mRNA_E-siliculosus-1a_M_contig94.17411.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: D7FIP7_ECTSI (N-acetylglucosaminylphosphatidylinositol deacetylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP7_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 6.960e-161 Identity = 235/253 (92.89%), Postives = 237/253 (93.68%), Query Frame = 2 Query: 197 MTATPSYALRGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRMHVPXXXXXXXXHR 955 M ATPSYALRG VGVVIAHPDDESMFFAPTLTTL R GQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDD+VVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTR TRHTASI GSGSSSSSS LDAFALVTTG+LRKYSGMLDMPWSLAT YGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTF RMHVP XXX HR Sbjct: 1 MAATPSYALRGTVGVVIAHPDDESMFFAPTLTTLGRRGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDVVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRAVTRHTASIAEGSGSSSSSSTLDAFALVTTGILRKYSGMLDMPWSLATSYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFIRMHVPPPPLXXXPHR 253
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A2P6TVW9_CHLSO (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVW9_CHLSO) HSP 1 Score: 181 bits (459), Expect = 5.150e-52 Identity = 103/231 (44.59%), Postives = 136/231 (58.87%), Query Frame = 2 Query: 239 VVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCY------GPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTR 913 +V AHPDDE+MF+APT+ L G R A+LCLS+G+ GLGQ R REL +AC +LG+ D+ +++ P+LQDG + WPADVV+ HV VQ+ + TFD GGVSGH +H AV GV + + SSSS+S + L T G+LRKY+ +LD P + AT G A+ R A A+ AH SQ VWYRRL+++ SRY YVNT R Sbjct: 12 LVTAHPDDEAMFWAPTILALVEQGLRVALLCLSTGNADGLGQLRSRELYRACSLLGMRRQDVTIVDDPQLQDGMQQRWPADVVAEHVAAAVQRLQPSRVYTFDAGGVSGHPNHLAVCAGVLRWWAAAPS------------SSSSASLPQLWQLETVGLLRKYAALLDAPLAWATTALQRQRRGRGQAAWHLCRQPRRAQQALLAHSSQMVWYRRLWLLLSRYMYVNTLVR 230
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: E1Z3W5_CHLVA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3W5_CHLVA) HSP 1 Score: 175 bits (444), Expect = 7.480e-50 Identity = 101/232 (43.53%), Postives = 134/232 (57.76%), Query Frame = 2 Query: 242 VIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWS----LATCYGPPLG----AFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTR 913 V AHPDDESMFFAP + L G + +LCLS+G+ +GLGQ R +EL AC +LG+E DDIV+++ P L DG + WP VV++HV V++F Q + TFD GGVSGH +H A GV + TG SSS S+ + + L T G+ RKY +L++P S L + P R AW A+ AH SQ VWYRRL+++ SRY Y+NTF R Sbjct: 5 VTAHPDDESMFFAPAILRLVEQGLQVVLLCLSTGNAHGLGQLRSQELRHACSLLGIEADDIVLVDDPSLPDGMLQQWPPAVVATHVAQAVRRFKPQQVYTFDAGGVSGHPNHLATCAGVLRWW------------TGTPSSSSLSNLPELWQLETVGLPRKYLALLEVPLSHLLTLLRRWQKPHPQKSLCIVVRARPRQAWRALLAHRSQMVWYRRLWLVMSRYMYINTFVR 224
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A836C9C4_9STRA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C4_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.060e-47 Identity = 101/232 (43.53%), Postives = 130/232 (56.03%), Query Frame = 2 Query: 236 GVVIAHPDDESMFFAPTLTTLERGGQRAA----VLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDM--PWS--LATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTF 907 G+VIAHPDDE+MFF PTL L GG + VLCLS+G+F GLG+ R +EL+ +C G+ D++ V+ LQDG E WPA+ V+ +V FVQ+ I +LTFD+ GVSGH +H AV RGV L T A + L + + RKY G+LD+ W L C S R W AMAAH SQ VW+RRLF++FSRY YVNT+ Sbjct: 13 GLVIAHPDDEAMFFGPTLKAL--GGASPSIVVHVLCLSTGNFCGLGKLRHQELLLSCSRFGISMDNVEVVNDAALQDGKDECWPAEAVARYVGSFVQRRSIDLLLTFDQHGVSGHPNHIAVCRGVTTLLHTCKARLP-----------------PVYVLQSVSLARKYIGVLDVLGTWQSRLHRCV---------SLDPRQIWCAMAAHRSQLVWFRRLFMLFSRYTYVNTY 216
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A6A5BWQ8_NAEFO (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BWQ8_NAEFO) HSP 1 Score: 171 bits (434), Expect = 8.560e-47 Identity = 100/252 (39.68%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 233 VGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGV---------------------EEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALF---LRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916 VG++I+HPDDE+MFF P + +L +LCLS+G+ GLGQ R REL ++C LGV E + IV+++H +L+DG + W ++++ V+ FVQKF I TILTFDE G+S H +H A GV F H +D F L T+ ++RKY G+LD+ SL + F + S AW AM AHHSQFVW+R+LFV+FSRY +VNTFT++ Sbjct: 123 VGIIISHPDDEAMFFTPIIVSLVEQNIPIHILCLSTGNVLGLGQERIRELERSCIELGVCNSNSDSSLSLVKSLSDLIRSENNKIVIVDHDELKDGMRQTWNTELIAQLVYKFVQKFNISTILTFDERGISDHPNHIATWNGVREFKIRCEREKCFNH----------------VDVFQLETSSLIRKYLGVLDLIVSLHKNSDHNVTIF--TPSPLFAWKAMRAHHSQFVWFRKLFVLFSRYTFVNTFTKL 356
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: C5YAR1_SORBI (N-acetylglucosaminylphosphatidylinositol deacetylase n=4 Tax=Andropogoneae TaxID=147429 RepID=C5YAR1_SORBI) HSP 1 Score: 167 bits (423), Expect = 2.930e-46 Identity = 94/228 (41.23%), Postives = 131/228 (57.46%), Query Frame = 2 Query: 239 VVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIA--WAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916 +V+AHPDDESMFFAPT+ L+ G +LC+S GD GLG TRK EL AC L + + + V++HPKLQDG E W +V+ VQ +GI TI+TFD GVSGH +H ++ GV FL G G+ + + L + +LRKYSG +D+ S + + ++ ++R + + AMAAH SQ+VW+RRLFVIFS Y Y N ++ Sbjct: 53 LVVAHPDDESMFFAPTILFLKSKGHSIHILCMSRGDADGLGNTRKEELYHACDTLKIPHEQVKVLDHPKLQDGFHEKWDHGLVAELTVQHVQLWGIDTIVTFDSYGVSGHPNHKDLHHGVCKFLHAN-----------GQGND------ETWELASLNILRKYSGPVDIWLSSLISFSRSKQSIYTVVNSRPSKSYEAMAAHRSQWVWFRRLFVIFSSYTYANVLKKI 263
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A6I9SBQ7_ELAGV (N-acetylglucosaminylphosphatidylinositol deacetylase n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9SBQ7_ELAGV) HSP 1 Score: 166 bits (421), Expect = 5.340e-46 Identity = 85/229 (37.12%), Postives = 138/229 (60.26%), Query Frame = 2 Query: 239 VVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSA--RIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRMH 919 +V+AHPDDESMFFAPT+ L G +LC+S+G+ G+G RK EL +AC VL + + +++HP LQDG W ++S+ + D ++ + I +++TFD+ GVSGH +H AV+ G+ + L S +S ++A+ L++T +LRKYSG +D+ S+ P + ++ R ++ AMA H SQ++W+R+LFV+FS Y Y+NT +++ Sbjct: 48 LVVAHPDDESMFFAPTILFLTSEGHNPHILCMSTGNAEGVGNVRKEELYRACAVLKIPLQQVKILDHPDLQDGFNNQWDHKLLSTIIEDEIKMWDIDSLITFDKFGVSGHPNHRAVHHGICMLL-----------------SDNSKRNIEAWELISTNILRKYSGPVDIWLSILCSLSNPGRQMYCIPNSLPRKSYRAMAEHESQWIWFRKLFVLFSNYTYMNTLRKIN 259
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: A0A1J3HJH8_NOCCA (N-acetylglucosaminylphosphatidylinositol deacetylase (Fragment) n=4 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HJH8_NOCCA) HSP 1 Score: 165 bits (417), Expect = 1.450e-45 Identity = 95/248 (38.31%), Postives = 137/248 (55.24%), Query Frame = 2 Query: 185 FWGAMTATPSYAL----RGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916 F+G +++ S L + V VIAHPDDESMFF+PT+ L G VLCLS+G+ +G+G R EL +AC VL V + +++HP LQDG + W D++++ + + V I I+TFD GVSGH +H V+RGV FL+T + A+ L + + RKY G +D+ S+ + G P A + R ++ AMA H SQ+VW+R+LFV FS Y Y NT R+ Sbjct: 15 FFGGTSSSKSAILDDGEKKNVMFVIAHPDDESMFFSPTINYLSSNGYNLHVLCLSTGNAHGMGSIRNDELHRACAVLKVPLKQLKILDHPNLQDGFGQVWGHDLLTNIIEEEVTNHNIHMIITFDNYGVSGHCNHRDVHRGVLKFLQTNSGRN-----------------IKAWELASLNIFRKYLGPVDIWLSILSNKGDPSRAIIVNEHPRKSFEAMAQHLSQWVWFRKLFVSFSSYTYANTLQRI 245
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: L8GUD7_ACACA (N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUD7_ACACA) HSP 1 Score: 166 bits (421), Expect = 1.630e-45 Identity = 107/257 (41.63%), Postives = 145/257 (56.42%), Query Frame = 2 Query: 218 ALRGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYG--LGQTRKREL-VKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASI-------------------TGGSGSSSSSSA-LDAFALVTTGMLRKYSGMLDMPWSLATCYG-----PPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNT 904 A RGP+ VIAHPDDE+MFF P++ L + + +LCLS+GD+ G G+ R +EL A GVLG+++ DI +I+ +L+DG W D ++ V +V + G++T++TFDEGGVS H +H AV GVA FL +T ++ T + S A L F L TT ++RKY G LD+ WS T G P AF+S A AM AHHSQ+VW+RRL V FSRY+YVNT Sbjct: 45 ARRGPILFVIAHPDDEAMFFVPSILALAQSNRSIHLLCLSTGDYEGPSTGKVRTKELYASASGVLGIKKADIKIIDDEELRDGPLNRWNEDRIARIVKAYVDEQGVETVITFDEGGVSAHPNHIAVFHGVARFLALHASTTPSSXXXXXXXXXXXXXXXXXXXXXTAATASPPVPRAELRGFKLETTNLVRKYVGPLDVVWSSLTAQGEMFVAPGWLAFWS------AHRAMQAHHSQYVWFRRLSVPFSRYSYVNT 295
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Match: UPI00053A6B1D (probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase n=4 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A6B1D) HSP 1 Score: 164 bits (415), Expect = 3.810e-45 Identity = 97/251 (38.65%), Postives = 139/251 (55.38%), Query Frame = 2 Query: 185 FWGAMTATPSYAL-------RGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDFYGLGQTRKRELVKACGVLGVEEDDIVVIEHPKLQDGSTEAWPADVVSSHVHDFVQKFGIQTILTFDEGGVSGHSDHTAVNRGVALFLRTRDATRHTASITGGSGSSSSSSALDAFALVTTGMLRKYSGMLDMPWSLATCYGPPLGAFFSSCSARIAWAAMAAHHSQFVWYRRLFVIFSRYAYVNTFTRM 916 F+GA +++ + L + V +IAHPDDESMFF+PT+ L +LCLS+G+ G+G TRK EL +AC VL V + V++HP LQDG + W D+++ + + V K I TI+TFD GVSGH +H V+RGV FL+T RH + A+ LV+ + RKY G +D+ S+ + P + ++ AMA H SQ+VW+R+LFV FS Y Y NT R+ Sbjct: 22 FFGATSSSRATILDDGKTPQKKNVMFIIAHPDDESMFFSPTINYLTSNVDNLHILCLSTGNADGMGNTRKDELHQACAVLKVPLQQLKVLDHPNLQDGFGQVWNHDLLTEIIEEEVTKHDIHTIITFDNYGVSGHCNHRDVHRGVLTFLQTNSG-RH----------------IKAWELVSLNIFRKYCGPVDIWLSILSARKHPSNVIIINEQPWKSFKAMAQHLSQWVWFRKLFVSFSSYTYTNTLNRI 255 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17411.1 >prot_E-siliculosus-1a_M_contig94.17411.1 ID=prot_E-siliculosus-1a_M_contig94.17411.1|Name=mRNA_E-siliculosus-1a_M_contig94.17411.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=254bp MTATPSYALRGPVGVVIAHPDDESMFFAPTLTTLERGGQRAAVLCLSSGDback to top mRNA from alignment at E-siliculosus-1a_M_contig94:158519..160798- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17411.1 ID=mRNA_E-siliculosus-1a_M_contig94.17411.1|Name=mRNA_E-siliculosus-1a_M_contig94.17411.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2280bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:158519..160798- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:158519..160798- >mRNA_E-siliculosus-1a_M_contig94.17411.1 ID=mRNA_E-siliculosus-1a_M_contig94.17411.1|Name=mRNA_E-siliculosus-1a_M_contig94.17411.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1524bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:158519..160798- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |