mRNA_E-siliculosus-1a_M_contig95.17493.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17493.1 vs. uniprot
Match: D7G1T7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T7_ECTSI) HSP 1 Score: 1368 bits (3542), Expect = 0.000e+0 Identity = 765/943 (81.12%), Postives = 784/943 (83.14%), Query Frame = 1 Query: 1 MQSALMAGGLTPALRQLKDCRHTFPSSEWDTRDSQGAPRHGQGCLTCNLAAKVMKSVEREQRAAEDLRRQEEAERELVWARARRDLLLMRHPTNWADCSLLQGPRPERPTELEPNNETGTGDFGAILNDIEKRGRVERRGGDSRPKLVPGAMLTLSNTAVAAVKVFAEEVLAEEDPAQRAKKAAAIVKEATTEVPFANRRNHPRTGVLVTRLQAVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHRVAVPGAPAAAA-GPGRASYAGGIGGGGYRSPACGGDGGEGLFRTWYPPALLKNESLPSPRAAARRVEGERRKREARLALANSLLDDQRAELNRRDARTEQLLALVEVVKLVERAMASLEDAALSCFGTDSEPLAISVKVLHPRGGQPGDGAREAVVSEIMSAWRRIDTQVREQEEAARLRAKRTNDKGTSPKTSPNRGGGVSAKRTPRSGSREGRGKSAGRREAKLSVPTTNENLAAFEQRLLQDSLHEDASEAVASLLQRKRVLGCIHEASRLGRNKKAWEKQSSSPLGLGIQVFPPWALASHRFIALVHRGSLVAVSQASPFVFWENLADRKKTNQLIADILGPFLENPDLLKATFADEPGERASVPATKATSAGRTTTNNAVSTARETPRDGAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----MWGYRSSLSSKGCWKIDARAVARRDSSLKLGFDSVAFDLFVLPDEKKGGRKGGEEPPAAPSVGKQRHATRVKDHEETESSSHRATRAVVTNAVPFRLADGLPRELGPLLFEDTSDASLLAGDAAENHPQSRGAKRRPKHPRVTVSDPELVGSEPEEAEEETEEEHGYGWESKKDPRSAGQILSHTRRGSGPSEAAVEVRILGETLGADQLARAGLPHDLFGLVVDERFKVTNAATAGDSKSTGGRTKGRRKE 2814
MQSALMAGGLTPALRQLKDCRHTFPSS+WDTRDSQGAPRHGQGCLTCN GPRPERPTELEPNNETGTGDFGAILN IE+ GRVER GGDSRPKLVPGAMLT SNTAVAAVK FAEEVLAEEDP +RA KAAAIVKEATTEV FANRRNHPRT VLVTRLQAVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHR AVPGAP AAA PGRASYAGGIGGGGYRSPACGGDGGEGLFRTWYPPALLKNESLPSPRAAARRVEGE RKREARLALANSLLDDQRAELNRRDAR +LLALVEVVKLVERAMASLE+AAL+CFGT SEPLAISVKVLHPRGG+PGDGAREAVV+EIMSAW RID QVREQEEAARLRA+RTNDKG SPKTSPNRGGGVSA+RTPRSGSREGRGKS GRREAKLSVPTTNENLAAFEQ A LL R+RV G G + P G IQVFPPWALASHRFIALVHRGSLVAVSQASPFVFWENLADRKKTNQLIADILGPFLENPDLLKA FADEPGERASVPATKATSAGR+TTNNAVSTARETP DGAGGD XXXXXXXX MWGYRSSLSSKGCWKIDARAVARRDSSLKLGFDSVAFDLFVLPDEKKGG+KGG+EPPAAPSVGKQRHATRV DHEE ESSS RATRAVVTNAVPFRLADGLPRELGPLLFEDTSDASLLAGDAAE+HPQSRGAKR+P+HPRVTVSDPELVGS PEEAEEETEEE GY WE KKDPRSAG+ILSHTRRGSGPSEAAVEVRI GETLGADQLARAGLPHDLF LVVDERFKVTNAATAGDSKST GRTKGRRKE
Sbjct: 1 MQSALMAGGLTPALRQLKDCRHTFPSSKWDTRDSQGAPRHGQGCLTCN------------------------------------------------------GPRPERPTELEPNNETGTGDFGAILNGIEEGGRVERCGGDSRPKLVPGAMLTFSNTAVAAVKAFAEEVLAEEDPPRRATKAAAIVKEATTEVSFANRRNHPRTEVLVTRLQAVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHRAAVPGAPGAAATAPGRASYAGGIGGGGYRSPACGGDGGEGLFRTWYPPALLKNESLPSPRAAARRVEGEGRKREARLALANSLLDDQRAELNRRDARAARLLALVEVVKLVERAMASLEEAALTCFGTGSEPLAISVKVLHPRGGEPGDGAREAVVTEIMSAWHRIDAQVREQEEAARLRAERTNDKGKSPKTSPNRGGGVSARRTPRSGSREGRGKSTGRREAKLSVPTTNENLAAFEQ-------------IAARLLARRRVRGG-------GLSSPEEASARLHPRGFKIQVFPPWALASHRFIALVHRGSLVAVSQASPFVFWENLADRKKTNQLIADILGPFLENPDLLKAAFADEPGERASVPATKATSAGRSTTNNAVSTARETPGDGAGGDGEQSTSSSVAEAGDTGVRQIGRENEEGSXXXXXXXXADGGMWGYRSSLSSKGCWKIDARAVARRDSSLKLGFDSVAFDLFVLPDEKKGGKKGGQEPPAAPSVGKQRHATRVNDHEEDESSSPRATRAVVTNAVPFRLADGLPRELGPLLFEDTSDASLLAGDAAEDHPQSRGAKRKPEHPRVTVSDPELVGSRPEEAEEETEEEEGYEWERKKDPRSAGKILSHTRRGSGPSEAAVEVRIRGETLGADQLARAGLPHDLFSLVVDERFKVTNAATAGDSKSTRGRTKGRRKE 869
BLAST of mRNA_E-siliculosus-1a_M_contig95.17493.1 vs. uniprot
Match: A0A6H5KN18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN18_9PHAE) HSP 1 Score: 734 bits (1895), Expect = 3.140e-255 Identity = 425/570 (74.56%), Postives = 438/570 (76.84%), Query Frame = 1 Query: 1258 QVREQEEAARLRAKRTNDKGTSPKTSPNRGGGVSAKRTPRSGSREGRGKSAGRREAKLSVPTTNENLAAFEQRLLQDSLHEDASEAVASLLQRKRVLGCIHEASRLGRNKKAWEKQSSSPLGLGIQVFPPWALASHRFIALVHRGSLVAVSQASPFVFWENL--------------------------------------------------ADRKKTNQLIADILGPFLENPDLLKATFADEPGERASVPATKATSAGRTTTNNAVSTARETPRDGAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MWGYRSSLSSKGCWKIDARAVARRDSSLKLGFDSVAFDLFVLPDEKKGGRKGGEEPPAAPSVGKQRHATRVKDHEETESSSHRATRAVVTNAVPFRLADGLPRELGPLLFEDTSDASLLAGDAAENHPQSRGAKRRPKHPRVTVSDPELVGSEPEEAEEETEEEHGYGWESKKDPRSAGQILSHTRRGSGPSEAAVEVRILGETLGADQLARAGLPHDLFGLVVDERFKVTNAATAGDSKSTGGRTKGRRKE 2814
+VREQEEAARLRA+RTNDKG SPKTSPNRG GVSA+RTPRSGSREGRGKSAGRREAKLSVPTTNENLAAFEQRLLQDSLHEDASEAVASLLQRKRVLGCIHEASRLGRN+KAW KQSSSP GLG VFPPWALASHRFIALVHRGSLVAVSQASPFVFWENL A+R+KTNQLIADILGPFLEN DLLKA DE G RASVPA +ATSA R TTN AVSTARE P DGAGGD MWGYRSSLSSKGCWKIDARA RRDSSLKLGFDSVAFDLFVLP EK G +KGGEEP AAP KQRHATRV HEE +SSSHRATRAVVTNAVPFRLADGLPRELGPLLF+DTSDASLLAGDAAE HPQSR AKRRP+HP VTVSDPEL GSE EE EEE EEEH YGWESKKDPRSAGQILSHT RGSGPSEAAVEVRI GETL ADQLARAGLPHDLFGLVVDERF VTNAATAGDSKS+GG + RRKE
Sbjct: 5 EVREQEEAARLRAERTNDKGKSPKTSPNRGVGVSARRTPRSGSREGRGKSAGRREAKLSVPTTNENLAAFEQRLLQDSLHEDASEAVASLLQRKRVLGCIHEASRLGRNEKAWGKQSSSPFGLG--VFPPWALASHRFIALVHRGSLVAVSQASPFVFWENLVSECETSDYCIVHAQTHRRKRFNVLVTEYLNISSLWASPLIIVRKNINMKAERRKTNQLIADILGPFLENGDLLKAALEDEQGARASVPANRATSASRATTN-AVSTAREIPGDGAGGDGEQSPSSSVAEAGDTGVRQIGRENEEGSAAAAAADGGMWGYRSSLSSKGCWKIDARAAGRRDSSLKLGFDSVAFDLFVLPHEK-GDKKGGEEP-AAPPERKQRHATRVNGHEEAKSSSHRATRAVVTNAVPFRLADGLPRELGPLLFDDTSDASLLAGDAAEYHPQSRVAKRRPEHPLVTVSDPELDGSELEEVEEEAEEEHEYGWESKKDPRSAGQILSHTHRGSGPSEAAVEVRIRGETLSADQLARAGLPHDLFGLVVDERFNVTNAATAGDSKSSGGVNERRRKE 569
BLAST of mRNA_E-siliculosus-1a_M_contig95.17493.1 vs. uniprot
Match: A0A6H5KM98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM98_9PHAE) HSP 1 Score: 594 bits (1531), Expect = 3.880e-203 Identity = 331/422 (78.44%), Postives = 340/422 (80.57%), Query Frame = 1 Query: 1 MQSALMAGGLTPALRQLKDCRHTFPSSEWDTRDSQGAPRHGQGCLTCNLAAKVMKSVEREQRAAEDLRRQEEAERELVWARARRDLLLMRHPTNWADCSLLQGPRPERPTELEPNNETGTGDFGAILNDIEKRGRVERRGGDSRPKLVPGAMLTLSNTAVAAVKVFAEEVLAEEDPAQRAKKAAAIVKEATTEVPFANRRNHPRTGVLVTRLQAVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHRVAVPGAPAAAAGPGRASYAGG-IGGGGYRSPACGGDGGEGLFRTWYPPALLKNESLPSPRAAARRVEGERRKREARLALANSLLDDQRAELNRRDARTEQLLALVEVVKLVERAMASLEDAALSCFGTDSEPLAISVKVLHPRGGQPGDGAREAVVSEIMSAWRRIDTQV 1263
MQSALMAGGLTPALRQLKDC+HTFPSS+WDTRDSQGAPRHGQGCLTCN+ RH GPRPERP ELEPNNETGTGDF AILN IE G+VERRGGDSRPKLVPGAMLTLSNTAVAAVK FAEEVLAEE+PAQRAKKA AIVKEATTEV FANRRNHPRTGVLV AVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHR AVPGAP A AGPGRASYAGG GG YRSP EGLFRTWYPPALLKNESLPSPRAAARRVEGE RKREARLALANSLLDDQRAELNRRDAR +LLALVEVVKLVERAMASLEDAALSCFGTDSEPLAISVKVLHPRGG+P DGAREAVV+EI+SAW RIDTQV
Sbjct: 1 MQSALMAGGLTPALRQLKDCQHTFPSSQWDTRDSQGAPRHGQGCLTCNV----------------------------------------RH-----------GPRPERPRELEPNNETGTGDFDAILNGIEGGGQVERRGGDSRPKLVPGAMLTLSNTAVAAVKAFAEEVLAEENPAQRAKKALAIVKEATTEVAFANRRNHPRTGVLV----AVVRGWLARRLARVLLLRGGCRRELDVASGAWQYVWSHRAAVPGAPTATAGPGRASYAGGGSGGXXYRSPVXXXXXXEGLFRTWYPPALLKNESLPSPRAAARRVEGEGRKREARLALANSLLDDQRAELNRRDARAARLLALVEVVKLVERAMASLEDAALSCFGTDSEPLAISVKVLHPRGGEPWDGAREAVVTEIISAWHRIDTQV 367 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 3 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17493.1 >prot_E-siliculosus-1a_M_contig95.17493.1 ID=prot_E-siliculosus-1a_M_contig95.17493.1|Name=mRNA_E-siliculosus-1a_M_contig95.17493.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=939bp MQSALMAGGLTPALRQLKDCRHTFPSSEWDTRDSQGAPRHGQGCLTCNLAback to top mRNA from alignment at E-siliculosus-1a_M_contig95:248300..255025- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17493.1 ID=mRNA_E-siliculosus-1a_M_contig95.17493.1|Name=mRNA_E-siliculosus-1a_M_contig95.17493.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6726bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:248300..255025- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:248300..255025- >mRNA_E-siliculosus-1a_M_contig95.17493.1 ID=mRNA_E-siliculosus-1a_M_contig95.17493.1|Name=mRNA_E-siliculosus-1a_M_contig95.17493.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5634bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:248300..255025- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |