Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 348 |
| Model size | 364 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936508.666857-CDS-E-siliculosus-1a_M_contig95:5788..6136 | 1622936508.666857-CDS-E-siliculosus-1a_M_contig95:5788..6136 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 5789..6136 + |
| 1696251109.962972-CDS-E-siliculosus-1a_M_contig95:5788..6136 | 1696251109.962972-CDS-E-siliculosus-1a_M_contig95:5788..6136 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 5789..6136 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936508.687206-UTR-E-siliculosus-1a_M_contig95:6136..6150 | 1622936508.687206-UTR-E-siliculosus-1a_M_contig95:6136..6150 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 6137..6150 + |
| 1696251109.9742155-UTR-E-siliculosus-1a_M_contig95:6136..6150 | 1696251109.9742155-UTR-E-siliculosus-1a_M_contig95:6136..6150 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 6137..6150 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17466.1 >prot_E-siliculosus-1a_M_contig95.17466.1 ID=prot_E-siliculosus-1a_M_contig95.17466.1|Name=mRNA_E-siliculosus-1a_M_contig95.17466.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=116bp
STCVAAVAPDPRDRRRREATEAVTIPGWEAVGFGCSGAQDFRCRCRLRVS
MSEACRSSLITLGAGPLSCLRVMIRYCSRNACCRKVAENKPCVLDSHLPR
EDWGRRSQSGVHLSV* back to topmRNA from alignment at E-siliculosus-1a_M_contig95:5789..6150+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig95.17466.1 ID=mRNA_E-siliculosus-1a_M_contig95.17466.1|Name=mRNA_E-siliculosus-1a_M_contig95.17466.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=362bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:5789..6150+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TCAACGTGCGTAGCTGCCGTCGCGCCAGACCCCCGGGACCGTCGGCGGAG
GGAGGCAACGGAAGCGGTCACAATCCCCGGATGGGAAGCGGTCGGGTTTG
GTTGCTCCGGCGCTCAAGATTTTCGTTGTAGGTGTCGGCTCCGCGTAAGT
ATGTCTGAAGCATGCCGCTCTTCTCTCATTACCCTGGGTGCCGGGCCGTT
AAGCTGTTTGCGGGTCATGATTCGCTACTGCTCGAGAAATGCATGCTGCC
GAAAGGTAGCGGAGAACAAACCCTGCGTGCTCGATTCACACTTGCCACGA
GAGGATTGGGGACGGAGAAGCCAGTCTGGCGTTCACCTCTCTGTGTGACC
TGGATGAGGAAG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:5789..6150+ >mRNA_E-siliculosus-1a_M_contig95.17466.1 ID=mRNA_E-siliculosus-1a_M_contig95.17466.1|Name=mRNA_E-siliculosus-1a_M_contig95.17466.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=696bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:5789..6150+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TCAACGTGCGTAGCTGCCGTCGCGCCAGACCCCCGGGACCGTCGGCGGAG
GGAGGCAACGGAAGCGGTCACAATCCCCGGATGGGAAGCGGTCGGGTTTG
GTTGCTCCGGCGCTCAAGATTTTCGTTGTAGGTGTCGGCTCCGCGTAAGT
ATGTCTGAAGCATGCCGCTCTTCTCTCATTACCCTGGGTGCCGGGCCGTT
AAGCTGTTTGCGGGTCATGATTCGCTACTGCTCGAGAAATGCATGCTGCC
GAAAGGTAGCGGAGAACAAACCCTGCGTGCTCGATTCACACTTGCCACGA
GAGGATTGGGGACGGAGAAGCCAGTCTGGCGTTCACCTCTCTGTGTGATC
AACGTGCGTAGCTGCCGTCGCGCCAGACCCCCGGGACCGTCGGCGGAGGG
AGGCAACGGAAGCGGTCACAATCCCCGGATGGGAAGCGGTCGGGTTTGGT
TGCTCCGGCGCTCAAGATTTTCGTTGTAGGTGTCGGCTCCGCGTAAGTAT
GTCTGAAGCATGCCGCTCTTCTCTCATTACCCTGGGTGCCGGGCCGTTAA
GCTGTTTGCGGGTCATGATTCGCTACTGCTCGAGAAATGCATGCTGCCGA
AAGGTAGCGGAGAACAAACCCTGCGTGCTCGATTCACACTTGCCACGAGA
GGATTGGGGACGGAGAAGCCAGTCTGGCGTTCACCTCTCTGTGTGA back to top
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