mRNA_E-siliculosus-1a_M_contig95.17471.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 462 bits (1190), Expect = 3.820e-159 Identity = 356/387 (91.99%), Postives = 365/387 (94.32%), Query Frame = 1 Query: 97 MLGNNRNIAERNKAAKETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257 MLG+NRNIAE+NKAAKETLKGEEERVLDLM DTRCP EMSEWLAAPLESAVARGDEGLA+KLVQAGAKIGGVALHEAVRRG++AIA LLLENGASVHD+EDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRL EFDMS LDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKAN ANAIDVLVGAGADIQAR MSGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A VG+RR SVQVV LLLRWGADETIV K GKTAADRIGTRR TEPGD ERARSLLTRAPADRAWRRRGLLVLCHA+PDRLQLGGDLAGLV RV GLEEVGVFRTIV+YL Sbjct: 1 MLGSNRNIAEKNKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 337 bits (863), Expect = 1.400e-109 Identity = 301/381 (79.00%), Postives = 318/381 (83.46%), Query Frame = 1 Query: 118 IAERNKAAKETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257 +AE NKAAKET+KGE +RVLDLMFDTR P EMSEWLAAPLESAV G EGLARKLVQAGAK+GGVALHE VRRG++A+A LLLENGASVHD+EDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEF++S LDFAA S VEI+RMLIDHGMEV+ A + G TAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A VG+R S QVVDLLLRWGADETIVSK G+TAAD IGTRR RT+P D ERARSLL RAPADRAWRRRGLLVLC AHPDRLQLGGDLAGLVA V GLEEVGVFRTIV+YL Sbjct: 11 LAENNKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 164 bits (416), Expect = 3.880e-43 Identity = 184/378 (48.68%), Postives = 228/378 (60.32%), Query Frame = 1 Query: 130 NKAAKETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTA-LHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTE-PGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGD-LAGLVARVFGLEEVGVFRTIV 1248 N+ A+ L+GEEER+ DL +T P++ + + LE A RG E L RKLV+AGA+IG A+H AVR G+ I LLE+GAS +++ TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + R + ++S LD A V+ +R LI+HG +V+ G A LH A N A+DVL+ AGA+ ++ + SG + AT ++ V+VVDLLLRWGADET V+ +G AAD IG + P + E R LL APADRAWRRR LVLC A PD++QL D +A L ARV GL E G+FRTIV Sbjct: 3 NECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIG-TAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIARLEARVLGLVEEGIFRTIV 379
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 4.320e-19 Identity = 193/405 (47.65%), Postives = 231/405 (57.04%), Query Frame = 1 Query: 172 VLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVHDEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTR-----RLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRL--------------------------------------QLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257 ++D +F+ Q+++E L A LE A A+G++ LA++LV+AGA+IG ALH AV G+ I LLE+ AS+ + D TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+R T+F AA VEILR +I+HG +V+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXX A R+ + +VV+ LLR GADETI + G A D IG RL TE D ER R LL APADRAWRRRG L++C A PDR+ GG+ A +V++V L+E G+FRTIV YL Sbjct: 1 MVDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGD-ALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRL--TE--DVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 2.400e-18 Identity = 187/368 (50.82%), Postives = 215/368 (58.42%), Query Frame = 1 Query: 142 KETLKGEEERVLDLMFDTRCPQEMSEWLAAPLESAVARGDEGLARKLVQAGAKIGGVALHEAVRRGYVAIAGLLLENGASVH--DEEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAA-AFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGD---GERA---RSLLTRAPADRAWRRRGLLVLCHAHPDRLQL----GGDLAGLVAR 1206 ++ L+G RVLDL+ P+E + WL PLE AV GD LA LV+ GA+ G A++EA+ G + LLL+NGASV D E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL S VN F ALH A N A+ VL+ AGADIQ + S S+ XXXXXXXXXXXXXXXXXXXXXXAA+ R+ S ++VDLLLR GADET ++G+ ADR+G E GD G LL APADRAWRRRGLLVLC A R +L GGD G ++R Sbjct: 6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAG-TAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVG----HCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSR 368
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.060e-17 Identity = 71/192 (36.98%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 589 RLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEP---GDGERARSLLTRAPADRAWRRRGLLVLCHA 1155 R+ S+LDFAA D +LR ++ HG++VN T+LH AA N AIDVLV AGA ++ + A GR+ + +VD+LLR GADET ++ G+TAA+ +G + P D ER R LL APADRAWRRRGLLVLC A Sbjct: 151 RIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTA-IVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 8.250e-16 Identity = 68/192 (35.42%), Postives = 89/192 (46.35%), Query Frame = 1 Query: 589 RLTEFDMSLLDFAASSQDVEILRMLIDHGMEVNLAAAFGTALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEP---GDGERARSLLTRAPADRAWRRRGLLVLCHA 1155 R+ S+LD AA D +LR ++ HG++VN T+LH AA N AIDVLV AGA ++ + A GR+ + +VD+LLR GADET ++ G+TAA+ +G + P D ER R LL AP DRAWRRRG LVLC A Sbjct: 102 RIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTA-IVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 6.810e-13 Identity = 74/198 (37.37%), Postives = 94/198 (47.47%), Query Frame = 1 Query: 670 HGMEVNLAAAFG-TALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDSVQVVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDG-----ERARSLLTRAPADRAWRRRGLLVLCHAH--PDRLQLG-----GDLAGLVARVFGLEE 1224 HG +VN G TAL A+ + A AIDVL AGA+I+A+ +GS+ AA G + ++VDLLLR GADET VS++G TAAD + + +TE D +R R LL RAPADRAWRRRG L+L AH R+Q G AG+ R EE Sbjct: 546 HGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQA-NGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSP-GTAEMVDLLLRRGADETAVSENGHTAADMV----VLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEE 737
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D8LP48_ECTSI (EsV-1-8 n=2 Tax=root TaxID=1 RepID=D8LP48_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.020e-12 Identity = 52/112 (46.43%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 958 VVDLLLRWGADETIVSKHGKTAADRIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAH------------PDRLQLGGDLAGLVARVFGLEEVGVFRTIVVYL 1257 VVDLLLRWGADET+ + GKT AD +G R+ +P ER R LL AP DRAWRRRG LV+ AH P + GG + L V L E VFR +V +L Sbjct: 362 VVDLLLRWGADETMKDERGKTPADYLG--RIRNLDPAVAERVRHLLVNAPKDRAWRRRGWLVMLRAHTLAAGEPVDIPEPKKRGGGGGVCPLKF-VLSLNEDAVFREVVAFL 470
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.690e-12 Identity = 67/207 (32.37%), Postives = 94/207 (45.41%), Query Frame = 1 Query: 601 FDMSLLDFAASSQDVEILRMLIDHGMEVNLAA--AFG-TALHWAAKANSANAIDVLVGAGADIQARTMSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVGRRRDS--VQVVDLLLRWGADETIVSKHGKTAAD---RIGTRRLFRTEPGDGERARSLLTRAPADRAWRRRGLLVLCHAHPDRLQLGGDLAGL 1197 F + ++ A V +++ ++HG++ + A A G TALH AA N A A++VL+ AGAD ++ GS + ++VVDLLLRWGA ET V+KHG T A+ R+ R TE G A LL RAPADRAWRRRG +V+ A + ++ GL Sbjct: 166 FPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAG--ALVLLARAPADRAWRRRGWVVMLRARSETERIAAQRRGL 370 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17471.1 >prot_E-siliculosus-1a_M_contig95.17471.1 ID=prot_E-siliculosus-1a_M_contig95.17471.1|Name=mRNA_E-siliculosus-1a_M_contig95.17471.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=420bp RWFTPNATVGTCRCCWVALPSRLNRKGAAPLNMLGNNRNIAERNKAAKETback to top mRNA from alignment at E-siliculosus-1a_M_contig95:49966..52478+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17471.1 ID=mRNA_E-siliculosus-1a_M_contig95.17471.1|Name=mRNA_E-siliculosus-1a_M_contig95.17471.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2513bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:49966..52478+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:49966..52478+ >mRNA_E-siliculosus-1a_M_contig95.17471.1 ID=mRNA_E-siliculosus-1a_M_contig95.17471.1|Name=mRNA_E-siliculosus-1a_M_contig95.17471.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2520bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:49966..52478+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |