (182), Expect = 2.770e-12
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 2
Query: 572 ISQDQFFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMVCFLIYYGYNDLWAVFIPSCLSLVCMCYLIGLKAYLEV--MKPKRTV--ATQMINDLLRDDDGLDXXXXLDRPLL 934
++ D + G +GGL++A A +PQ+ V +R +S DISY + +F GG+V FL YYGY +LW VF P+ LS+ L+ LK LE ++P+ V A+ ++ D D + + +PL+
Sbjct: 1 MASDVPYNLMGASGGLIVAFAFVPQLARVIRRKQSADISYAHLMVFVGGLVMFLAYYGYYELWEVFFPALLSMSFAILLLALKIRLEEFPLRPRAAVPGASVVVGDTSGDGERMANTSSDAQPLM 125
BLAST of mRNA_E-siliculosus-1a_M_contig95.17513.1 vs. uniprot
Match:
A0A6H5KU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU65_9PHAE)
HSP 1 Score: 73.6 bits (179), Expect = 7.010e-12
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 2
Query: 572 ISQDQFFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMVCFLIYYGYNDLWAVFIPSCLSLVCMCYLIGLKAYLEV--MKPKRTVA 859
++ D + G GGL++A A PQ+ V +R +S DISY + +F GGMV FL+YYGY +LW +F PS +S+ + L+ K +E ++P+ A
Sbjct: 1 MTSDVPYNLMGVCGGLIVACAYAPQLARVIRRKQSADISYTHLMVFMGGMVMFLVYYGYYELWELFFPSLISMSFVILLLAAKIRMEEFPLRPRAAAA 98
BLAST of mRNA_E-siliculosus-1a_M_contig95.17513.1 vs. uniprot
Match:
A0A3R7HBR8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HBR8_9STRA)
HSP 1 Score: 55.1 bits (131), Expect = 1.850e-5
Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 2
Query: 581 DQFFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMVCFLIYYGYNDLWAVFIPSCLSLVCMCYLIGLKAYLE 832
+ + G G L++ A +PQI V + ++DIS ++QF+FA G++C IY LW ++IPS L L+ L+ +K Y +
Sbjct: 5 ETLYDTLGLVGSFLVSAALVPQILKVYRSKSAKDISSVFQFVFAVGVLCITIYGLGEGLWPIWIPSTLELLAGIILLVMKHYYD 88
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17513.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 5
0 1 Expect = 1.92e-85 / Id = 91.50 Expect = 7.38e-13 / Id = 40.86 Expect = 2.77e-12 / Id = 36.00 Expect = 7.01e-12 / Id = 38.78 Expect = 1.85e-5 / Id = 34.52 Sequence D7G1V6_ECTSI D7G1V2_ECTSI D7G1V3_ECTSI A0A6H5KU65_9PHAE A0A3R7HBR8_9STRA back to top
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936519.2147613-UTR-E-siliculosus-1a_M_contig95:438066..439455 1622936519.2147613-UTR-E-siliculosus-1a_M_contig95:438066..439455 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 438067..439455 - 1696251114.2737322-UTR-E-siliculosus-1a_M_contig95:438066..439455 1696251114.2737322-UTR-E-siliculosus-1a_M_contig95:438066..439455 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 438067..439455 - 1622936519.2778692-UTR-E-siliculosus-1a_M_contig95:441086..441624 1622936519.2778692-UTR-E-siliculosus-1a_M_contig95:441086..441624 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 441087..441624 - 1696251114.3196774-UTR-E-siliculosus-1a_M_contig95:441086..441624 1696251114.3196774-UTR-E-siliculosus-1a_M_contig95:441086..441624 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig95 441087..441624 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936519.2312098-CDS-E-siliculosus-1a_M_contig95:439455..439758 1622936519.2312098-CDS-E-siliculosus-1a_M_contig95:439455..439758 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 439456..439758 - 1696251114.2896292-CDS-E-siliculosus-1a_M_contig95:439455..439758 1696251114.2896292-CDS-E-siliculosus-1a_M_contig95:439455..439758 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 439456..439758 - 1622936519.245878-CDS-E-siliculosus-1a_M_contig95:440145..440216 1622936519.245878-CDS-E-siliculosus-1a_M_contig95:440145..440216 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 440146..440216 - 1696251114.2982998-CDS-E-siliculosus-1a_M_contig95:440145..440216 1696251114.2982998-CDS-E-siliculosus-1a_M_contig95:440145..440216 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 440146..440216 - 1622936519.2595768-CDS-E-siliculosus-1a_M_contig95:440995..441086 1622936519.2595768-CDS-E-siliculosus-1a_M_contig95:440995..441086 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 440996..441086 - 1696251114.3077998-CDS-E-siliculosus-1a_M_contig95:440995..441086 1696251114.3077998-CDS-E-siliculosus-1a_M_contig95:440995..441086 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig95 440996..441086 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17513.1
>prot_E-siliculosus-1a_M_contig95.17513.1 ID=prot_E-siliculosus-1a_M_contig95.17513.1|Name=mRNA_E-siliculosus-1a_M_contig95.17513.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=155bp
MREALLAALGGISQDQFFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDIS back to top mRNA from alignment at E-siliculosus-1a_M_contig95:438067..441624-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17513.1 ID=mRNA_E-siliculosus-1a_M_contig95.17513.1|Name=mRNA_E-siliculosus-1a_M_contig95.17513.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3558bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:438067..441624- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)CACACCAAAGCTGCACCGAAGTAACGCCCCAAGTGTTGCTCCCCTTCTGA
GTCTCGCGGCCACCCGGACACACACGTGGGTCGTAAAACGAGTGCGTCGG
GTGCCTTGTTTTGAATCGCAGACAGCTGCGTTGTGCATACACGGCAGCAG
CAGTAGCACACGGCCTTTGGCCGACTATCGAGCACCGTCTGGTCCTGCGA
GCGGCATACCTCTGAAGCGGTATTGCTCAGAAGCTTGCCTCATCATCGCC
CGCTGTGTTCGTTGGTGTGCTGGACCCGGATATCACGCCTGCTCTGGACA
TCGAGAAGAGGAAGGCAAGGAGGAGGACGAGAACGCCACGTGGGATCATA
CTGCTGCTGTCGTGTTGGTGTACACCAACACGGAGAGCAGCACAGCAGTA
CTGTAATAGCATCAGAGGGGACACCACGACAGAAGCCTTCCCACGTGCTA
ACCTCACCGGCTGTTGGTACCATTGGAGCAGCTCTGTGCTGGAGTACCGA
AGGGCCTGGAGAGCGCACGGACAACCAAGACCTCCACG ATGCGTGAAGCC
CTTCTTGCGGCGTTGGGGGGCATCTCCCAAGACCAGTTTTTCAGAGCTTG
CGGGACGGCGGGCGGACTGCTTCTCGCCG GTACGGATAACATGATGAATA
TGACCGACCGTTAATCTCGAATTGCTTGCCAAATAGGCTGCTGCCACGTG
TTCGCTGCGCAGTGTTTTGCCTCTGTTGTGTCTCTCCTCTTTCGAGCTCG
TTCCTATTTTCCGGTTGGAAATGATCTACCCAGTTTGTTGGTACAACCGC
CGCGTCTCTCAAATCGATGCAGCAGAGGATCATGATTCCACGACAAGTGT
GGCGTGCTCATCTGATCCGTCGCATGGAACACCGGAGTGTGTCCAGCGGT
CTATCCCGTGTAAGGTTTACGGGCCTTACTGCTCGTGTTGTAAGTATAGA
TTAGTCGATACCGTAGGTGACATGACACAAGATACCCCCTGGACCGATTT
TCAAAGCTCGATTACTCCACGACGAACAGGATGCCAAAAACCAAACGATA
CGCTTATCGGACCGAATCTCAACGATATGGTTCCAACGCCGCCGTTTAGG
CAGCACCACTCTCCGCTGCTGTGGAGTATTCGCTCTTTGAAAGTCGGTCC
AGGAGGTGTGATATCTTGTGTCACCTACATATATATCTGTGGAAATCGAG
GTCTAGGATGGTTTCGGTTGAGTCGGCATTGTTGCTTGGGTTCCGTGATA
ACACGGTGTGTATTGTGAACCTTCGTTTGCAGGGAACCTTGCTGACGTGT
GTTCCGTGTACGGTTCTCGTTTCATGCCTTGCCTATGTACCCCTCGAAGC
TGATGTCTACGTAACCCTACCTCCCCCGTTTTCTGTGCCCCCCCCTTCAA
CGAAACAGGAGCACAGTTGCCACAGATTTACCATGTCACGAAGCGAGGGA
AGTCTCGGGACATCAGCTACATGTACCAG GTGCGACGAAGCAGTAGGAGC
AGAACGCGCCAGCACTCCAAGGACACAGTAGCTGGGCTGTCTCTTGCTCC
TCACTATCGCCATCACGGAGGGTGCGTCGAGGAGCGGGGCTGGAGACTAC
AGTAGTGCGAGGTCTCCCTTGCGTGCAGCATGTGTTTTGCTTACGTTTTT
TTTTCTCTCTCCAAAGTATACACCATGGGTTCGCCTCTGCCAGGACGACG
GCCTAGCAACAATCAGGTTTGAACAGCCACCCCCAACCCCTTCTCCACCC
GTCATTCCTCGCAATCGACAGAAATGAACACCCGCCCTTTACCCATACCC
GTTTGTCTGTTCCGCCACCACCACCCCTTATCTTGTGCTGTATCTCCCTC
CCTCTCTCTCTGGCAGTTCATTTTCGCAGGCGGGATGGTCTGCTTCCTCA
TCTACTACGGCTACAACGACCTCTGGGCGGTGTTCATCCCGTCCTGCTTG
TCCCTCGTCTGCATGTGCTACCTCATCGGCCTCAAGGCCTACCTGGAGGT
GATGAAGCCCAAGCGCACCGTCGCGACGCAGATGATCAACGACCTTCTGC
GAGACGACGATGGCCTCGACGGCCTCGACGGCTTGGATCGCCCGCTGCTC
GGCGGGGCATCCGAGGAGAAGAATGGGGAAGACGAGTTTATCGCCTACAC
GGCACCGGGGGGCAAATAA ACTATTTAGAAAGGCGTTGGTTCTTTGGCGG
GGGGAGGGTGCTCGCCGTTGCCATTTTGCCGTTGGTCACCCACCTCTCTT
ACGAAAGGGAGCACCGTTCGCCGTTCCTTTGGGGGGAGGAATGTGTAGAG
GCGTTGTTGATACGTGGCGAGGCGAGAAGGTGTGGGCGCGGCAGCACGTT
GTTGGGAGGCGGCAACGGCACTTTGCCCGGAACGGCGGCCCCGAGATGAT
GTGTCCATTGCTAGACGGCAACATTCACGGCAGCCATGGAACGCCCGCCT
GCTAGGCCTAGCGGGAGAAAAGTAGCCACCGGGGACACACGGTGAAAGGA
AGGTTGACGGGAAGACGAGCAGTGCCAGCAGCGGGGCCTGGTGCCCCGGG
GGACGGGCTAGGTAATAACCAGTCCTACGTCGAGCCATCACGTGCTGTCC
CCCGGGAAATATGGCGAGAGGAACAACGCGTCGCAGCCTTTGGAATAGGC
ATGGCTCCGCGAAATGGGTTGCCACGTTGCCACGCGATCGGGGAGGAGAG
GGGCAAGGCGGCGGGCGACATTGCACCCTCGGAGATGTTTTAGCGCCTCA
CACACGGCTCACGGCTGCAGTCACCGCGCAGTACAGAAGCTTGTTTTTTG
TCGCTGCCCCGCGTAGTTTTCCTGCAACGTGAACCCGACCTTCCTGCCAC
AAGGCTTTGCGTTGCGAAACGCACAGGATGCAGACGCGGGTTCCACGACA
CGGTGTGCTATAAACTATGTGGTAGCGATGATGACAGCGATATCGCAATT
TCTCGATAGTCCAGGAGCCAGCGTGTTGCTGTGGGCCCCGAGCAATGCCG
ACCGAGCATTGCACGTCGAATCGGTTGACTGACAATGCTTTCCGTCACGT
TCTGAAACCACGGAGCCCCCCCCCGCTGAATGTAGCGTTTCAGGCGAAGT
ATGTGTTTTTGGGTTGGGGTTGTTCGTGCATTGGGTCCGGACCTCTCTTT
CGGCCGGCAAGGATAAGGATCGGAGGAGGTTGGGGGTGTCATCTATTTTG
CTGTTGTTGTGGAAGCTACTTTTGTCGTGTCTCCTGTTGCCTTTTGTGCA
CGACCATACAGCTTGTTTCTGTGCTTTTCCATTTTTCTCTTCTTTGTGGC
GTGTTCGAAAGACCATGCGGTCCCTCTGGTGCTTCATGTTACGGCAGAAT
ACGGGAGTCAAGCGGCAAGAACAGTCGTGAGTCTTGCTGTATGGCATGCG
CCACCTTTGCCGGTGCGCACCGACAGACTTGCGGCAGAGGCGCAACTCGT
GCGTGGTGGCAGCAGTGTCGTTATTTTTGTTGTTGTGCCCGATTGTTGAA
TGGACTGAAAAAATAAATCGCAAGTGTTTGAATATGTCAACGACTCGGCA
GCGACCAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:438067..441624-
>mRNA_E-siliculosus-1a_M_contig95.17513.1 ID=mRNA_E-siliculosus-1a_M_contig95.17513.1|Name=mRNA_E-siliculosus-1a_M_contig95.17513.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=930bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:438067..441624- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top