Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Start | 1 |
Stop | 1 |
Cds size | 558 |
Model size | 1032 |
Exons | 1 |
Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622936508.7356272-UTR-E-siliculosus-1a_M_contig95:12922..13333 | 1622936508.7356272-UTR-E-siliculosus-1a_M_contig95:12922..13333 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 12923..13333 + |
1696251109.9852972-UTR-E-siliculosus-1a_M_contig95:12922..13333 | 1696251109.9852972-UTR-E-siliculosus-1a_M_contig95:12922..13333 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 12923..13333 + |
1622936508.7681513-UTR-E-siliculosus-1a_M_contig95:13891..13954 | 1622936508.7681513-UTR-E-siliculosus-1a_M_contig95:13891..13954 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 13892..13954 + |
1696251110.0057147-UTR-E-siliculosus-1a_M_contig95:13891..13954 | 1696251110.0057147-UTR-E-siliculosus-1a_M_contig95:13891..13954 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 13892..13954 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622936508.7500339-CDS-E-siliculosus-1a_M_contig95:13333..13891 | 1622936508.7500339-CDS-E-siliculosus-1a_M_contig95:13333..13891 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 13334..13891 + |
1696251109.9963062-CDS-E-siliculosus-1a_M_contig95:13333..13891 | 1696251109.9963062-CDS-E-siliculosus-1a_M_contig95:13333..13891 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 13334..13891 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17467.1 >prot_E-siliculosus-1a_M_contig95.17467.1 ID=prot_E-siliculosus-1a_M_contig95.17467.1|Name=mRNA_E-siliculosus-1a_M_contig95.17467.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=186bp
MMSYRGCCVEFVRVLSFSSDFSENGLGVFAASVWPLKCWKLLSGDCNRLF VKTIAIAKRLPQRGDANDAHQNSVARCNALSVEVDFRKMEQCGVWRVSGE DWDGGIEDRGREKERQMPGPQKVEKKEKGKKSRKAQKKETQGGKKNRKRG GEECSENDMKENYRGLRGGLTRRSTSSDEQRYPKE* back to topmRNA from alignment at E-siliculosus-1a_M_contig95:12923..13954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig95.17467.1 ID=mRNA_E-siliculosus-1a_M_contig95.17467.1|Name=mRNA_E-siliculosus-1a_M_contig95.17467.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1032bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:12923..13954+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) TTTTTTGCTGGTTCGAAGTTCCCGGCGTGACGGCATCAGGGTAGAGGCGG
ACTTGGTTCAAGCGGTGGAAATAGAAGGCCATAGATTAGACTAGAGGATG
CCTGTATTTGTTTTTGGGCTAATCCGACGGTCCCGGCGTGACGGCATCAG
GGTAGAGGCGGAGGGAAGAACGAGAGAGGCGAGAGCCCGAAAAGAAAAGA
AAAAGGAGAAAAGAAGGAAAAGAAACAAAAAGGGAAAAAGAAGAAAAAGA
CAAAAATATATGTACGTGATACTTGTTTCTATTTTTCATTTTAGTTGGTC
TCGCGTGTCGAGCGGGAGCGGTGGGCTCTGTGGATCGATCCCTCTTTCAA
TCACCTTTGTCCGGCGAGATGCTTGCTGCGAAGTCGGACTTGTTGGTGGC
GTTTGTCTGAGATGATGTCTTATCGCGGCTGCTGTGTTGAATTTGTCCGC
GTCCTTTCCTTCTCTTCCGATTTTTCGGAAAATGGACTTGGAGTTTTTGC
TGCGTCAGTTTGGCCATTGAAATGTTGGAAGTTGCTCAGCGGAGATTGTA
ACCGCCTATTCGTGAAGACAATAGCAATCGCGAAAAGACTGCCGCAACGA
GGTGACGCGAATGACGCGCACCAAAATAGTGTTGCTCGATGCAATGCCCT
CAGCGTTGAAGTGGATTTTCGGAAGATGGAACAATGTGGTGTATGGAGGG
TTTCAGGGGAGGATTGGGACGGAGGGATTGAGGATCGGGGCAGAGAGAAA
GAGAGGCAGATGCCAGGACCCCAAAAAGTGGAAAAGAAAGAAAAAGGGAA
AAAAAGTCGAAAAGCACAGAAAAAGGAAACACAAGGGGGAAAGAAGAACA
GAAAAAGGGGCGGAGAAGAATGTAGCGAAAATGACATGAAGGAAAACTAC
CGAGGGTTGCGTGGCGGGTTGACGAGACGAAGCACTAGCAGCGACGAGCA
GCGATACCCTAAGGAGTGAAATGAATGTCGAGACGGGTTGGGATTGTGAT
CTGCATGTCGAGTCTTGAGAGTTTCGGGGAAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:12923..13954+ >mRNA_E-siliculosus-1a_M_contig95.17467.1 ID=mRNA_E-siliculosus-1a_M_contig95.17467.1|Name=mRNA_E-siliculosus-1a_M_contig95.17467.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1116bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:12923..13954+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGATGTCTTATCGCGGCTGCTGTGTTGAATTTGTCCGCGTCCTTTCCTT CTCTTCCGATTTTTCGGAAAATGGACTTGGAGTTTTTGCTGCGTCAGTTT GGCCATTGAAATGTTGGAAGTTGCTCAGCGGAGATTGTAACCGCCTATTC GTGAAGACAATAGCAATCGCGAAAAGACTGCCGCAACGAGGTGACGCGAA TGACGCGCACCAAAATAGTGTTGCTCGATGCAATGCCCTCAGCGTTGAAG TGGATTTTCGGAAGATGGAACAATGTGGTGTATGGAGGGTTTCAGGGGAG GATTGGGACGGAGGGATTGAGGATCGGGGCAGAGAGAAAGAGAGGCAGAT GCCAGGACCCCAAAAAGTGGAAAAGAAAGAAAAAGGGAAAAAAAGTCGAA AAGCACAGAAAAAGGAAACACAAGGGGGAAAGAAGAACAGAAAAAGGGGC GGAGAAGAATGTAGCGAAAATGACATGAAGGAAAACTACCGAGGGTTGCG TGGCGGGTTGACGAGACGAAGCACTAGCAGCGACGAGCAGCGATACCCTA AGGAGTGAATGATGTCTTATCGCGGCTGCTGTGTTGAATTTGTCCGCGTC CTTTCCTTCTCTTCCGATTTTTCGGAAAATGGACTTGGAGTTTTTGCTGC GTCAGTTTGGCCATTGAAATGTTGGAAGTTGCTCAGCGGAGATTGTAACC GCCTATTCGTGAAGACAATAGCAATCGCGAAAAGACTGCCGCAACGAGGT GACGCGAATGACGCGCACCAAAATAGTGTTGCTCGATGCAATGCCCTCAG CGTTGAAGTGGATTTTCGGAAGATGGAACAATGTGGTGTATGGAGGGTTT CAGGGGAGGATTGGGACGGAGGGATTGAGGATCGGGGCAGAGAGAAAGAG AGGCAGATGCCAGGACCCCAAAAAGTGGAAAAGAAAGAAAAAGGGAAAAA AAGTCGAAAAGCACAGAAAAAGGAAACACAAGGGGGAAAGAAGAACAGAA AAAGGGGCGGAGAAGAATGTAGCGAAAATGACATGAAGGAAAACTACCGA GGGTTGCGTGGCGGGTTGACGAGACGAAGCACTAGCAGCGACGAGCAGCG ATACCCTAAGGAGTGA back to top
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