Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Match:
D8LL26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL26_ECTSI)
HSP 1 Score: 724 bits (1868), Expect = 3.090e-257
Identity = 367/374 (98.13%), Postives = 369/374 (98.66%), Query Frame = 2
Query: 743 DLNEVGGLQLESPPDATGIAFPAGTYEFGAEDFRFDLGREDVDLFPAPDIYERGSYRARKPLKLPELGNALTACKGWWAEEFTFRGFGIGFVKPVFRGLLLRPDLGVGVRLPVTLHFRSWESREALPSVALSLFVLWPPAVQVSQAMSYPAELLQELATTAARKIVVPSKEAIQVRRRKEAVQRLGVSIGVRYSSTYGFQWWLSPYFFLLPGVRVLWTLYQSMMTLLLSSLALMQRSDASGLDRENGRAENQEALWVVALRSWAAEKTSGLGYALYLSGNRLGGAAYVNFMPFFLPTLRAATSRDSSGVKEPGAEQHEQGVDDVAAPVQEDAGTREAVASDVVVGVTPDGCGAESNATEAEQQREGAVLQPISA 1864
DLNEVGGLQLESPPD TGIAFPAGTYEFGAEDFRFDLGREDVDLFPAPDIYERGSYRARKPLKLPELGNALTACKGWWAEEFTFRGFGIGFVKPVFRGLLLRPDLGVGVRLPVTLHFRSWESREALPSVALSLFVLWPPAVQVSQAMSYPAELLQELATTAARKIVVPSKEAIQVRRRKEAVQRLGVSIGVRYSSTYGFQWWLSPYFFLLPGVRVLWTLYQSMMTLLLSSLALMQRSDASGLDRENGRAENQEALWVVALRSWAAEKTSGLGYALYLSGNRLGGAAYVNFMPFFLPT RAATSRDSSGVK+PGAEQ EQGVDDVAAPVQEDAGTREAV S+V VGVTPDGCGAESNATEAEQQREGAVLQPISA
Sbjct: 6 DLNEVGGLQLESPPDTTGIAFPAGTYEFGAEDFRFDLGREDVDLFPAPDIYERGSYRARKPLKLPELGNALTACKGWWAEEFTFRGFGIGFVKPVFRGLLLRPDLGVGVRLPVTLHFRSWESREALPSVALSLFVLWPPAVQVSQAMSYPAELLQELATTAARKIVVPSKEAIQVRRRKEAVQRLGVSIGVRYSSTYGFQWWLSPYFFLLPGVRVLWTLYQSMMTLLLSSLALMQRSDASGLDRENGRAENQEALWVVALRSWAAEKTSGLGYALYLSGNRLGGAAYVNFMPFFLPTFRAATSRDSSGVKDPGAEQREQGVDDVAAPVQEDAGTREAVPSEVFVGVTPDGCGAESNATEAEQQREGAVLQPISA 379
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Match:
A0A6H5KR13_9PHAE (Peroxin/Ferlin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KR13_9PHAE)
HSP 1 Score: 323 bits (827), Expect = 4.580e-103
Identity = 171/189 (90.48%), Postives = 171/189 (90.48%), Query Frame = 2
Query: 86 MTACKALLFRSALVAILVHAVGGNEFRTALSNDGYTAA-AXXXXGRTPAFEEEEAAPVTLASSRAVAADRRSRFEAEADVNTGPDPFFADLEFDVARQGGKEIREPP-KKLLLHKVEVYEVESGGLGRRWRQSRTGWTYKDGSSALPPRQVLCPDEWTWASEWKIDGSGGRDEAGWEYSKSLMKFNSFR 646
MTACKALLFRSALVAILVHAVGGNEFRTAL NDGYTAA AXXXX APV LASSRAVAADRRSRFEAEADV TGPDPFFADLEFDVARQ KEIREPP KKLLLHKVEVYEVESGGLGRRWRQSRTGWTYKDGSSALPPRQVLCPDEWTWASEWKIDGSGGRDEAGWEYSKSLMKFNSFR
Sbjct: 1 MTACKALLFRSALVAILVHAVGGNEFRTALRNDGYTAASAXXXXXXXXXXXXXXXAPVMLASSRAVAADRRSRFEAEADVKTGPDPFFADLEFDVARQDDKEIREPPPKKLLLHKVEVYEVESGGLGRRWRQSRTGWTYKDGSSALPPRQVLCPDEWTWASEWKIDGSGGRDEAGWEYSKSLMKFNSFR 189
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Match:
A0A835Z8S6_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S6_9STRA)
HSP 1 Score: 156 bits (394), Expect = 1.210e-36
Identity = 147/487 (30.18%), Postives = 204/487 (41.89%), Query Frame = 2
Query: 359 FDVARQGGKEIREPPKKL------------LLHKVEVYEVESGGL-GRRWRQSRTG-WTYKDGSSALPPRQVLCPDEWTWASEWKID--GSGGRDEAGW---EYSKSLMKFNSFRVPRGRRLADRF-RRRRWVRAMQCVRPQREQQQEDLNEVGGLQLESPP-------------------------DATGIAFPAGTYE----FGAEDFRFDLGREDVDLFPAP-----------------DIYERGSYRARKPLKLPELGNALTACKGWWAEEFTFRGFGIGFVKPVFRGLLLR---PDLGVGVRLPVTLHFRSWESREALPSVALSLFVLWPPAVQVSQAMSYPAELLQELA--------------TTAAR---KIVVP--------SKEAIQVRRRKEAVQRLGVSIGVRYSSTYGFQWWLSPYFFLLPGVRVLWTLYQSMMTLLLSSLALMQRSDASGLDRENGRAENQEALWVVALRSWAA 1537
FD A Q + PPK ++ VEVYE + G G Q W+Y DG+ A PP +V PD W W +W +D + DEAGW + S +K + +G + + RRRRWVR M+ R D + G L+ P ATG A AG AE+ R + P + R R + LG+AL WW EF FRGFG+G VKP+F G +LR D+GVG+R+P+T HF WE+R LP ++ SLF WP VQ S MS + LQ+ A T R KI + +K+ +Q R+ V R+GV++ VR S+ YG Q W SPY FLLPGVR++ S + L+L + R A+ ++ + + A A+ WA+
Sbjct: 55 FDDAPQPDFAVYRPPKPTAQEEKERAAADAVVADVEVYENQVWGADGEEGGQHVLHRWSYSDGTPATPPSEVQLPDMWLWEGDWSVDCDHTPTCDEAGWHDLDDDSSTVK----ELTKGENIKSVYTRRRRWVRTMRL----RSGASTDSSLRGIKALKEHPRGRAAAAATALHHAAAANTSTDTTVQATGDAARAGVARPVQPADAEEGRRKRRASGIATVAVPANVTXXXXXXXXXXXGDXXXXXXAERKRLARRQRPLGSALAQ---WWEREFVFRGFGVGLVKPLFAGYMLRGNLSDMGVGLRMPITSHFNCWEARRDLPLISSSLFFFWPLKVQTSFTMSVASAQLQDWAGGVKGLWLALADSFTAEGRRRAKIWLSGSGEGGAFAKKPVQ---RRTTVTRVGVTVSVRLSAEYGLQVWASPYIFLLPGVRIITDALSSALALILGT-----RDTAAAVEARRAQEAARLASATYAVALWAS 522
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Match:
A0A6P8R6E9_GEOSA (fer-1-like protein 5 isoform X6 n=8 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8R6E9_GEOSA)
HSP 1 Score: 62.4 bits (150), Expect = 3.570e-6
Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 2
Query: 395 EPPKKLLLHK--------VEVYEVESGGLGRRWRQSRTGWTYKDGSSALPPRQVLCPDEWTWASEWKIDGSGGRDEAGWEYSKSLMKFNSFRVPRGRRLADR----FRRRRWVR 700
EP K+LLL +VYE E G W + T +DG++ ++LCP +W + +WK++ + D+AGWEYS L K + + + A++ RRRRWVR
Sbjct: 904 EPQKRLLLDGDTNYSEILEQVYENEIREPGEEWVPAEVPNTTEDGTACYEKEEILCPPDWFYRDDWKVELNRAVDDAGWEYSVGLDKSS---ISKSWHSAEKTYHTHRRRRWVR 1014
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Match:
UPI00112BEB79 (fer-1-like protein 5 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112BEB79)
HSP 1 Score: 60.8 bits (146), Expect = 1.080e-5
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 2
Query: 371 RQGGKEIREPPKKLLL-----HKV---EVYEVESGGLGRRWRQSRTGWTYKDGSSALPPRQVLCPDEWTWASEWKIDGSGGRDEAGWEYSKSLMKFNSFRVPRGRRLADR----FRRRRW 694
R G + EP K+LLL H +VYE E G W + T DG++ +LCP +W + +WK++ + DEAGWEY + F+ PR +++ +RRRRW
Sbjct: 864 RWDGDWVVEPQKRLLLDGDTNHSEVLEQVYENEIREPGEEWGPAPVPHTNADGTACPQKEAILCPPDWYYRDDWKVEVNRAVDEAGWEYG---VGFDPSTAPRSWHTSEKTYHTYRRRRW 980
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Match:
A0A6G0XJ19_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ19_9STRA)
HSP 1 Score: 57.8 bits (138), Expect = 7.230e-5
Identity = 30/85 (35.29%), Postives = 44/85 (51.76%), Query Frame = 2
Query: 467 WRQSRTGWTYKDGSSALPPRQVLCPDEWTWASEWKIDGS-GGRDEAGWEYSKSLMKFNSFRVPRG----RRLADRFRRRRWVRAM 706
W R ++ + G + V+CP WTW SEWK+D DE GW Y+ +F + + +G R++ + RRRRWVR M
Sbjct: 633 WPTDRPRFSNRQGDKEMNFNDVVCPPNWTWTSEWKVDMKYTDCDEEGWSYATDFPRFK-YHLAKGKSNPRKVGNSVRRRRWVRTM 716
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17436.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 6
0 1 Expect = 3.09e-257 / Id = 98.13 Expect = 4.58e-103 / Id = 90.48 Expect = 1.21e-36 / Id = 30.18 Expect = 3.57e-6 / Id = 33.33 Expect = 1.08e-5 / Id = 32.50 Expect = 7.23e-5 / Id = 35.29 Sequence D8LL26_ECTSI A0A6H5KR13_9PHAE A0A835Z8S6_9STRA A0A6P8R6E9_GEOSA UPI00112BEB79 A0A6G0XJ19_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1
Stop 1
Cds size 1782
Model size 2210
Exons 6
Ec32 ortholog Ec-27_000860.1
Ec32 ortholog description expressed unknown protein
Hectar predicted targeting category signal peptide
BRITE ko00000,ko00001,ko01000
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. I
EC 5.3.3.8
EggNOG OGs COG1024@1,KOG1683@2759
EggNOG free text desc. enoyl-CoA hydratase activity
GOs GO:0003674,GO:0003824,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575
KEGG Pathway ko00071,map00071
KEGG Reaction R04756
KEGG ko ko:K13238
KEGG rclass RC01078
Seed eggNOG ortholog 44056.XP_009036994.1
Seed ortholog evalue 1.3e-12
Seed ortholog score 81.6
Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936501.040479-UTR-E-siliculosus-1a_M_contig94:429916..430259 1622936501.040479-UTR-E-siliculosus-1a_M_contig94:429916..430259 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig94 429917..430259 -
1696251106.9489653-UTR-E-siliculosus-1a_M_contig94:429916..430259 1696251106.9489653-UTR-E-siliculosus-1a_M_contig94:429916..430259 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig94 429917..430259 -
1622936501.158478-UTR-E-siliculosus-1a_M_contig94:434499..434584 1622936501.158478-UTR-E-siliculosus-1a_M_contig94:434499..434584 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig94 434500..434584 -
1696251107.0457542-UTR-E-siliculosus-1a_M_contig94:434499..434584 1696251107.0457542-UTR-E-siliculosus-1a_M_contig94:434499..434584 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig94 434500..434584 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936501.0540257-CDS-E-siliculosus-1a_M_contig94:430259..430677 1622936501.0540257-CDS-E-siliculosus-1a_M_contig94:430259..430677 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 430260..430677 -
1696251106.963501-CDS-E-siliculosus-1a_M_contig94:430259..430677 1696251106.963501-CDS-E-siliculosus-1a_M_contig94:430259..430677 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 430260..430677 -
1622936501.0715518-CDS-E-siliculosus-1a_M_contig94:431050..431235 1622936501.0715518-CDS-E-siliculosus-1a_M_contig94:431050..431235 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 431051..431235 -
1696251106.9734213-CDS-E-siliculosus-1a_M_contig94:431050..431235 1696251106.9734213-CDS-E-siliculosus-1a_M_contig94:431050..431235 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 431051..431235 -
1622936501.0915217-CDS-E-siliculosus-1a_M_contig94:431520..432042 1622936501.0915217-CDS-E-siliculosus-1a_M_contig94:431520..432042 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 431521..432042 -
1696251106.982993-CDS-E-siliculosus-1a_M_contig94:431520..432042 1696251106.982993-CDS-E-siliculosus-1a_M_contig94:431520..432042 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 431521..432042 -
1622936501.109905-CDS-E-siliculosus-1a_M_contig94:432354..432449 1622936501.109905-CDS-E-siliculosus-1a_M_contig94:432354..432449 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 432355..432449 -
1696251106.9958026-CDS-E-siliculosus-1a_M_contig94:432354..432449 1696251106.9958026-CDS-E-siliculosus-1a_M_contig94:432354..432449 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 432355..432449 -
1622936501.1254344-CDS-E-siliculosus-1a_M_contig94:433275..433423 1622936501.1254344-CDS-E-siliculosus-1a_M_contig94:433275..433423 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 433276..433423 -
1696251107.0140674-CDS-E-siliculosus-1a_M_contig94:433275..433423 1696251107.0140674-CDS-E-siliculosus-1a_M_contig94:433275..433423 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 433276..433423 -
1622936501.1399229-CDS-E-siliculosus-1a_M_contig94:434085..434499 1622936501.1399229-CDS-E-siliculosus-1a_M_contig94:434085..434499 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 434086..434499 -
1696251107.0257595-CDS-E-siliculosus-1a_M_contig94:434085..434499 1696251107.0257595-CDS-E-siliculosus-1a_M_contig94:434085..434499 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig94 434086..434499 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17436.1
>prot_E-siliculosus-1a_M_contig94.17436.1 ID=prot_E-siliculosus-1a_M_contig94.17436.1|Name=mRNA_E-siliculosus-1a_M_contig94.17436.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=594bp
MTACKALLFRSALVAILVHAVGGNEFRTALSNDGYTAAAAAAAGRTPAFE EEEAAPVTLASSRAVAADRRSRFEAEADVNTGPDPFFADLEFDVARQGGK EIREPPKKLLLHKVEVYEVESGGLGRRWRQSRTGWTYKDGSSALPPRQVL CPDEWTWASEWKIDGSGGRDEAGWEYSKSLMKFNSFRVPRGRRLADRFRR RRWVRAMQCVRPQREQQQEDLNEVGGLQLESPPDATGIAFPAGTYEFGAE DFRFDLGREDVDLFPAPDIYERGSYRARKPLKLPELGNALTACKGWWAEE FTFRGFGIGFVKPVFRGLLLRPDLGVGVRLPVTLHFRSWESREALPSVAL SLFVLWPPAVQVSQAMSYPAELLQELATTAARKIVVPSKEAIQVRRRKEA VQRLGVSIGVRYSSTYGFQWWLSPYFFLLPGVRVLWTLYQSMMTLLLSSL ALMQRSDASGLDRENGRAENQEALWVVALRSWAAEKTSGLGYALYLSGNR LGGAAYVNFMPFFLPTLRAATSRDSSGVKEPGAEQHEQGVDDVAAPVQED AGTREAVASDVVVGVTPDGCGAESNATEAEQQREGAVLQPISA* back to top mRNA from alignment at E-siliculosus-1a_M_contig94:429917..434584-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig94.17436.1 ID=mRNA_E-siliculosus-1a_M_contig94.17436.1|Name=mRNA_E-siliculosus-1a_M_contig94.17436.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4668bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:429917..434584- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)GGTCACGGCACACACTCATCTGCGCTGTACTAGACTGCGGAGACTGGTTC
GCTGTCCCCTCTCAGGGATCGAGAACGCGTCCTCC ATGACGGCGTGCAAG
GCGCTGCTGTTCCGCTCGGCGCTTGTCGCAATACTAGTCCATGCCGTCGG
AGGCAACGAGTTCAGGACAGCACTGAGCAACGATGGATACACAGCAGCAG
CAGCAGCAGCAGCAGGTCGCACGCCAGCGTTCGAAGAAGAAGAAGCTGCG
CCCGTCACGCTGGCATCTTCCCGAGCAGTTGCAGCCGACAGGAGAAGCAG
GTTCGAAGCGGAAGCCGACGTGAATACAGGTCCCGATCCGTTCTTCGCAG
ATCTTGAGTTCGACGTGGCAAGACAGGGCGGCAAGGAGATTCGCGAGCCA
CCGAAGAAGCTCTTGTTGCACAAGGTTGAGGTCTACGAGGTGGAGTCGGG
CGGGCTTGGGAGGAGATGGCGACAGTCAAGGACGGGCTGGACGTACAAG G
TACACACGTGGGAGGCGTTTTGTTCAGTGCTGGCGAGCTTGTTGTGTGAT
TTCACTGTAAATTGAATAATGCCATGTTCTCGCCGTTTGTTCTTATATCG
GGCAAATTCGATGACGTTTCAAAATTCAACTTTGTAGGTCCCACGCAAGA
TCTCTCCCGTTCCCGTGTTCTCTCCTCCCAAGCCCATTTATTTCTCTCCC
TCTCTCCCGCCTTTGCTTGTATCCATGGCATATCCATGGCATATCACATG
GCGTGCTGCTGACCTACACGTAGTATCCATTATGCTGCAAATGAAGGGAC
TTGAAAAATCATGTTGTCATCAACCGTAACCTTCGTCCGTGCTTCGAACT
CTCGAGCGCCGCCTCGTCGCTGGGCTACCCGCTGCTTGAAAATGTAACAT
TGGCATCGAAGGGATATTGATTTATTCCCCTCCCATCTGCTCTCAACAAG
CTTGGATGCCCAACTATTATACAACAATCAAGCTACCAGGCAAAACAAAA
GTCTCGGACCAGGTCAGGCTGGGATGTACGCGGGTGGACGTGTCGCGTGT
GTTTGCTGTTCAAAGAGCTGCTGCGTGCATGTGTTTTTTCCACATGCCGT
GCATATGCGGTTTTGTCCCATGACTGCAACTAACTCTGTGTTGCCTTGCA
TTCGTGAGCAGGACGGCTCTTCAGCTCTTCCACCAAGACAAGTTCTCTGC
CCTGATGAATGGACCTGGGCTAGCGAATGGAAAATTGATGGGTCGGGAGG
GAGGGATGAGGCGGGCTGGGAATATTCCAAGAGCCTGATGAAGTTTAACT
CATTTCGTG GTGAGGAACGAGTGGGAACGTGCACAGGAGCAGGTGACTGC
GTGTGTAATCCGCTCTCACGTTGGTACCCCAACTTCAGAGCTTTGAAAGT
ACTCGCAAGAACAATGTCCTGTCTAATAAAAGCGCGGTAGCGACGAATCA
TATGTACGCCTAAACGGGAGTAGAACAGGCGATAGTCACTTGTACCCCGT
ACCCACCCGTAGAGACAAGGGTTGATGGTTTCACACGGGTCGGGAAGAAC
GGCACCCTAGGTAGGTGATCTACAAAACTTTCGTCGGGTGAGACAGGGGT
TGCGCTTATTCTCCTCTCAACCCCCCCTTCTTGTGGGAATGATACTGCGT
GCTTCAGCCGTAAGTGTCCCTCGGACACTTACTTTAGCTCTCAAACGCGA
ACAACGTTCTTTTGCGTCGTTTGTGTGCGTTGCTGCACCAGCGGTTCTCG
CGTCAAATTACGTGAGACGGGCGGGTAGTCCGTGCACAGCGGCAGCAGTA
CAAGCCGCCGTGATTTCGATCAACGTTTGTCGCGCGCGAGTTGGGGAGAA
CGCACCGTTGTGCTGTAAAACGTCAAGAAATTGACGTTTCGCACGGGCGG
GAGAGAACACTAGATGTGTTTCGAGAATACAACGCGGCAAACAGTAAAAG
CGATCACACAGGTGTGCTATCCCCCCGACTCTTAAGGGCCGCCAGAGAGA
CGTTCCAAGCGTATGCGTAGTTGTGTTTTCGTGAAATATACTCGGCATAC
TGTTGTGTGCGGTGTTTGGTTGGATTGATGTGGCTAGAGCTTATTCGTCT
TTTCCTACTCCGCTTTTGGAAAATTGTTTTCGCAGTGCCCAGAGGAAGGA
GACTGGCCGATCGATTCCGGCGGCGGCGATGGGTACGGGCGATGCAGTGC
GTGCGGCCTCAGCGGGAGCAGCAGCAGGAG GCAAGATGACAGTCGTAACT
CGATTCATCCAGGGATGCGTGCGTGCCATAAACAACGGCGCTTTGATGCT
CATGGCTTTTGCAGCGAATTCACGTGGAGAGCTTTTCCGGCCTCTTTGCG
TAGGGCCTCCAAAGGCCATGACACAACCGAATGGCGTGGGCGAGCAAAAG
TTAAAAATTACATCGAGTCTTCCCGGCTACGGCTAAAGTGCCGGCACTTG
TGCCGCTGCCGCCAGGATCATTGACACAGGTTCGGCGTCCTGCATCTCAC
CAAGTTGTTCGTGAACCCTTTTTCTGACAAAACTAATTCCAGGATTTAAA
TGAGGTTGGTGGCCTTCAGCTCGAGAGCCCACCAGACGCAACAGGAATAG
CGTTTCCAGCCGGCACGTACGAGTTTGGCGCGGAAGACTTCCGTTTCGAT
CTGGGGAGAGAGGATGTGGACCTGTTCCCCGCGCCAGACATCTACGAACG
CGGCTCGTACAGGGCTCGGAAGCCTCTCAAGCTTCCCGAGCTCGGGAACG
CCCTGACGGCGTGCAAGGGCTGGTGGGCCGAAGAGTTTACCTTTCGAGGC
TTCGGGATCGGCTTCGTGAAGCCGGTGTTCAGGGGCCTCCTCCTGCGGCC
CGACCTCGGTGTGGGGGTCCGCCTGCCCGTGACCCTGCACTTTCGGTCGT
GGGAGAGCAGGGAGGCGCTCCCGTCGGTGGCGCTCTCGCTCTTCGTGCTG
TGGCCGCCCGCGGTGCAGGTGTCGCAGGCGATGTCGTACCCGGCGGAGCT
GCTGCAAGAGCTGGCCACCACCGCGGCGAGGAAGATCGTGGTCCCGTCGA
AGGAAGCGATACAG GTGGGGGGCGGCTGCTTGCCGTATCCGCGGTACAGG
GAGGGTGCACCACAATCGCATCGTGTTTGTTCCCACGCGGGCGTTGTTGC
TTGCGCACGCTTGTCGTTATGTGGCCTTCCCATGTTTTAAGGAAGTAAAC
ATAACCTCACAGAAAGACTACCCGTCCGAGATATTCCCCATGTTTTCGGG
AACCTCGGCACAGCAGTCGCCTCCACAGCACGAAAACGATAAAAGCATAG
GACCTGGTACGTGTCTGTGATGCGCATGAATGCTTCAAACATGCCGCAGG
TTCGCCGCCGCAAGGAAGCCGTCCAGAGACTGGGGGTCAGCATCGGGGTG
CGCTATTCGTCGACATACGGGTTCCAGTGGTGGTTGTCTCCGTATTTCTT
CCTTCTCCCCGGGGTTCGGGTTTTGTGGACGCTGTATCAATCGATGATGA
CGTTGCTGCTGTCGAGCTTGGCTCTGATGCAAAG GTGCGTGGCCCCATAG
ATGCTGGTTAACCCGTTTCCATGTGAGAAGCATGAGGAATTATGTTGTTC
AGCAGTGGTCCCCGTATGAATGCCGGTTGATTCGTACTCTGAACAGTGCC
GGTTGCCCACTATGATGCCGGTTCAAGGGGCTGGCACCTACTGGCATCAT
ATTGTAGCTGGACCACTTCTTTGAGTGCGAGGCGTGGGCCGTCTGTTCAC
AGCTGCAGCTTTTAATTTCTCGACGCAAGCATGACGAGGTGGGAGTTGAG
AGGGCGTTGAGGATGCCATGTGCTTACTACTCGCTCAGTAGTTGTGGCAC
TTCCAGACAGAGTGATCAATTTTACCCGTTCGGGTGTCTTGTCTCACTGG
CACGCAGGTCGGATGCCAGTGGTCTCGACCGAGAGAACGGGAGAGCCGAG
AACCAAGAAGCGCTGTGGGTTGTGGCGTTGCGTAGCTGGGCGGCTGAGAA
GACGTCGGGCTTGGGCTACGCCTTGTACTTGTCCGGCAACCGCTTGGGCG
GAGCCGCCTACGTGAACTTCATGCCGTTCTTCCTCCCAACCTTGAGAGCG
GCGACGTCCCGGGATAGCAGCGGCGTTAAGGAACCAGGCGCAGAGCAGCA
CGAACAAGGCGTCGATGATGTTGCCGCACCCGTCCAGGAGGATGCCGGGA
CTCGAGAGGCGGTGGCCAGTGATGTTGTTGTTGGGGTAACCCCGGATGGT
TGCGGTGCCGAGTCGAATGCGACCGAGGCTGAGCAGCAGCGCGAAGGTGC
CGTGTTGCAGCCAATCTCTGCGTAG AACAGAGCGCGTCGGTAGGTTTGTG
TAACACACGCATGCGAGTTTTTGAGACTGTACAGATTGTTGCGGAGTGTG
CTGTAGATAAAGAAAAGGAGGCCAGGGCTTGTATGGATCTTAGGTCGAAG
GCGACGGTCTGCTAAAGTGTGTTCCTTTACGGCCGTTGCTGTCCCGAGTG
GAGAGGGAGGAAACCTGGTTGTTGCAAAAGAAATGGTGGCCGCAGTGTTT
TATTGGTCGATTTTTTTGAAGGGAAATTTCTGATTGGTTAAGAATCCCTG
GTCGACCGGTGACGTCATCGATGGCGGTGTCACCATGTTCTAGACAAATT
CAAATATTTCAAACTGAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:429917..434584-
>mRNA_E-siliculosus-1a_M_contig94.17436.1 ID=mRNA_E-siliculosus-1a_M_contig94.17436.1|Name=mRNA_E-siliculosus-1a_M_contig94.17436.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3564bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:429917..434584- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) ATGACGGCGTGCAAGGCGCTGCTGTTCCGCTCGGCGCTTGTCGCAATACT AGTCCATGCCGTCGGAGGCAACGAGTTCAGGACAGCACTGAGCAACGATG GATACACAGCAGCAGCAGCAGCAGCAGCAGGTCGCACGCCAGCGTTCGAA GAAGAAGAAGCTGCGCCCGTCACGCTGGCATCTTCCCGAGCAGTTGCAGC CGACAGGAGAAGCAGGTTCGAAGCGGAAGCCGACGTGAATACAGGTCCCG ATCCGTTCTTCGCAGATCTTGAGTTCGACGTGGCAAGACAGGGCGGCAAG GAGATTCGCGAGCCACCGAAGAAGCTCTTGTTGCACAAGGTTGAGGTCTA CGAGGTGGAGTCGGGCGGGCTTGGGAGGAGATGGCGACAGTCAAGGACGG GCTGGACGTACAAGATGACGGCGTGCAAGGCGCTGCTGTTCCGCTCGGCG CTTGTCGCAATACTAGTCCATGCCGTCGGAGGCAACGAGTTCAGGACAGC ACTGAGCAACGATGGATACACAGCAGCAGCAGCAGCAGCAGCAGGTCGCA CGCCAGCGTTCGAAGAAGAAGAAGCTGCGCCCGTCACGCTGGCATCTTCC CGAGCAGTTGCAGCCGACAGGAGAAGCAGGTTCGAAGCGGAAGCCGACGT GAATACAGGTCCCGATCCGTTCTTCGCAGATCTTGAGTTCGACGTGGCAA GACAGGGCGGCAAGGAGATTCGCGAGCCACCGAAGAAGCTCTTGTTGCAC AAGGTTGAGGTCTACGAGGTGGAGTCGGGCGGGCTTGGGAGGAGATGGCG ACAGTCAAGGACGGGCTGGACGTACAAGGACGGCTCTTCAGCTCTTCCAC CAAGACAAGTTCTCTGCCCTGATGAATGGACCTGGGCTAGCGAATGGAAA ATTGATGGGTCGGGAGGGAGGGATGAGGCGGGCTGGGAATATTCCAAGAG CCTGATGAAGTTTAACTCATTTCGTGGACGGCTCTTCAGCTCTTCCACCA AGACAAGTTCTCTGCCCTGATGAATGGACCTGGGCTAGCGAATGGAAAAT TGATGGGTCGGGAGGGAGGGATGAGGCGGGCTGGGAATATTCCAAGAGCC TGATGAAGTTTAACTCATTTCGTGTGCCCAGAGGAAGGAGACTGGCCGAT CGATTCCGGCGGCGGCGATGGGTACGGGCGATGCAGTGCGTGCGGCCTCA GCGGGAGCAGCAGCAGGAGTGCCCAGAGGAAGGAGACTGGCCGATCGATT CCGGCGGCGGCGATGGGTACGGGCGATGCAGTGCGTGCGGCCTCAGCGGG AGCAGCAGCAGGAGGATTTAAATGAGGTTGGTGGCCTTCAGCTCGAGAGC CCACCAGACGCAACAGGAATAGCGTTTCCAGCCGGCACGTACGAGTTTGG CGCGGAAGACTTCCGTTTCGATCTGGGGAGAGAGGATGTGGACCTGTTCC CCGCGCCAGACATCTACGAACGCGGCTCGTACAGGGCTCGGAAGCCTCTC AAGCTTCCCGAGCTCGGGAACGCCCTGACGGCGTGCAAGGGCTGGTGGGC CGAAGAGTTTACCTTTCGAGGCTTCGGGATCGGCTTCGTGAAGCCGGTGT TCAGGGGCCTCCTCCTGCGGCCCGACCTCGGTGTGGGGGTCCGCCTGCCC GTGACCCTGCACTTTCGGTCGTGGGAGAGCAGGGAGGCGCTCCCGTCGGT GGCGCTCTCGCTCTTCGTGCTGTGGCCGCCCGCGGTGCAGGTGTCGCAGG CGATGTCGTACCCGGCGGAGCTGCTGCAAGAGCTGGCCACCACCGCGGCG AGGAAGATCGTGGTCCCGTCGAAGGAAGCGATACAGGATTTAAATGAGGT TGGTGGCCTTCAGCTCGAGAGCCCACCAGACGCAACAGGAATAGCGTTTC CAGCCGGCACGTACGAGTTTGGCGCGGAAGACTTCCGTTTCGATCTGGGG AGAGAGGATGTGGACCTGTTCCCCGCGCCAGACATCTACGAACGCGGCTC GTACAGGGCTCGGAAGCCTCTCAAGCTTCCCGAGCTCGGGAACGCCCTGA CGGCGTGCAAGGGCTGGTGGGCCGAAGAGTTTACCTTTCGAGGCTTCGGG ATCGGCTTCGTGAAGCCGGTGTTCAGGGGCCTCCTCCTGCGGCCCGACCT CGGTGTGGGGGTCCGCCTGCCCGTGACCCTGCACTTTCGGTCGTGGGAGA GCAGGGAGGCGCTCCCGTCGGTGGCGCTCTCGCTCTTCGTGCTGTGGCCG CCCGCGGTGCAGGTGTCGCAGGCGATGTCGTACCCGGCGGAGCTGCTGCA AGAGCTGGCCACCACCGCGGCGAGGAAGATCGTGGTCCCGTCGAAGGAAG CGATACAGGTTCGCCGCCGCAAGGAAGCCGTCCAGAGACTGGGGGTCAGC ATCGGGGTGCGCTATTCGTCGACATACGGGTTCCAGTGGTGGTTGTCTCC GTATTTCTTCCTTCTCCCCGGGGTTCGGGTTTTGTGGACGCTGTATCAAT CGATGATGACGTTGCTGCTGTCGAGCTTGGCTCTGATGCAAAGGTTCGCC GCCGCAAGGAAGCCGTCCAGAGACTGGGGGTCAGCATCGGGGTGCGCTAT TCGTCGACATACGGGTTCCAGTGGTGGTTGTCTCCGTATTTCTTCCTTCT CCCCGGGGTTCGGGTTTTGTGGACGCTGTATCAATCGATGATGACGTTGC TGCTGTCGAGCTTGGCTCTGATGCAAAGGTCGGATGCCAGTGGTCTCGAC CGAGAGAACGGGAGAGCCGAGAACCAAGAAGCGCTGTGGGTTGTGGCGTT GCGTAGCTGGGCGGCTGAGAAGACGTCGGGCTTGGGCTACGCCTTGTACT TGTCCGGCAACCGCTTGGGCGGAGCCGCCTACGTGAACTTCATGCCGTTC TTCCTCCCAACCTTGAGAGCGGCGACGTCCCGGGATAGCAGCGGCGTTAA GGAACCAGGCGCAGAGCAGCACGAACAAGGCGTCGATGATGTTGCCGCAC CCGTCCAGGAGGATGCCGGGACTCGAGAGGCGGTGGCCAGTGATGTTGTT GTTGGGGTAACCCCGGATGGTTGCGGTGCCGAGTCGAATGCGACCGAGGC TGAGCAGCAGCGCGAAGGTGCCGTGTTGCAGCCAATCTCTGCGTAGGTCG GATGCCAGTGGTCTCGACCGAGAGAACGGGAGAGCCGAGAACCAAGAAGC GCTGTGGGTTGTGGCGTTGCGTAGCTGGGCGGCTGAGAAGACGTCGGGCT TGGGCTACGCCTTGTACTTGTCCGGCAACCGCTTGGGCGGAGCCGCCTAC GTGAACTTCATGCCGTTCTTCCTCCCAACCTTGAGAGCGGCGACGTCCCG GGATAGCAGCGGCGTTAAGGAACCAGGCGCAGAGCAGCACGAACAAGGCG TCGATGATGTTGCCGCACCCGTCCAGGAGGATGCCGGGACTCGAGAGGCG GTGGCCAGTGATGTTGTTGTTGGGGTAACCCCGGATGGTTGCGGTGCCGA GTCGAATGCGACCGAGGCTGAGCAGCAGCGCGAAGGTGCCGTGTTGCAGC CAATCTCTGCGTAG back to top