Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 333 |
| Model size | 335 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936509.1208637-CDS-E-siliculosus-1a_M_contig95:294876..295209 | 1622936509.1208637-CDS-E-siliculosus-1a_M_contig95:294876..295209 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 294877..295209 + |
| 1696251110.0486434-CDS-E-siliculosus-1a_M_contig95:294876..295209 | 1696251110.0486434-CDS-E-siliculosus-1a_M_contig95:294876..295209 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 294877..295209 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17497.1 >prot_E-siliculosus-1a_M_contig95.17497.1 ID=prot_E-siliculosus-1a_M_contig95.17497.1|Name=mRNA_E-siliculosus-1a_M_contig95.17497.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=111bp
MDVAKLRAEKSDGSMYRMRRMNRACMATQLNRRGSGKTRARSHNVLFNQK
KSLLQSAGRLPRLSRAGTTESRRVTQDKQNRTQARLPHQIKMSLTVSPDS
GGGSENPASAS back to topmRNA from alignment at E-siliculosus-1a_M_contig95:294877..295209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig95.17497.1 ID=mRNA_E-siliculosus-1a_M_contig95.17497.1|Name=mRNA_E-siliculosus-1a_M_contig95.17497.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=333bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:294877..295209+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGACGTGGCCAAACTGCGAGCGGAAAAAAGCGACGGGTCAATGTATCG
GATGCGGAGAATGAACCGGGCATGTATGGCAACGCAGTTAAACCGTCGAG
GGTCGGGAAAAACAAGAGCTCGTTCTCACAACGTGCTATTCAACCAAAAA
AAATCGTTGTTGCAGAGCGCTGGGCGGCTGCCGCGCCTCTCAAGAGCGGG
GACGACAGAGAGCCGCCGCGTAACACAAGACAAACAAAACAGGACGCAAG
CTCGGCTTCCTCATCAGATCAAAATGTCTCTCACTGTTTCTCCTGACTCC
GGCGGTGGCTCGGAGAACCCGGCATCGGCTTCG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:294877..295209+ >mRNA_E-siliculosus-1a_M_contig95.17497.1 ID=mRNA_E-siliculosus-1a_M_contig95.17497.1|Name=mRNA_E-siliculosus-1a_M_contig95.17497.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=666bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:294877..295209+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGACGTGGCCAAACTGCGAGCGGAAAAAAGCGACGGGTCAATGTATCG
GATGCGGAGAATGAACCGGGCATGTATGGCAACGCAGTTAAACCGTCGAG
GGTCGGGAAAAACAAGAGCTCGTTCTCACAACGTGCTATTCAACCAAAAA
AAATCGTTGTTGCAGAGCGCTGGGCGGCTGCCGCGCCTCTCAAGAGCGGG
GACGACAGAGAGCCGCCGCGTAACACAAGACAAACAAAACAGGACGCAAG
CTCGGCTTCCTCATCAGATCAAAATGTCTCTCACTGTTTCTCCTGACTCC
GGCGGTGGCTCGGAGAACCCGGCATCGGCTTCGATGGACGTGGCCAAACT
GCGAGCGGAAAAAAGCGACGGGTCAATGTATCGGATGCGGAGAATGAACC
GGGCATGTATGGCAACGCAGTTAAACCGTCGAGGGTCGGGAAAAACAAGA
GCTCGTTCTCACAACGTGCTATTCAACCAAAAAAAATCGTTGTTGCAGAG
CGCTGGGCGGCTGCCGCGCCTCTCAAGAGCGGGGACGACAGAGAGCCGCC
GCGTAACACAAGACAAACAAAACAGGACGCAAGCTCGGCTTCCTCATCAG
ATCAAAATGTCTCTCACTGTTTCTCCTGACTCCGGCGGTGGCTCGGAGAA
CCCGGCATCGGCTTCG back to top
|