mRNA_E-siliculosus-1a_M_contig94.17437.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: D8LL28_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI) HSP 1 Score: 1162 bits (3006), Expect = 0.000e+0 Identity = 803/953 (84.26%), Postives = 811/953 (85.10%), Query Frame = 3 Query: 483 MRQEAQQRLAVQNPLLYRQQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRQTGAAGGATRGGVDVGAXXXXXXXXXXXXXXXXXXXXSEYDMSVRMRQHQQIILQRQXXXLAHQQQLHRQHQLAQVAQQNSYGRYGYPQHHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAELKRQDEEEGFDDAVDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEKSLPLVLESDMADMLMRYDSAAASTMVNRNEDRRVTPEEATRVWLNEVGLELPGKFTTDSARMKKIRQLTDVGRFLNRLLGLELARQTYLFQLFSDTLDSLVMKSRA 3341
MRQEAQQRLAVQNPLLYRQQ+AA XXXXXXXXXXXXXXXXXXXXXXXXXX RQTGAAGGATRGGVDVGAXXXXXXXXXXXXXXXXXXXX XXXX LKRQDEEEGFDDAVDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPD D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX VFIESFQQNKHAYGTIRDGDGVMFLTYSSL+AANRDGKSRLKQLLKWCGG+DFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLT VDGRGVGAMELVAMHLKQ GSFVCRTLSFSGC FELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSS EEEE+DPLGELDGMM+DSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEKSLPLVLESDMADMLMRYDSAAASTMVNR+EDRRVTPEEATRVWLNEVGLELPGKFTTDSARMKKIR+LTDVGRFLNRLLGLELARQTYLFQLFSDTLDSLVMKSR+
Sbjct: 1 MRQEAQQRLAVQNPLLYRQQIAAQXXXXXXXXXXXXXXXXXXXXXXXXXX----RQTGAAGGATRGGVDVGAXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------XXXXXXXLKRQDEEEGFDDAVDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQCKVPSSSSGRVRRGAAVAADAKLGNKNSEKXXXXXXXXXXXXXXXXXXXXXXXXX--VFIESFQQNKHAYGTIRDGDGVMFLTYSSLIAANRDGKSRLKQLLKWCGGQDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTPVDGRGVGAMELVAMHLKQRGSFVCRTLSFSGCPFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSEEEEEEDPLGELDGMMDDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEKSLPLVLESDMADMLMRYDSAAASTMVNRDEDRRVTPEEATRVWLNEVGLELPGKFTTDSARMKKIRKLTDVGRFLNRLLGLELARQTYLFQLFSDTLDSLVMKSRS 860
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE) HSP 1 Score: 998 bits (2580), Expect = 0.000e+0 Identity = 685/911 (75.19%), Postives = 696/911 (76.40%), Query Frame = 3 Query: 3021 KSLPLVLESDMADMLMRYDSAAASTMVNRNEDRRVTPEEATRVWLNEVGLELPGKFTTDSARMKKIRQLTDVGRFLNRLLGLELARQTYLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGDPE----VIHESTIAVVDPASKKESPADNDXXXEAKKRGKVVKAEMAAEGADGDKEGXXXXXXXXXXXEEKDSSRTLVVPTLRYNIQVDRGVPFSMGLSLKQQADTVASAETTRFEAKEADIKKASQKAGDAEAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX----RRKELSKVKSTLGRLQRRVDGFWYSKFPFAGASGFRKRVLLAMEKDVTLAGGLATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWNNMPDDDETGENGKEGGGSGXXXXXXXXXXXXXXXXXXXXXXDKAAGDGSSKEDEKPCCEVCGGSQDAGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------------------------------------------------------GRAPVFGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREKXXXXXXXXXXXXXXXXXXXXXXMKLEERNKQKVKARGGEAGASGDVKREEE----QEDGGAAVLPSLDGRGSFNGDLVQLLQG 5327
KSLPLVLESDMADMLMRYDSAAASTMVNR+EDRRVTPEEATRVWLNEVGLELPG+FTTDS RMKKIRQLTDVGRFLNRLLGL+LARQTYLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGDPE VIHESTIAVVDPASKKES ADND EAKKRGK VKAEMAAEGADGDK+G +EK SSRTLVVPTLRYNIQVDRGVPFSMGLSLKQQADTVAS ET RFEAKEA+IKKASQKAGDAEAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX RRKELSKVKSTLGRLQRRVDGFWYSKFPFAGASGFRKRVLLAMEKDVTLAG LATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEW+NMPDDD TG NG+EGG XXXXX DKA GD SSKEDEKPCCEVCGGSQD GDS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRAPVFGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEG+WSCPICRKR AH EREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRE XXXXXXXXXXXXXXXXXXXXX MKLEERNKQK K GG AGA GDVKREEE ++DGGA VL SLDGRGSFNGDLVQLLQG
Sbjct: 147 KSLPLVLESDMADMLMRYDSAAASTMVNRDEDRRVTPEEATRVWLNEVGLELPGRFTTDSVRMKKIRQLTDVGRFLNRLLGLQLARQTYLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGDPEDDDGVIHESTIAVVDPASKKESLADNDDD-EAKKRGKAVKAEMAAEGADGDKDGAGAKGKVKDK-KEKHSSRTLVVPTLRYNIQVDRGVPFSMGLSLKQQADTVASTETARFEAKEAEIKKASQKAGDAEAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKELSKVKSTLGRLQRRVDGFWYSKFPFAGASGFRKRVLLAMEKDVTLAGELATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWDNMPDDDGTGGNGQEGGXXXXXXXXKEGAGEKADSAGGEASGDKATGDSSSKEDEKPCCEVCGGSQDVGDSSGEEEEAAAEVVPAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGEXXXXXXEDEAASSGKKRERAVAXXXXXXXXXXXXXXERDDRGGDGDSDTESRESVMESRESGDEDEAGGMRARLRGCRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRVTRCRGGRAPVFGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGKWSCPICRKRTAHLEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREXXXXXXXXXXXXXXXXXXXXXXAMKLEERNKQKGKVGGGGAGARGDVKREEEAKEEEQDGGAPVLSSLDGRGSFNGDLVQLLQG 1055
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: A0A6H5KPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE5_9PHAE) HSP 1 Score: 716 bits (1848), Expect = 4.140e-237 Identity = 473/542 (87.27%), Postives = 477/542 (88.01%), Query Frame = 3 Query: 1398 MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEK 3023
MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX VFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKA+FLSTPGILEEDLDLSS EEEEDDPLGELDGM++DSDTES AARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDK STGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AETTSTDYISAP+QTLMRVIERCFPLPPRPRAMKMQDKEDFRAEK
Sbjct: 1 MLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDE-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRSGGDAGRQRKVPSSSGRVRRGAAVAADAKLGNKNSEEPXXXXXXXXXXXXXXXXXXXGGRGGVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKAAFLSTPGILEEDLDLSSEEEEEDDPLGELDGMIDDSDTESVAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDK-------STGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AETTSTDYISAPRQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEK 525
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI) HSP 1 Score: 564 bits (1453), Expect = 8.780e-177 Identity = 395/448 (88.17%), Postives = 398/448 (88.84%), Query Frame = 3 Query: 4005 AMEKDVTLAGGLATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWNNMPDDDETGENGKEGGGSGXXXXXXXXXXXXXXXXXXXXXX-DKAAGDGSSKEDEKPCCEVCGGSQDAGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAPVFGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREKXXXXXXXXXXXXXXXXXXXXXXMKLEERNKQKVKARGG--EAGASGDVKREEE----QEDGGAAVLPSLDGRGSFNGDLVQLLQG 5327
AMEKDVTLAGGLATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWN M DDD TGENGKEGG XXXXXX DKAAGD SSKEDEKPCCEVCGGSQD GDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAPVFGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRE+XXXXXXXXXXXXXXXXXXX MKLEERNKQK KA GG ASGDVKREEE ++DGGA VL SLDGRGSFNGDLVQLLQG
Sbjct: 321 AMEKDVTLAGGLATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWN-MHDDDGTGENGKEGGXXXXXXXXXKEGAGEKAGSDGGRASGDKAAGDSSSKEDEKPCCEVCGGSQDVGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRRGGW--RAPVFGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRERXXXXXXXXXXXXXXXXXXXQQAMKLEERNKQKGKAHGGGXXXXASGDVKREEEAGEEEQDGGAPVLSSLDGRGSFNGDLVQLLQG 765
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: A0A835ZH69_9STRA (P-loop containing NTP hydrolase pore-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH69_9STRA) HSP 1 Score: 457 bits (1177), Expect = 1.480e-141 Identity = 282/635 (44.41%), Postives = 338/635 (53.23%), Query Frame = 3 Query: 1089 VDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDG-SRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGK-----SRLKQLLKWCGGKDFDGCILLDECHRAKNLYA-AGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFEL-VTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLP 2969
+DDVS+ Y+P KL G PHPD VE+ +MAAV PP++WY L LEG +DV+ SGKLS LQLE++ YA Q HET LPDG SR GFF+GDGAGVGKGRQLA ++LEN L GR KH+WISVG DLA DARRDLDD+G G +I S+ K YG +R G GVMFLTYS+LVA G SRL+QL+ W GG FDGC+LLDECHRAKN Y+ AG G ++++G AVVELQA+LPNAR+VYCSATGASEPRNLGYMTRLGLWG G+PFP GF+ L VDG GVGAME++AMHLKQ+G+F+CRTLSF+GC FEL + D + Y+ AAA WQ L+RE+A + E+ L P P G + D + +A+R VWRYFWG+HQRFFRDLCIASKVPA I A+ ALD + VIGLQSTGEA T AA+ T D SAP TL RV+++C PLP
Sbjct: 24 IDDVSFCDYKPVKLAYGRPHPDATVESATMAAVMPPDIWYTPALLSLEGPADVIGSGKLSGLQLESVVYAAQRHETYLPDGVSRGGFFLGDGAGVGKGRQLAAMILENTLRGRNKHIWISVGADLALDARRDLDDIGAGP-----------------------------------------------------------------------------------------------RRRRLVGPPRTRGAYIPSYPLQKAPYGNLRFGHGVMFLTYSTLVAKRPGGARGRATSRLEQLIAWAGGAAFDGCLLLDECHRAKNFYSGAGNGPSSQSGRAVVELQARLPNARVVYCSATGASEPRNLGYMTRLGLWGQ-GTPFPSGFEQLLGTVDGHGVGAMEMMAMHLKQSGAFLCRTLSFAGCGFELPMCDDVTPGALAVYDRAAALWQRLRREVAASLDERGRLLRLPN-----------------PAGP---GLPDLIRRTESAQR---------VWRYFWGAHQRFFRDLCIASKVPAAIAIARAALDAGQACVIGLQSTGEAGTLAALAEA-----------------------------------QSETLPDTFSAPHHTLRRVVKKCLPLP 498
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: F0YNP5_AURAN (AAA_34 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP5_AURAN) HSP 1 Score: 401 bits (1030), Expect = 4.210e-121 Identity = 246/576 (42.71%), Postives = 310/576 (53.82%), Query Frame = 3 Query: 1071 EGFDDAVDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDGKS--RLKQLLKWCGGKDFDGCILLDECHRAKNLYA-AGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTP-GILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRG 2786
EG +DA DDV ++ Y+P KL G+ HPDPVVEN S++AV PP+L ++ L L+ + ++ GKLSALQLE++AYA Q + RL G+R GFFIGDGAG+GKGRQLAGI+ +++ G +H+W+SV NDL FDA RDL DLGC I NK YGT+++ GV+F TYS+L+AA + K RL Q+L WCG F GC+L DE H+AKNL+ +GGG TK G AV+ELQ LP+AR+VYCSATGASEPR+LGYM RLGLWG PF F+ FLT VD RGVG MELVAMHLKQ G+ VCR LSF C FEL+ ++ +E+ Y+ AA W LKR + +A L+ P + EEDL E ARR H G +WRYFWG+HQRFF+DLC+ASKVPA I+ A+ AL + KCVVIGLQSTGEA T+ A++ G
Sbjct: 38 EGGEDATDDVQFSDYQPLKLRGGLAHPDPVVENASLSAVRPPDLGGDV-LANLD--ASIIAQGKLSALQLESVAYARQRFDMRLESGARCGFFIGDGAGMGKGRQLAGIIAQHWNEGVERHLWVSVSNDLKFDAERDLRDLGC--------------------------------------------------------------------------------------------------------------AHIPVIPLNKCDYGTLKEKKGVIFCTYSALIAARKGKKPQRRLDQILAWCGRASFGGCLLFDESHKAKNLFGGSGGGKPTKVGQAVMELQTSLPDARVVYCSATGASEPRHLGYMDRLGLWGGDACPFAS-FRSFLTEVDKRGVGMMELVAMHLKQRGALVCRALSFKNCTFELMDGIMNVHVEKVYDRAAELWDVLKRVMEEML--RAGELADPFAVSEEDL------------------------AEGKKARRGH-----GMLWRYFWGAHQRFFKDLCVASKVPAVIDVAKSALADGKCVVIGLQSTGEARTKDAIEEYG 468
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: A0A7S3JZA5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZA5_9STRA) HSP 1 Score: 404 bits (1039), Expect = 1.020e-112 Identity = 272/743 (36.61%), Postives = 365/743 (49.13%), Query Frame = 3 Query: 1041 EAELKRQDEEEGFDDAVDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEG-ESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDGDGVMFLTYSSLVAANRDG--KSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAA-TKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAI-GSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEKSLPLVLESDMADMLMRYD-SAAASTMVNRN-EDRRVTPEEATRVWLNEVGLELPGKFTTDSARMKKIRQLTDVGRFL 3248
E+++ +DEEE +DA+D+V + Y P+KL GI HPDPVVEN S++AV PP+L + L G S ++K+G LS+LQLE+IAYA RLPDG R GFFIGDGAG+GKGRQLAGI+ + G KHVWISV NDL FDA RDL+D+G G+ + NK Y +R GV+F TY+SL++A+++ + R+ QL+ WCGG+ F GCI+ DE H+AKNL+A+G GA TK G AV+E+Q LPNARIVYCSATGASEPR+ GYM RLGLWG+ G+PFP F+ FL V+ RGVG MELVAMHLKQ G+ VCR LSF C FEL+ V+ +E Y+ AA W +L+ L K E DP + D +D D ++ G WRYFWG+HQRFF+DLC+ASKVP IE +QAL DKC VIGLQSTGEA T A++ G + D++SAP+ TL R+I++ F +P + + +D ++ + ++ R AA +++ N D+ + + ++V LE P + R K IR++T G+ L
Sbjct: 69 ESKITLKDEEEADEDALDEVEFADYVPQKLKFGIAHPDPVVENASLSAVSPPDLGDDC----LNGIPSKIIKNGNLSSLQLESIAYANLRFSKRLPDGKRYGFFIGDGAGMGKGRQLAGIIAQQIGQGNLKHVWISVSNDLRFDAERDLNDVGAGQ--------------------------------------------------------------------------------------------------------------VTVLPMNKQDYKPLRLDRGVIFSTYASLISASKEKVKRKRIDQLVTWCGGEKFQGCIMFDESHKAKNLFASGSGAKPTKVGQAVLEIQRLLPNARIVYCSATGASEPRHFGYMERLGLWGSHPGAPFPN-FEVFLDEVESRGVGMMELVAMHLKQQGALVCRALSFKNCTFELIDGVMDAHVERVYDRAAEIWDQLRLVLLELFRRK---------------------ELKDPFDKPDD--DDEDEYGLVTKKTQNKTNHGIFWRYFWGAHQRFFKDLCVASKVPKVIECVEQALKEDKCCVIGLQSTGEARTADAVEEYG------------------------------------SVMDDFVSAPRATLERLIKKTFVVP------DLNNSDDEVSDNDADVAMDQAPLGRTRRSRRKAAPEALLSTNIRDKEIDIDSENDDLDDDVRLEGPAADGIELHRTK-IRKMTSNGKLL 630
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: A0A2P2LR61_RHIMU (AAA_34 domain-containing protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LR61_RHIMU) HSP 1 Score: 375 bits (962), Expect = 3.430e-111 Identity = 238/631 (37.72%), Postives = 315/631 (49.92%), Query Frame = 3 Query: 1101 SYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDG-----DGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRP 2978
++T YRP KL IG PHPDP+VE +S++AV PPE Y LK+++ + K+ LS LQ+E + YACQ + LP+GSRAGFF+GDGAGVGKGR +AG++ EN+LH R+K +WISVG+DL FDARRDLDD+G +I+ NK Y + +GV+FLTYSSL+A++ G+SRL+QL+ WCG FDG ++ DECH+AKNL G T+ G AV+E+QA+LP+A ++YCSATGASEPRN+GYM RLGLWGA G+ F F+ FL A+D GVGA+ELVAM +K G +VCRTLS+ G FE+V L +M E Y +AA FW EL+ EL L+ L D +SS +WR +W SHQRFFR +C+++KVPAT+ A+QAL DKCVVIGLQSTGEA TE A+ G + D+IS P++ L++ +E +PLP +P
Sbjct: 95 TFTDYRPAKLSIGPPHPDPIVETSSLSAVQPPEPTYELKIKD-----KLEKTKALSCLQIETLVYACQRNLQHLPNGSRAGFFVGDGAGVGKGRTIAGLIWENWLHERKKALWISVGSDLKFDARRDLDDVGA--------------------------------------------------------------------------------------------------------------PYIDVHALNKLPYSKLDSKSVGVREGVVFLTYSSLIASSEKGRSRLQQLVNWCGS-GFDGLVIFDECHKAKNLVPESGSQPTRTGEAVLEIQARLPDACVIYCSATGASEPRNMGYMVRLGLWGA-GTCFTD-FQKFLGALDKGGVGALELVAMDMKARGMYVCRTLSYRGVEFEVVEAPLEAQMTEMYKKAAEFWAELRVEL----------LTASSFLPHDKPISSQ------------------------------------LWRLYWSSHQRFFRHMCMSAKVPATVRLAKQALMEDKCVVIGLQSTGEARTEEAVTKYG------------------------------------SELDDFISGPRELLLKFVEENYPLPEKP 525
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: A0A835VDC6_VANPL (PHD-type domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VDC6_VANPL) HSP 1 Score: 384 bits (985), Expect = 9.160e-111 Identity = 248/627 (39.55%), Postives = 313/627 (49.92%), Query Frame = 3 Query: 1113 YRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDG-----DGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRP 2978
YRP KL +G PHPDPVVE +S++AV PPE Y L + E D+ K+ LS LQ+E + YACQ H L +G+RAGFFIGDGAGVGKGR +AG++ EN+ HGR K +W+SV +DL FDARRDLDD+G IE NK Y + DGV+FLTY+SL+A++ G+SRL+QLL+WCG DFDG I+ DECH+AKNL GG AT+ G AV+E+QA+LP +R+VYCSATGASEPRN+GYMTRLGLWGA G+ F F DFL A+D GVGA+ELVAM +K G +VCRTLS+ G FE++ L EEM + Y +AA FW EL+ EL LS L E+ SS VWR +W SHQRFFR +C+A+KVPA + A+QAL +KCVVIGLQSTGEA TE A+ G D++S PQ+ L+++IE +PLPP+P
Sbjct: 157 YRPPKLSLGDPHPDPVVETSSLSAVQPPEPTYVLVIM---NELDISKA--LSCLQIETLVYACQRHLQHLQNGARAGFFIGDGAGVGKGRTIAGLIWENWQHGRIKSLWVSVSSDLKFDARRDLDDVGA--------------------------------------------------------------------------------------------------------------TCIEVHALNKLPYSKLDSKAVGIKDGVIFLTYNSLIASSEKGRSRLQQLLQWCGS-DFDGLIVFDECHKAKNLIPEAGGQATRTGEAVLEIQARLPESRVVYCSATGASEPRNMGYMTRLGLWGA-GTCFQR-FHDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGVEFEVIEAPLEEEMMDMYKKAAEFWAELRVEL----------LSASAFLPEEKPNSSQ------------------------------------VWRLYWASHQRFFRHMCMAAKVPAAVRLAKQALAENKCVVIGLQSTGEARTEEAVTKYG------------------------------------LELDDFVSGPQELLLKLIEENYPLPPKP 583
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Match: UPI00053F6BCD (protein strawberry notch homolog 1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F6BCD) HSP 1 Score: 393 bits (1009), Expect = 3.700e-110 Identity = 249/649 (38.37%), Postives = 319/649 (49.15%), Query Frame = 3 Query: 1101 SYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFIESFQQNKHAYGTIRDG-----DGVMFLTYSSLVAANRDGKSRLKQLLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSAEEEEDDPLGELDGMMEDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKEDFRAEKSLP 3032
++T YRP KL IG PHPDP+VE +S++AV PPE Y+L ++E ++V+S LS LQLE + YA Q H LP+G RAGFF+GDGAGVGKGR +AG++ EN+ H RRK +WISVG+DL FDARRDLDD+G +E NK YG + +GV+F TYSSL+A++ GKSRL QL++WCGG+DFDG ++ DECH+AKNL GG T+ G AV+ELQ KLP AR+VYCSATGASEPRN+GYM RLGLWG G+ F FKDFL A++ GVGA+ELVAM +K G FVCRTLS+ G FE+V L +M ETY +AA FW EL+ EL A SA E+ P +WR +W SHQRFFR LC+++KVP ++ A+QAL KCVV+GLQSTGEA TE A+ G D++S P++ L++ +E +PLP +P + D EK LP
Sbjct: 180 TFTDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLAIKE-----EIVQSKMLSCLQLETLVYASQRHMQHLPNGERAGFFVGDGAGVGKGRTIAGLIWENWQHRRRKALWISVGSDLKFDARRDLDDVGA--------------------------------------------------------------------------------------------------------------TSVEVHALNKLPYGKLDSKSVGIREGVLFSTYSSLIASSEKGKSRLSQLVQWCGGRDFDGLVIFDECHKAKNLVPEAGGQPTRTGEAVLELQDKLPEARVVYCSATGASEPRNMGYMVRLGLWGD-GTSFLN-FKDFLGALEKGGVGALELVAMDMKARGMFVCRTLSYKGAEFEVVEAPLDPKMTETYKKAAGFWAELRVELLTA---------------------SAFHNEEKPTSSQ-------------------------LWRLYWASHQRFFRHLCMSAKVPTVVKLAKQALGESKCVVVGLQSTGEARTEEAVTKYG------------------------------------LELDDFVSGPRELLLKFVEENYPLPEKPEPIP-----DDEGEKELP 624 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17437.1 >prot_E-siliculosus-1a_M_contig94.17437.1 ID=prot_E-siliculosus-1a_M_contig94.17437.1|Name=mRNA_E-siliculosus-1a_M_contig94.17437.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1720bp MSNLLVPPELKSLHEGYLAEGVPGWGSAFQYRSVCSTDPGRILNFLRSRAback to top mRNA from alignment at E-siliculosus-1a_M_contig94:434721..464805+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17437.1 ID=mRNA_E-siliculosus-1a_M_contig94.17437.1|Name=mRNA_E-siliculosus-1a_M_contig94.17437.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=30085bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:434721..464805+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:434721..464805+ >mRNA_E-siliculosus-1a_M_contig94.17437.1 ID=mRNA_E-siliculosus-1a_M_contig94.17437.1|Name=mRNA_E-siliculosus-1a_M_contig94.17437.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=10320bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:434721..464805+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |