mRNA_E-siliculosus-1a_M_contig943.17463.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A6H5JSG7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE) HSP 1 Score: 501 bits (1291), Expect = 2.030e-171 Identity = 240/248 (96.77%), Postives = 246/248 (99.19%), Query Frame = 2 Query: 731 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGACILGDSAFAESPWMRTPIGKPDGRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMREGESPADHGVDNAPTRNGTGRALSQGAGPFDSERAREVDYLRRNFLRREWGAAGSRMDQARLRDERRARRNNGTAR 1474 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFY+MVQEDQAQPV+SR+LFANGACILGDSAFAESPWMRTPIGKPD RAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTI+NACVILHNFIFM EGESPADHGVDNAPTRNGTGRALSQGAGPFDSERAREVDYLRRNFL+REWGAAGSRMDQARL+DERRARRNNGTAR Sbjct: 86 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYEMVQEDQAQPVSSRQLFANGACILGDSAFAESPWMRTPIGKPDNRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIVNACVILHNFIFMCEGESPADHGVDNAPTRNGTGRALSQGAGPFDSERAREVDYLRRNFLQREWGAAGSRMDQARLQDERRARRNNGTAR 333
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A6H5JA50_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE) HSP 1 Score: 196 bits (498), Expect = 2.230e-54 Identity = 90/135 (66.67%), Postives = 103/135 (76.30%), Query Frame = 2 Query: 731 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGACILGDSAFAESPWMRTPIGKPDGRAERFFNYKHSSMRFRVEHAFG 1135 R V+G IDGSHIKI AP + Q +YYNYK FYSI LLAIVDN G+FRW CSG G+C DSGVL T FY Q +Q++PV+ RR+FANGACILGDSAFAE PWMRTP P R +R+FN+ HSSMR RVEHA G Sbjct: 113 RKVVGGIDGSHIKIPAPTEHQQLAYYNYKKFYSIILLAIVDNRGLFRWTCSGCAGSCGDSGVLQHTKFYKAAQREQSKPVDERRIFANGACILGDSAFAEGPWMRTPYTMPSSREQRYFNFMHSSMRMRVEHALG 247
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A1X7UNG9_AMPQE (DDE Tnp4 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UNG9_AMPQE) HSP 1 Score: 120 bits (301), Expect = 3.900e-27 Identity = 69/169 (40.83%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 737 VIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGA--CILGDSAFAESPWMRTP-IGKPDGRAE-RFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHN 1231 IGAIDGSHI I+ P + YYN K FYSI + +VD+ G F G PG C D+ V +++ Y + P +R+L + ILGD+A+ W+ P I P + + +NY+ S R VE++FGRLK ++R LL LDCHLD+ P+I++AC+ LHN Sbjct: 19 AIGAIDGSHIPIIKPCHC-PSDYYNRKGFYSIIVQGLVDHTGKFLDAYIGWPGKCHDARVFQNSSLYKKGIKGSLLPCLTRKLGSVDVPLVILGDAAYPLLSWLMKPYIETPSSPDDIKLYNYRQSRARMVVENSFGRLKGRWRILLKRLDCHLDNVPSIVSACITLHN 186
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A3B4AJL1_9GOBI (DDE Tnp4 domain-containing protein n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AJL1_9GOBI) HSP 1 Score: 115 bits (288), Expect = 9.020e-25 Identity = 72/186 (38.71%), Postives = 99/186 (53.23%), Query Frame = 2 Query: 737 VIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRL--FANGACILGDSAFAESPWMRTP--IGKPDGRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMREGESPADHGVDN 1282 V GAIDG+HI I+AP + YYN KHFYS+ L A+VD+ F G PG D+ VL +++ Y + P RL ILGD+A+ PW+ P +G+ A+ FN++ S R VE AFGRLK ++R LL D H+ II+AC ILHN+ + E + VD+ Sbjct: 87 VAGAIDGTHIGIIAPAED-PADYYNRKHFYSVILQAVVDHRMQFWDINVGWPGKVHDARVLANSSLYRRGENGTLFPGWIERLNNVDVPVHILGDAAYPLLPWLLKPYPVGRGLTEAQTHFNFRLSQGRMTVERAFGRLKGRWRCLLKRCDVHISFVNQIISACCILHNYCEIANEEWEDEDIVDD 271
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A668AYU4_9TELE (DDE Tnp4 domain-containing protein n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668AYU4_9TELE) HSP 1 Score: 113 bits (283), Expect = 1.870e-24 Identity = 75/212 (35.38%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 740 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFAN--GACILGDSAFAESPWMRTPIGKPDGRA---ERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMREGE-SPADHGVDNAPTRNGTGRALSQGAGPFDSERARE 1357 +GAIDGSHI I+AP + +T YYN K +YSI L A+VD G+F G G+ D+ VL + + M+ + P +R L G ++GD A+ PW+ P +GR + FN K S R VE+AFGRLK ++R L+ DC ++ + C +L N + E PA G AL + GP +ER RE Sbjct: 36 VGAIDGSHIPIIAPQE-YRTDYYNQKGWYSIVLQAVVDGRGLFWDISVGKSGSVHDATVLRASLLWSMITSENLFPPVTRSLGGEDVGYFLVGDGAYPSQPWLVKPYAD-NGRLCHEQLVFNEKISRARVCVENAFGRLKGRWRCLMKRNDCSVETVKKMALTCCVLRNLCKLHNEEFQPAWVGAQLEEEMEQPAAALPERRGPAPAERVRE 245
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A3Q2PWM6_FUNHE (DDE Tnp4 domain-containing protein n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2PWM6_FUNHE) HSP 1 Score: 116 bits (290), Expect = 1.940e-24 Identity = 73/195 (37.44%), Postives = 106/195 (54.36%), Query Frame = 2 Query: 740 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGAC----ILGDSAFAESPWMRTPIGKPDG--RAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMREGESPADHGVDNA---PTRN 1297 IGA+DGSHI I+AP + + Y+N K +YSI++ A+VD+ MFR C G PG+ D+ VL ++ Y + + + +G ILGD A+ PW+ P + G A++ +N HS R VE+AFGRLK ++R LL +D + + P +I AC LHN I +GE D + A PT N Sbjct: 157 IGAVDGSHIPIVAPQEK-RVDYFNRKGWYSINMQALVDDRYMFRDLCIGWPGSTPDAHVLVNSQLYQFWENGVFPHIQTE---IDGVMVPPVILGDPAYPLLPWLMKPYPENAGTTEAQKKYNLIHSRNRMVVENAFGRLKGRWRRLLKRIDNKISNVPNVIAACCTLHN-ICETQGEDFLDQWANEANQPPTNN 346
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: A0A7M7NY25_STRPU (DDE Tnp4 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NY25_STRPU) HSP 1 Score: 114 bits (284), Expect = 2.100e-24 Identity = 69/193 (35.75%), Postives = 104/193 (53.89%), Query Frame = 2 Query: 737 VIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGACI----LGDSAFAESPWMRTPIGKPD-GRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMRE----------GESPADH 1270 +GA DG H+ I AP S ++Y+NYK ++SI +LA+VD++ F + G+ G+C+D+G+ D+ FY +++E A L + I +GD AFA WM P + + ER FNY+ S R VE++FG L +FR LL + + TI+ AC LHN + R+ GE+ ADH Sbjct: 59 TLGAFDGKHVAIRAPSHS-GSAYHNYKGYFSIVMLAVVDSQYNFMYLDVGSNGSCSDAGIFKDSEFYSVLEEGAAALPPPEPLPDDDHSIPYFFVGDDAFALKDWMMKPYATRNMTKPERLFNYRLSRARRIVENSFGILAHRFRCLLTTMLQKPGNVETIVLACCCLHNLLAARKPQKITRRADRGETDADH 250
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: UPI0015694C3C (protein ALP1-like n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI0015694C3C) HSP 1 Score: 116 bits (290), Expect = 2.640e-24 Identity = 75/223 (33.63%), Postives = 114/223 (51.12%), Query Frame = 2 Query: 740 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGA-------CILGDSAFAESPWMRTPIG-KPDGRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMREGESPADHGVDNAPTRNGTGRALSQGAGPFDSERA-REVDYLRRNF 1381 +GA+DG H++++ PP+S + YYNYKHF+S+ L+A+ D F W GA G +DSGV +T+ + + E+ R + N + I+ D AFA + + P G K + + FNY+ S R VE FG + K+R L +D +D I+ A +LHN + MR+G + D ++ AP N P +S RA EVD +R F Sbjct: 166 VGALDGKHVRLIQPPES-GSMYYNYKHFFSLVLMALCDANYCFIWIDVGAYGKDSDSGVFKETSLFKKLSENSLNLPEPRSITNNESDAFKLPYVIVADEAFAMTKNLMRPYGGKMLSKEKNIFNYRLSLARRYVECTFGIMCNKWRILHRPIDVKIDFAVDIVKAICVLHNLVRMRDGINQDDM-INPAPLPN---------VNPTNSGRAIHEVDNIRTKF 377
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: UPI0007B9D867 (putative nuclease HARBI1 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B9D867) HSP 1 Score: 114 bits (284), Expect = 3.450e-24 Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 740 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQE-----DQAQPVNSRRLFANGACILGDSAFAESPWMRTPIGKPDG----RAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHN 1231 +GAIDGSHI ILAP + T Y+N K +YSI L A+VD +G+F +G PG+ D+ VL +A +++ + Q + +N + + G ILGD+A+ + W+ P PD ++ +N+K S R VE+AFGRLK ++R LL DC+L+ +++ C +LHN Sbjct: 87 VGAIDGSHIPILAPQE-YHTEYFNRKRWYSIVLQAVVDAKGLFWNVFAGLPGSLHDARVLRLSALWELAERRHLFAQQYRNINGQDV---GFYILGDAAYPLTSWLMKPF--PDNGFLTAQQQVYNHKTSKARVVVENAFGRLKGRWRCLLKRNDCNLERVKSMVLTCCVLHN 253
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Match: UPI0018E25114 (putative nuclease HARBI1 n=1 Tax=Cyprinodon tularosa TaxID=77115 RepID=UPI0018E25114) HSP 1 Score: 117 bits (292), Expect = 3.860e-24 Identity = 74/188 (39.36%), Postives = 106/188 (56.38%), Query Frame = 2 Query: 740 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGAC----ILGDSAFAESPWMRTPIGKPDG--RAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIINACVILHNFIFMREGESPADHGVDNA 1285 IGAIDGSHI I+AP +S + Y+N K +YSI++ A+VD+ MFR C G PG+ D+ VL ++ Y + E+ P + +G ILGD A+ PW+ P + G A++ +N+ HS R VE+AFGRLK ++R LL +D + P +I AC LHN M +GE D + A Sbjct: 254 IGAIDGSHIPIVAPKES-RVDYFNRKGWYSINMQALVDDRYMFRDLCIGWPGSTHDARVLVNSRLYQ-IWENGVFPHLQTEI--DGVMVPPVILGDPAYPLLPWLMKPYPENAGTTEAQKKYNHIHSRNRMLVENAFGRLKGRWRRLLKRVDNKTSNVPNVIAACCTLHNICEM-QGEDFLDQWANEA 436 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig943.17463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig943.17463.1 >prot_E-siliculosus-1a_M_contig943.17463.1 ID=prot_E-siliculosus-1a_M_contig943.17463.1|Name=mRNA_E-siliculosus-1a_M_contig943.17463.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=205bp MFRWFCSGAPGACADSGVLTDTAFYDMVQEDQAQPVNSRRLFANGACILGback to top mRNA from alignment at E-siliculosus-1a_M_contig943:2103..4130+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig943.17463.1 ID=mRNA_E-siliculosus-1a_M_contig943.17463.1|Name=mRNA_E-siliculosus-1a_M_contig943.17463.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2028bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig943:2103..4130+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig943:2103..4130+ >mRNA_E-siliculosus-1a_M_contig943.17463.1 ID=mRNA_E-siliculosus-1a_M_contig943.17463.1|Name=mRNA_E-siliculosus-1a_M_contig943.17463.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1230bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig943:2103..4130+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |