mRNA_E-siliculosus-1a_M_contig94.17446.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: D8LN14_ECTSI (CAF1C_H4-bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN14_ECTSI) HSP 1 Score: 823 bits (2126), Expect = 6.400e-292 Identity = 502/550 (91.27%), Postives = 507/550 (92.18%), Query Frame = 2 Query: 62 MGKKTAGSKTATPRKVDISPASPTSQSTSKRQRSGEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFEDPFGDEFDPEDIDAINAEPEEDGDSDDGGMDAETGEAAASGSSTAATDAEGAAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAKGAPRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPATTV 1711 MGKKTAGSKTATPRKVDISPASPTSQSTSKRQRSGEDA XXXXXXXXXXXXXXX LVFEDPFGDEFDPEDIDA+NAEPEEDGD DDGGMDAETG+AAASGSSTAATDAEGAAAPQETKVWRAGVD+LAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGS+ XXXXXXXXXXXXXXXX PTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDV+VWDLEEQVSALAAKGAPRKSKVDPAFTFDGHME EGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASV TTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITS TDESMLAVSGADNQLTVWDLSVEADDEA XXXX GGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPATTV Sbjct: 1 MGKKTAGSKTATPRKVDISPASPTSQSTSKRQRSGEDAATSTAKKVAPHAXXXXXXXXXXXXXXX-LVFEDPFGDEFDPEDIDAMNAEPEEDGDDDDGGMDAETGDAAASGSSTAATDAEGAAAPQETKVWRAGVDDLAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSDXXXXXXXXXXXXXXXXXDPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVYVWDLEEQVSALAAKGAPRKSKVDPAFTFDGHME----EGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVXXXXXXXXXTTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSIEWHPTDESMLAVSGADNQLTVWDLSVEADDEAXXXXXXXXXXXXXGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPATTV 545
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A836CN53_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN53_9STRA) HSP 1 Score: 436 bits (1121), Expect = 5.120e-142 Identity = 273/440 (62.05%), Postives = 318/440 (72.27%), Query Frame = 2 Query: 413 DAEGAAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAKGAPRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGG-WVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSL-KAH-EEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSG--EPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDL--PPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPATTV 1711 D E A E + +R G+DE+ EG+E+EYD +AYHMYHSLRPEWPCLSFD IRD LG NR RYPH VFAVAGTQA R N++QVMKL+DLH+T +K D XXXXXXXX P LDHI+I H GG+NR+RSMPQ+PGVVA+WSE V++ D+ QV+AL KG PR + +TF GH + EGFA+DWS EGRL TG CG +HV EGG W TD +GH ASVE+LQWSPTE TVFASASAD +VA+WD R+ MLS+ +AH +DVNV XXXXXXXXXXXXXXXXXXXXXXXX+FG EPVAQF WHKAPITS DESMLAV+GADNQ+TVWDLSVEADD G G GG+ +L PPQLLF+HQGQ DIKELHFHPQ+PGVIM+TA DGFN++KPAT + Sbjct: 4 DVEQAEPQSEVRTFRPGLDEVPEGEEMEYDPSAYHMYHSLRPEWPCLSFDFIRDKLGTNRVRYPHIVFAVAGTQAARGQPNKIQVMKLADLHKT--QKLSADDEEXXXXXXXXXNDVE-----PMLDHIDIAHNGGINRIRSMPQQPGVVASWSEKGSVYLTDVTHQVNALD-KGGPRDTVATSLYTFKGHPD----EGFAMDWSRVAEGRLLTGCCGGHIHVHEPQEGGAWATDQQASLGHTASVEELQWSPTEHTVFASASADGSVAIWDTRRWAKPMLSIDQAHGSQDVNVMSXXXXXXXXXXXXXXXXXXXXXXXXSFGKATPEPVAQFSWHKAPITSIEWDPNDESMLAVAGADNQVTVWDLSVEADDGDLVG----GPNRDLGGIAELKLPPQLLFVHQGQHDIKELHFHPQVPGVIMTTALDGFNVWKPATVL 427
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A0P1AE81_PLAHL (Glutamate-rich wd repeat-containing protein 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE81_PLAHL) HSP 1 Score: 409 bits (1050), Expect = 1.220e-130 Identity = 236/420 (56.19%), Postives = 297/420 (70.71%), Query Frame = 2 Query: 446 KVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAK-GAPRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 KV+ GVD+L E + L+YDS+AY MY++L EWP LS DV+RDSLGA RSR+P T+F VAGTQA D+N++ VMK+S+L++T + D +D P L+ +IPH GGVNR+R MPQ P +VATWS+ VH+WD+ +Q+ +L K G P +K P ++F GH + EGFA+DWSP E GRL TGDC +++ + +GGW D VPFV H +SVEDLQWSPTE +VFAS S+D++V +WD+R+K G+ML + AH++ XXXXXXXXXXXXXXXXXXXXXXXXX F + PVA FR+H APITS TDES+LAVSGADNQ++VWD+SVE D EAA + G DLPPQLLFIHQGQTDIKELHFHPQ PGV+MSTA DG+N+FKPA Sbjct: 80 KVFMPGVDKLQEDEMLDYDSSAYDMYYALTAEWPALSIDVVRDSLGAVRSRFPMTIFMVAGTQASNPDDNQVTVMKMSELYKT-KNNDASDSEDDGKDDEDETDGD------PVLETRSIPHSGGVNRIRCMPQVPNIVATWSDRKKVHLWDISKQLESLDGKVGGPLPTKQMPVYSFTGHTD----EGFAMDWSPVEAGRLVTGDCSKFIYLWASSDGGWSIDKVPFVRHKSSVEDLQWSPTEASVFASCSSDRSVRIWDVRRKAGSMLDITAHDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFKADNPVAHFRYHTAPITSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVTVQGEKDNRKL----DLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGYNVFKPA 484
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A8J4WG55_9STRA (CAF1C_H4-bd domain-containing protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4WG55_9STRA) HSP 1 Score: 416 bits (1068), Expect = 5.800e-130 Identity = 270/482 (56.02%), Postives = 331/482 (68.67%), Query Frame = 2 Query: 260 LVFEDPFGDEFDPEDIDAINAEPEEDGDSDDGGMDAETGEAAASGSSTAATDAEGAAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAK-GAPRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 LVFEDPFGD+ + E++ E DGD + +D E + D E + KV+ GVD+L + + L+YDS+AY MY+++ EWP LS DV+RD+LGA RSR+P TVF VAGTQA AD N+L VMK+S+LH+T +NDXXXXXXXXXXXXX P L+ +IPH GG+NRVR MPQ +VATWS+ VH+WD+ +Q+ +L K GAP +K P +TF GH A EGFA+DWSP + GRL TGDC +++ EG W D VPF GH +SVEDLQWSPTET+VFAS S+D+TV +WD R+K G+ML + A XXXXXXXXXXXXXXXXXXXXXXXXX F + PVA FR+H AP+TS TDES+LAV+GADNQ++VWD+SVE D EAA +AG DLPPQLLFIHQGQTDIKELHFHPQ PGV+MSTA DGFN+FKPA Sbjct: 288 LVFEDPFGDDMEDEEM------IESDGDEE--VVDTEATD------KDVEMDGEEDSDKSVKKVFMPGVDKLQDDEVLDYDSSAYDMYYAMTAEWPSLSIDVVRDNLGAVRSRFPMTVFMVAGTQASNADENQLTVMKMSELHKTKH-------NNDXXXXXXXXXXXXXTEGDPVLESRSIPHPGGINRVRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPAKQSPVYTFSGH----ADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSEGAWNVDKVPFTGHKSSVEDLQWSPTETSVFASCSSDRTVRIWDTRRKAGSMLDVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFKADNPVAHFRYHTAPVTSIEWHPTDESVLAVAGADNQISVWDMSVEEDAEAAVPVAGENGEAKL----DLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 740
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A5D6XZ36_9STRA (CAF1C_H4-bd domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ36_9STRA) HSP 1 Score: 405 bits (1042), Expect = 7.350e-126 Identity = 245/423 (57.92%), Postives = 303/423 (71.63%), Query Frame = 2 Query: 437 QETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAK-GAPRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 Q +V+ GVD+L E + L+YDS+AY MY+++ EWP LSFD++RD+LGA R+R+P TV+ VAG+QA D N+L +MK+S+LH+T S D XXXXXXXXXX P L++ +IPH+GG+NRVR+MPQ +VATW++T VH+WD+ +Q+ +L K GAP +K P FTF GH A EGFA+DWSP + G+L TGDC ++ E W D VPF GH ASVEDLQWSPTE TVFAS SAD+TV +WD R+K G+ML + AHE+ XXXXXXXXXXXXXXXXXXXXXXXXX F + PVA FR+H APITS TDES+LAVSGADNQ++VWD+SVE D EAAA + DLPPQLLFIHQGQTDIKELHFH Q PGV++STA+DGFN+ PA Sbjct: 83 QAKRVYMPGVDKLGEDEVLDYDSSAYDMYYAMTAEWPSLSFDILRDNLGAVRTRFPMTVYVVAGSQAANTDENQLTIMKMSELHKTKH-------SEDSEXXXXXXXXXXAVDGDPVLENRSIPHKGGINRVRAMPQYSNIVATWADTKKVHLWDVAKQLESLDGKAGAPLPAKQAPLFTFHGH----ADEGFAMDWSPVQAGKLVTGDCSKFIYAWSNAESAWSVDKVPFTGHKASVEDLQWSPTEATVFASCSADRTVRIWDTRRKAGSMLDVVAHEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFKANSPVAHFRYHTAPITSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAAEVHDPENPKV-----DLPPQLLFIHQGQTDIKELHFHSQCPGVLVSTASDGFNVMAPA 489
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: W2Q8X3_PHYPN (CAF1C_H4-bd domain-containing protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=W2Q8X3_PHYPN) HSP 1 Score: 393 bits (1009), Expect = 1.510e-124 Identity = 260/482 (53.94%), Postives = 320/482 (66.39%), Query Frame = 2 Query: 260 LVFEDPFGDEFDPEDIDAINAEPEEDGDSDDGGMDAETGEAAASGSSTAATDAEGAAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAK-GAPRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 LVFEDPFGD D ED + I + DG + GEA+ S D + A Q KV+ GVD+L + + L+YDS+AY MY+++ EWP LS DV+ D+LGA RSR+P TVF VAGTQA AD+N++ VMK+S+LH+T + DGS+ XXXXXXXXX P L+ +IPH GGVNR+R MPQ +VATWS+ VH+WD+ +Q+ +L K GAP +K P +TF GH A EGFA+DWSP + GRL TGDC +++ EG W D VPF GH +SVE +VFAS S+D+TV +WD R+K G+ML + A XXXXXXXXXXXXXXXXXXXXXXXXX F + PVA FR+H AP+TS TDES+LAVSGADNQ++VWD+SVE D EAA + G DLPPQLLFIHQGQTDIKELHFHPQ PGV+MSTA DGFN+FKPA Sbjct: 30 LVFEDPFGD--DMEDEEMIES---------DGDEEIVDGEAS-SADKDVDMDGDEQAEKQVKKVFMPGVDKLQDDEVLDYDSSAYDMYYAMTAEWPALSIDVVPDNLGAVRSRFPMTVFMVAGTQATNADDNQITVMKMSELHKT----KHNDGSDSEXXXXXXXXXTEGD---PVLESRSIPHPGGVNRIRCMPQSSNIVATWSDRKKVHLWDIAKQLESLDGKAGAPLPAKQAPVYTFSGH----ADEGFAMDWSPVQAGRLVTGDCSKFIYLWANSEGAWSVDKVPFTGHKSSVEXXXXXXXXXSVFASCSSDRTVRIWDTRRKAGSMLDVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFKADNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAVPVQGENGEAKL----DLPPQLLFIHQGQTDIKELHFHPQCPGVLMSTAGDGFNVFKPA 484
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A484E1J0_BRELC (CAF1C_H4-bd domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1J0_BRELC) HSP 1 Score: 390 bits (1003), Expect = 1.100e-123 Identity = 253/482 (52.49%), Postives = 323/482 (67.01%), Query Frame = 2 Query: 260 LVFEDPFGDEFDPEDIDAINAEPEEDGDSDDGGMDAETGEAAASGSSTAATDAEGAAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAKG-APRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 L+FEDPFGD D ED + I++E G D AAA+ D + + + KV+ GVD+L + + L+YDS+AY MY+++ EWP LS DV+RD LG RSR+P TV+ VAGTQA ++D+N++ VMK+S+L++T + + S+ XXXXXXX P L+ +I H VNR+R MPQ +VATWS+ VH+WD+ +Q+ +L KG A +K P +TF GH A EGFA+DWS + GRL TGDC ++V EG + D VPF GH +SVEDLQWSPTE +VFAS S+D+TV +WD+R+K G+ML + AH+ XXXXXXXXXXXXXXXXXXXXXXXXXX F + PVA FR+H AP+TS TDES+LAVSGADNQ++VWD+SVE D EAA + DLPPQLLFIHQGQTDIKELHFHPQ PGV++STA DGFN+FKPA Sbjct: 30 LIFEDPFGD--DMEDEEMIDSE----------GDDEVVDGAAANTDHDIDMDGDETSGSKAKKVFMPGVDKLEDDEVLDYDSSAYDMYYAMTAEWPALSIDVVRDKLGMVRSRFPLTVYMVAGTQATQSDDNQITVMKMSELYKT----KHSEASDSXXXXXXXDTEGE-----PVLETRSISHPSAVNRIRCMPQSSNIVATWSDRKKVHIWDISKQLDSLDGKGGAILPAKQSPVYTFSGH----ADEGFAMDWSSVQTGRLVTGDCSKFIYVWSNSEGAFNVDKVPFTGHKSSVEDLQWSPTEASVFASCSSDQTVRIWDIRRKAGSMLDVAAHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFKADHPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAAKPVQSVDGETKL----DLPPQLLFIHQGQTDIKELHFHPQCPGVLISTAGDGFNVFKPA 482
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A024UF95_9STRA (CAF1C_H4-bd domain-containing protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UF95_9STRA) HSP 1 Score: 390 bits (1003), Expect = 1.330e-123 Identity = 254/491 (51.73%), Postives = 334/491 (68.02%), Query Frame = 2 Query: 260 LVFEDPFGDEFDPEDIDAINAEPEEDGDSD---------DGGMDAETGEAAASGSSTAATDAEGAAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAKG-APRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 LVFEDP+GD+ + E++ + DGD + + MD ++G D + A AP+ KVW V++L E + L+YD++AY +Y+++ EWP LS D+I+D+LGA R+++P T++ VAG+QA +A +N++ VMK+S+LH+T ++D XXXXXXXXXXXXX P L+ +I HRGGVNR+R+MPQ +VATW++T VH++D+ +Q+ +L K A ++ P FTF GH A EGFA+DWSP G L TGDC ++ G WV D VPF GH +SVED+QWSPTE TVFAS S+D+TV +WD+R K +MLS++AH++ XXXXXXXXXXXXXXXXXXXXXXXXX F S PVA FR+H AP+TS TDESMLAVSGADNQ+++WD+SVE D EAA D+PPQLLFIHQGQTDIKELHFHPQ PG+++STAADGFN+FKPA Sbjct: 32 LVFEDPYGDDLEDEEMVS-------DGDEEVVNNXXXXXENDMDVDSGNLP-----PLQNDDDEAEAPK--KVWLPNVEKLGEDEVLDYDASAYDLYYAMTAEWPALSLDIIKDNLGACRTKFPMTIYVVAGSQAPKAADNKITVMKMSELHKTKH-------NSDPDXXXXXXXXXXXXXGDPVLESRSIDHRGGVNRIRAMPQSSNIVATWADTKRVHIYDIAKQLQSLDGKNPAGLSAQAPPVFTFTGH----ADEGFAMDWSPVTAGSLLTGDCSKYIYHWVNNGGSWVVDKVPFTGHTSSVEDIQWSPTEATVFASCSSDRTVRIWDIRTKARSMLSVEAHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKFQSDSPVAHFRYHTAPVTSIEWHPTDESMLAVSGADNQISIWDMSVEEDAEAANATTAK---------LDVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFNVFKPA 488
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: M4BTG4_HYAAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTG4_HYAAE) HSP 1 Score: 385 bits (989), Expect = 1.390e-121 Identity = 259/484 (53.51%), Postives = 314/484 (64.88%), Query Frame = 2 Query: 260 LVFEDPFGDEFDPEDIDAINAEPEEDGDSDDGGMDAETGEAAASGSSTAATDAEG--AAAPQETKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAKG-APRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 LVFEDPFGD+ E EE +SDD GE AA D EG Q KV+ GVD+L + + L+YDS+AY MY+++ EWP LS DV+RD LG RSR+P T+F VAGTQA D N++ VMK+S+LH+T K D +D XXXXXXXX P L+ +IPH GGVNR+R MPQ +VATWS+ VH+WD+ +Q+ +L K A +K P +TF GH A EGFA+DWS E GRL TGD +++ E W D VPF GH +SVEDLQWS TE +VFAS S+D+TV +WD R+K G+ML + XXXXXXXXXXXXXXXXXXXXXXXXX F S PVA FR+H AP+TS TDES+LAVSGADNQ++VWD+SVE D EA + G DLPPQLLFIHQGQTDIKELHFHPQ PGV++STA+DGFN+FKPA Sbjct: 30 LVFEDPFGDD----------VEDEEMVESDDENEKVVDGERAADND----VDMEGDEQTDKQAKKVFMPGVDKLQDDEVLDYDSSAYDMYYAMTAEWPSLSIDVVRDDLGPVRSRFPMTMFMVAGTQATVTDENQITVMKMSELHKT---KHNDDLDSDGXXXXXXXXTEGD----PVLESRSIPHTGGVNRIRCMPQSSNIVATWSDRQKVHLWDISKQLESLNGKASAALPAKQAPVYTFSGH----ADEGFAMDWSLVETGRLVTGDSSKFIYLWANSESTWTVDKVPFTGHKSSVEDLQWSVTEASVFASCSSDRTVRIWDTRRKAGSMLDVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFKSDNPVAHFRYHTAPVTSIEWHPTDESVLAVSGADNQISVWDMSVEEDAEAVVPVDGENGEAKL----DLPPQLLFIHQGQTDIKELHFHPQCPGVLVSTASDGFNVFKPA 484
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Match: A0A6G0XVI8_9STRA (CAF1C_H4-bd domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XVI8_9STRA) HSP 1 Score: 382 bits (980), Expect = 3.310e-120 Identity = 229/421 (54.39%), Postives = 293/421 (69.60%), Query Frame = 2 Query: 443 TKVWRAGVDELAEGDELEYDSTAYHMYHSLRPEWPCLSFDVIRDSLGANRSRYPHTVFAVAGTQADRADNNRLQVMKLSDLHRTGRKKQRGDGSNDXXXXXXXXXXXXXXXXXPTLDHINIPHRGGVNRVRSMPQRPGVVATWSETSDVHVWDLEEQVSALAAKG-APRKSKVDPAFTFDGHMEASATEGFALDWSPTEEGRLATGDCGNSVHVTRTVEGGWVTDPVPFVGHVASVEDLQWSPTETTVFASASADKTVAVWDLRKKNGAMLSLKAHEEDVNVXXXXXXXXXXXXXXXXXXXXXXXXXXAFGSGEPVAQFRWHKAPITSXXXXXTDESMLAVSGADNQLTVWDLSVEADDEAAAGMAGAGXXXXAGGLKDLPPQLLFIHQGQTDIKELHFHPQIPGVIMSTAADGFNIFKPA 1702 TKVW V++L + L+YD++AY +Y+++ EWP LS D+++D+LGA R+++P T++ V G+QA +A +N++ VMK+S+LH+T ++ XXXXXXXXX P L+ I HRGGVNR+R MPQ +VATW++T VH++D+ +Q+ +L K A S+ P FTF GH A EGFA+DWSP G L TGDC ++ G W D VPF GH ASVED+QWSPTE +VFAS SADKTV +WD+R K +ML + AH++ XXXXXXXXXXXXXXXXXXXXXXXXX F + PVA FR+H AP+TS TDESMLAVSGADNQ+++WD+SVE D EAAA D+PPQLLFIHQGQTDIKELHFHPQ PG+++STAADGFN+FKPA Sbjct: 88 TKVWLPNVEKLGADEVLDYDASAYDLYYAMTAEWPALSLDIVKDNLGAVRTKFPMTIYVVTGSQAAKAADNKITVMKMSELHKTKH--------SEDSDXXXXXXXXXAEEGDPVLESRTIDHRGGVNRIRVMPQSSNIVATWADTKRVHIYDIAKQLQSLDGKNPAGMSSQAPPVFTFTGH----ADEGFAMDWSPVTAGSLLTGDCSKYIYHWVNNGGSWAVDKVPFTGHTASVEDIQWSPTEASVFASCSADKTVRIWDIRTKARSMLDVVAHDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKFQADSPVAHFRYHTAPVTSIEWHPTDESMLAVSGADNQISIWDMSVEEDTEAAAANTSK---------LDVPPQLLFIHQGQTDIKELHFHPQCPGLLVSTAADGFNVFKPA 487 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17446.1 >prot_E-siliculosus-1a_M_contig94.17446.1 ID=prot_E-siliculosus-1a_M_contig94.17446.1|Name=mRNA_E-siliculosus-1a_M_contig94.17446.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=551bp MGKKTAGSKTATPRKVDISPASPTSQSTSKRQRSGEDAATSTTKKVAPHAback to top mRNA from alignment at E-siliculosus-1a_M_contig94:516563..520933- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17446.1 ID=mRNA_E-siliculosus-1a_M_contig94.17446.1|Name=mRNA_E-siliculosus-1a_M_contig94.17446.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4371bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:516563..520933- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:516563..520933- >mRNA_E-siliculosus-1a_M_contig94.17446.1 ID=mRNA_E-siliculosus-1a_M_contig94.17446.1|Name=mRNA_E-siliculosus-1a_M_contig94.17446.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3306bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:516563..520933- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |