Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 384 |
| Model size | 387 |
| Exons | 1 |
| Hectar predicted targeting category | signal peptide |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936489.5932715-CDS-E-siliculosus-1a_M_contig94:611212..611596 | 1622936489.5932715-CDS-E-siliculosus-1a_M_contig94:611212..611596 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 611213..611596 + |
| 1696251101.5353868-CDS-E-siliculosus-1a_M_contig94:611212..611596 | 1696251101.5353868-CDS-E-siliculosus-1a_M_contig94:611212..611596 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 611213..611596 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17459.1 >prot_E-siliculosus-1a_M_contig94.17459.1 ID=prot_E-siliculosus-1a_M_contig94.17459.1|Name=mRNA_E-siliculosus-1a_M_contig94.17459.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=128bp
LAVVFISVIILVYVCFVSQKPSRLLVVYDFFHRAGRRQPPHYQIVHTARQ
ARAVAGDITNATDRWDERMPETTNASNRSILLPHAFDLITINGCHRYHAT
RPHKDPLPNSRYPTYKYVPRKSASQPGF back to topmRNA from alignment at E-siliculosus-1a_M_contig94:611213..611598+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig94.17459.1 ID=mRNA_E-siliculosus-1a_M_contig94.17459.1|Name=mRNA_E-siliculosus-1a_M_contig94.17459.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=386bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:611213..611598+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TTGGCTGTGGTCTTCATCTCCGTTATTATTCTAGTGTATGTATGCTTCGT
TTCCCAAAAACCAAGTCGACTTCTTGTGGTTTACGATTTCTTTCACAGAG
CAGGGCGACGTCAGCCACCACACTACCAAATCGTCCATACCGCTCGGCAA
GCGCGCGCGGTGGCAGGAGACATCACCAACGCCACCGACCGCTGGGATGA
ACGAATGCCTGAAACAACGAACGCATCCAACCGTTCTATTCTACTCCCTC
ATGCGTTCGACCTCATAACTATCAACGGATGTCATCGATATCACGCCACT
CGACCACACAAAGACCCCCTGCCGAACTCTAGGTACCCGACCTACAAATA
TGTACCACGAAAGAGTGCAAGCCAGCCCGGTTTTCC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:611213..611598+ >mRNA_E-siliculosus-1a_M_contig94.17459.1 ID=mRNA_E-siliculosus-1a_M_contig94.17459.1|Name=mRNA_E-siliculosus-1a_M_contig94.17459.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=768bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:611213..611598+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TTGGCTGTGGTCTTCATCTCCGTTATTATTCTAGTGTATGTATGCTTCGT
TTCCCAAAAACCAAGTCGACTTCTTGTGGTTTACGATTTCTTTCACAGAG
CAGGGCGACGTCAGCCACCACACTACCAAATCGTCCATACCGCTCGGCAA
GCGCGCGCGGTGGCAGGAGACATCACCAACGCCACCGACCGCTGGGATGA
ACGAATGCCTGAAACAACGAACGCATCCAACCGTTCTATTCTACTCCCTC
ATGCGTTCGACCTCATAACTATCAACGGATGTCATCGATATCACGCCACT
CGACCACACAAAGACCCCCTGCCGAACTCTAGGTACCCGACCTACAAATA
TGTACCACGAAAGAGTGCAAGCCAGCCCGGTTTTTTGGCTGTGGTCTTCA
TCTCCGTTATTATTCTAGTGTATGTATGCTTCGTTTCCCAAAAACCAAGT
CGACTTCTTGTGGTTTACGATTTCTTTCACAGAGCAGGGCGACGTCAGCC
ACCACACTACCAAATCGTCCATACCGCTCGGCAAGCGCGCGCGGTGGCAG
GAGACATCACCAACGCCACCGACCGCTGGGATGAACGAATGCCTGAAACA
ACGAACGCATCCAACCGTTCTATTCTACTCCCTCATGCGTTCGACCTCAT
AACTATCAACGGATGTCATCGATATCACGCCACTCGACCACACAAAGACC
CCCTGCCGAACTCTAGGTACCCGACCTACAAATATGTACCACGAAAGAGT
GCAAGCCAGCCCGGTTTT back to top
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