Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 342 |
| Model size | 548 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936508.4406998-UTR-E-siliculosus-1a_M_contig95:185173..185298 | 1622936508.4406998-UTR-E-siliculosus-1a_M_contig95:185173..185298 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 185174..185298 - |
| 1696251109.857552-UTR-E-siliculosus-1a_M_contig95:185173..185298 | 1696251109.857552-UTR-E-siliculosus-1a_M_contig95:185173..185298 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 185174..185298 - |
| 1622936508.4643493-UTR-E-siliculosus-1a_M_contig95:185313..185392 | 1622936508.4643493-UTR-E-siliculosus-1a_M_contig95:185313..185392 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 185314..185392 - |
| 1696251109.8658702-UTR-E-siliculosus-1a_M_contig95:185313..185392 | 1696251109.8658702-UTR-E-siliculosus-1a_M_contig95:185313..185392 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 185314..185392 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936508.4808714-CDS-E-siliculosus-1a_M_contig95:185392..185606 | 1622936508.4808714-CDS-E-siliculosus-1a_M_contig95:185392..185606 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 185393..185606 - |
| 1696251109.8741176-CDS-E-siliculosus-1a_M_contig95:185392..185606 | 1696251109.8741176-CDS-E-siliculosus-1a_M_contig95:185392..185606 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 185393..185606 - |
| 1622936508.4976285-CDS-E-siliculosus-1a_M_contig95:186560..186688 | 1622936508.4976285-CDS-E-siliculosus-1a_M_contig95:186560..186688 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 186561..186688 - |
| 1696251109.8823056-CDS-E-siliculosus-1a_M_contig95:186560..186688 | 1696251109.8823056-CDS-E-siliculosus-1a_M_contig95:186560..186688 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 186561..186688 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17483.1 >prot_E-siliculosus-1a_M_contig95.17483.1 ID=prot_E-siliculosus-1a_M_contig95.17483.1|Name=mRNA_E-siliculosus-1a_M_contig95.17483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
GSRWWKEGGGGGGGGGGRCLEGGGETVAGDCSCVRGQRLFPRSGGIRPTR
PLPRNRARGLVPLAGGRGTRSRAAGDRRGAPLRVVDGGGGGGGGGRDRGR
RGRPREHRRQRRR* back to topmRNA from alignment at E-siliculosus-1a_M_contig95:185174..186688- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig95.17483.1 ID=mRNA_E-siliculosus-1a_M_contig95.17483.1|Name=mRNA_E-siliculosus-1a_M_contig95.17483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1515bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:185174..186688- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGAAGCCGTTGGTGGAAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGGG
GAGGTGTCTTGAAGGTGGTGGTGAGACCGTTGCCGGGGACTGCTCCTGCG
TCCGTGGACAGCGGCTCTTCCCGAGGAGGTGTGTGAGAGCGTGTGAGAGT
CGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGA
GAGAGATGTACAGCAGTAGAATCGTGAAGTCGAGGAGTGATTGCGCATCC
CCTTTAGGGTGTGTGTGCTCATAGCCGTGAATGCCGTAGTCACTAGACCA
TGGACGTCGCATCCCTACCGATATGGAGGAGGGGCGTACTCATGCTTTGC
ATGCCTTAGTTATTGGACCATTGACGACGCGTCTTGGAGAGGAGGGCGGA
GCATTGTTCCCACAGTAAAACCGATCACCGGTGCCCAATTCCTTCCTACT
TTGCCCAAGGTGGCTCTAACAATGTGTGTGTGGTGGAGTGAGTTTCGAAG
CTCGATTGCTGGTTCACACCCGAGATAGAGCGAAGACGCGTCGGGACCGA
TTCGTTCACGGCGGGACATACGTATGTGACGTGACGTAAGATATCACACC
CCCTTGACCGATTTTCGGAGCTCGATTACTCCACGACGAAGACGATGGAT
GCCACATCAGTCAAACGAATGGTGCGTTTTCGGAAAGCTCTCGATGAGAC
GGCTCCAATGCCGCTATTTCCGGCACCACTACCGCCACTGTTTCTTCTGT
GGAGTCATCGAGCTTTTAAATCGGCCAATGGTGTGTGATATCTTACGTCA
TGTCGCCTCGGCGGTAGTAGATCGTTCCCAAGACGGCTCGTTTTTTTCCC
GGCAAAGTGCCATCCTATTGAAATTTTGCGGAGCAATCGAGGGTGGGCCA
TGATGAAAATGTGTGTGTGTGTACGACTCTCGCACCGTATTTTTCGGTGC
TTGTGATTTTTGCGGGGCACCGCATCGACCGCTTCACCCACCGAACGTTC
GCGTTCGCCCGTGTCCACCACGGCCGTTCTCGCCCCCTGCCCCGCTGGCG
TGTGATTTGATTCTTCCACAAAACAAAAAAAGCGGCGGAATACGACCGAC
CAGACCTTTGCCAAGAAATCGAGCACGTGGTCTCGTTCCCCTGGCCGGAG
GCCGAGGCACTCGCTCGCGCGCGGCAGGAGACCGCCGAGGCGCTCCGCTC
CGCGTCGTCGACGGCGGCGGGGGCGGCGGCGGCGGCGGTAGGGATCGAGG
GCGGCGGGGGCGACCTCGGGAGCATCGGCGGCAGCGGCGGCGGTAGCGGC
GGCCAGGAAGAGGGACTCTCGGCTGCTGCTGCTGCTGCACCTCCGAGCGA
CAGCCACTTTCAGGCGCCCGCCGCCACCGCCGCCGCCGCCGCACCATTGT
CGCTGTCGTCGCAGTCCTACGGCGGTGGCGGTGCTCGAAGCCCGCCCTCC
TGGGGCGAGAAGGTGGCCGAAACCTAACACATGAGTAGGGAAAGCAGTCG
TTGTCTAGTGTTTGT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:185174..186688- >mRNA_E-siliculosus-1a_M_contig95.17483.1 ID=mRNA_E-siliculosus-1a_M_contig95.17483.1|Name=mRNA_E-siliculosus-1a_M_contig95.17483.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=684bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:185174..186688- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGAAGCCGTTGGTGGAAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGGG
GAGGTGTCTTGAAGGTGGTGGTGAGACCGTTGCCGGGGACTGCTCCTGCG
TCCGTGGACAGCGGCTCTTCCCGAGGAGGGAAGCCGTTGGTGGAAAGAAG
GAGGAGGAGGAGGAGGAGGAGGAGGGGGGAGGTGTCTTGAAGGTGGTGGT
GAGACCGTTGCCGGGGACTGCTCCTGCGTCCGTGGACAGCGGCTCTTCCC
GAGGAGCGGCGGAATACGACCGACCAGACCTTTGCCAAGAAATCGAGCAC
GTGGTCTCGTTCCCCTGGCCGGAGGCCGAGGCACTCGCTCGCGCGCGGCA
GGAGACCGCCGAGGCGCTCCGCTCCGCGTCGTCGACGGCGGCGGGGGCGG
CGGCGGCGGCGGTAGGGATCGAGGGCGGCGGGGGCGACCTCGGGAGCATC
GGCGGCAGCGGCGGCGGTAGCGGCGGAATACGACCGACCAGACCTTTGCC
AAGAAATCGAGCACGTGGTCTCGTTCCCCTGGCCGGAGGCCGAGGCACTC
GCTCGCGCGCGGCAGGAGACCGCCGAGGCGCTCCGCTCCGCGTCGTCGAC
GGCGGCGGGGGCGGCGGCGGCGGCGGTAGGGATCGAGGGCGGCGGGGGCG
ACCTCGGGAGCATCGGCGGCAGCGGCGGCGGTAG back to top
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