Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 324 |
| Model size | 326 |
| Exons | 1 |
| Hectar predicted targeting category | mitochondrion |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936489.4299715-CDS-E-siliculosus-1a_M_contig94:425418..425742 | 1622936489.4299715-CDS-E-siliculosus-1a_M_contig94:425418..425742 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 425419..425742 + |
| 1696251101.4924586-CDS-E-siliculosus-1a_M_contig94:425418..425742 | 1696251101.4924586-CDS-E-siliculosus-1a_M_contig94:425418..425742 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig94 425419..425742 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936489.4495485-UTR-E-siliculosus-1a_M_contig94:425742..425743 | 1622936489.4495485-UTR-E-siliculosus-1a_M_contig94:425742..425743 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 425743..425743 + |
| 1696251101.5051117-UTR-E-siliculosus-1a_M_contig94:425742..425743 | 1696251101.5051117-UTR-E-siliculosus-1a_M_contig94:425742..425743 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 425743..425743 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17435.1 >prot_E-siliculosus-1a_M_contig94.17435.1 ID=prot_E-siliculosus-1a_M_contig94.17435.1|Name=mRNA_E-siliculosus-1a_M_contig94.17435.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=108bp
FNSSCRAQVTRVSSSGLRNAKTCNGKEFKVVTALVYTDKSHMCEAAPLQT
RPPLQQNLETVRMADGRGVGAAALDAILPTAVNFLIRKLKRTTAAVLVKH
AHAYHAR* back to topmRNA from alignment at E-siliculosus-1a_M_contig94:425419..425743+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig94.17435.1 ID=mRNA_E-siliculosus-1a_M_contig94.17435.1|Name=mRNA_E-siliculosus-1a_M_contig94.17435.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=325bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:425419..425743+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TTCAACTCTTCGTGTCGTGCTCAAGTGACTCGTGTCTCAAGCAGTGGCCT
GCGGAATGCCAAAACATGTAACGGCAAAGAGTTCAAAGTCGTCACAGCAC
TCGTCTACACAGACAAATCGCACATGTGCGAGGCAGCACCACTCCAAACC
AGGCCGCCGCTTCAACAAAACTTGGAAACCGTACGGATGGCGGATGGCAG
GGGCGTGGGGGCTGCAGCTCTGGATGCGATCTTGCCAACAGCAGTCAATT
TCTTGATACGAAAATTGAAGCGCACTACTGCGGCTGTGCTTGTGAAACAT
GCACATGCATACCATGCGAGATAAC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:425419..425743+ >mRNA_E-siliculosus-1a_M_contig94.17435.1 ID=mRNA_E-siliculosus-1a_M_contig94.17435.1|Name=mRNA_E-siliculosus-1a_M_contig94.17435.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=648bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:425419..425743+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TTCAACTCTTCGTGTCGTGCTCAAGTGACTCGTGTCTCAAGCAGTGGCCT
GCGGAATGCCAAAACATGTAACGGCAAAGAGTTCAAAGTCGTCACAGCAC
TCGTCTACACAGACAAATCGCACATGTGCGAGGCAGCACCACTCCAAACC
AGGCCGCCGCTTCAACAAAACTTGGAAACCGTACGGATGGCGGATGGCAG
GGGCGTGGGGGCTGCAGCTCTGGATGCGATCTTGCCAACAGCAGTCAATT
TCTTGATACGAAAATTGAAGCGCACTACTGCGGCTGTGCTTGTGAAACAT
GCACATGCATACCATGCGAGATAATTCAACTCTTCGTGTCGTGCTCAAGT
GACTCGTGTCTCAAGCAGTGGCCTGCGGAATGCCAAAACATGTAACGGCA
AAGAGTTCAAAGTCGTCACAGCACTCGTCTACACAGACAAATCGCACATG
TGCGAGGCAGCACCACTCCAAACCAGGCCGCCGCTTCAACAAAACTTGGA
AACCGTACGGATGGCGGATGGCAGGGGCGTGGGGGCTGCAGCTCTGGATG
CGATCTTGCCAACAGCAGTCAATTTCTTGATACGAAAATTGAAGCGCACT
ACTGCGGCTGTGCTTGTGAAACATGCACATGCATACCATGCGAGATAA back to top
|