mRNA_E-siliculosus-1a_M_contig94.17407.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A6H5KBE8_9PHAE (Pyruvate dehydrogenase E1 component subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBE8_9PHAE) HSP 1 Score: 803 bits (2075), Expect = 2.450e-289 Identity = 399/401 (99.50%), Postives = 399/401 (99.50%), Query Frame = 3 Query: 3 AVLQQQRPAAGVAAAAARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPGYIRMPDRSKSVGNIMSDVVV 1205 AVLQQQRP AGVAAAAARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTP YIRMPDRSKSVGNIMSDVVV Sbjct: 15 AVLQQQRPGAGVAAAAARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPAYIRMPDRSKSVGNIMSDVVV 415
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A835Z5P4_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P4_9STRA) HSP 1 Score: 607 bits (1564), Expect = 8.070e-212 Identity = 290/378 (76.72%), Postives = 330/378 (87.30%), Query Frame = 3 Query: 54 RAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPGYIRMPDRSKSVGNI 1187 RAMS+ ITVPF+++ DTH LP +P EA TN+EEL+ YFKLMYTMRRMEITCDTEYKAR IRGFCHLYDGQEAVA G+EAA + +DSWITSYRCHC +L RGGTVES+FAEL G+ EGVS GKGGSMHMY+K+H+F+GGQGIVGAQVPVG GL+FA+KY+ P GE TPVA+AMYGDGAANQGQIWE ANMASLWKLPMI+CIENNQYGMGTSKERSSSN+ YYTMGNHIPG ++DGMNVLM+REG AK+WCS GNGPIY+E DTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIE+VKNLLV + LA+ QELK+IEKDIRKEVQ+ALK AK G+ P EELY +I++ GE V P YIRMPDR+KS+G+I Sbjct: 24 RAMSSGS-ITVPFSREYDTHKLPFEMPKEAVTNKEELLGYFKLMYTMRRMEITCDTEYKARAIRGFCHLYDGQEAVAMGVEAAFDQKDSWITSYRCHCISLLRGGTVESIFAELLGYSEGVSHGKGGSMHMYSKKHNFYGGQGIVGAQVPVGVGLSFAAKYATPPGEKTPVAIAMYGDGAANQGQIWEGANMASLWKLPMIFCIENNQYGMGTSKERSSSNNKYYTMGNHIPGVRMDGMNVLMVREGMKAAKEWCSTGNGPIYVESDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEYVKNLLVQHNLADPQELKNIEKDIRKEVQDALKAAKNGSIPKFEELYKDIYIGGEDNSKIVYPAYIRMPDRAKSIGSI 400
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A4D9DDV1_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDV1_9STRA) HSP 1 Score: 534 bits (1375), Expect = 3.230e-183 Identity = 254/376 (67.55%), Postives = 305/376 (81.12%), Query Frame = 3 Query: 57 AMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWV---AGEKYETPVTPGYIRMPDRSKS 1175 A S++ ITV +K DTHNL + PT AT +EEL+ Y +LMYTMRRMEITCDTEYK RTIRGFCHLYDGQEAVA G+ +A + DSWITSYRCHC AL+RG TVE + +ELFGFKEG +GKGGSMH Y+K H+F+GGQGIVGAQVPVGTGLAFA++Y P GE+ PVA+AMYGDGAANQGQIWEAANMA+LWKLPMI+CIENNQYGMGTS ERSSSN+ Y+TMGN IPG ++DGMNV+ +REG F KD+ GNGP+++E++TYRYHGHSMSDPGTTYRNRDEI R+ RDPIE+VK L+++ L ++K++EK IRKEVQ+ALKKAK G+QPP EEL+ +I+ G +Y P YIRMPDR+KS Sbjct: 32 AFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKDFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKHIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQY-----PPYIRMPDRTKS 402
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: W7TQD1_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQD1_9STRA) HSP 1 Score: 533 bits (1372), Expect = 1.070e-173 Identity = 253/376 (67.29%), Postives = 305/376 (81.12%), Query Frame = 3 Query: 57 AMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWV---AGEKYETPVTPGYIRMPDRSKS 1175 A S++ ITV +K DTHNL + PT AT +EEL+ Y +LMYTMRRMEITCDTEYK RTIRGFCHLYDGQEAVA G+ +A + DSWITSYRCHC AL+RG TVE + +ELFGFKEG +GKGGSMH Y+K H+F+GGQGIVGAQVPVGTGLAFA++Y P GE+ PVA+AMYGDGAANQGQIWEAANMA+LWKLPMI+CIENNQYGMGTS ERSSSN+ Y+TMGN IPG ++DGMNV+ +REG F K++ GNGP+++E++TYRYHGHSMSDPGTTYRNRDEI R+ RDPIE+VK L+++ L ++K++EK IRKEVQ+ALKKAK G+QPP EEL+ +I+ G +Y P YIRMPDR+KS Sbjct: 671 AFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQY-----PPYIRMPDRTKS 1041
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A7S1Z3N8_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3N8_TRICV) HSP 1 Score: 499 bits (1284), Expect = 1.620e-169 Identity = 244/386 (63.21%), Postives = 297/386 (76.94%), Query Frame = 3 Query: 21 RPAAGVAAAAARAMSTEK-QITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPGYIRMPDRSKS 1175 R AA AAAAR MS++ T T + HNL ++ELM +F+LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVATGI AA +D WITSYRCHC ALARGG+V +V +ELFG EG+S+ KGGSMH YNK+H F+GG GIVGAQVPVG GL+FA+KY+A GED VA+A YGDGAANQGQIWEAANMASLWKLPMI+CIENN YGMGTS +R SS+S YY MGNHIPG ++DGMN+L ++ G +F +D+CS GNGP+Y+E+ TYRYHGHSMSDPGTTYRNR+EIA R+ RDP+EFVK L+D G A+A E+K++EK IR+EVQE + +AK G +P EEL+ +++ + + P +IRMPD +KS Sbjct: 14 RKAAAPRAAAARFMSSDNPSATFDLTGSFEVHNLESEPENTIDMTKDELMKHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAALAPEDDWITSYRCHCQALARGGSVGAVISELFGMVEGMSKAKGGSMHFYNKKHHFWGGAGIVGAQVPVGVGLSFANKYNAKPGEDMNVAIACYGDGAANQGQIWEAANMASLWKLPMIFCIENNHYGMGTSIDRHSSHSDYYKMGNHIPGIRIDGMNLLAVKRGMSFVRDFCSSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKTLMDAGFADADEIKEVEKRIRREVQEEVSEAKKGNRPGLEELFKHVYAKSMEKDDYEYPPHIRMPDHAKS 399
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A7S3Q1P9_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1P9_9STRA) HSP 1 Score: 498 bits (1282), Expect = 3.360e-169 Identity = 252/382 (65.97%), Postives = 298/382 (78.01%), Query Frame = 3 Query: 51 ARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEEL---YSNIW---VAGEKYETPVTPGYIRMPDRSKSV 1178 ARAMS++ +T T +THNL + E T ++EEL+ +F+LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVATGI AA + +DSWITSYRCHC ALARGG V + AELFG K G++ GKGGSMH Y+K+++FFGGQGIVGAQVPVGTGLAFA+KY+A GED VA+A YGDGAANQGQIWEAANMASLWKLPMI+CIENN YGMGTS ER SS+S YY MGNHIPG ++DGMN+L ++EG F K+ C GNGP+Y+E+ TYRYHGHSMSDPGTTYRNR+EIA R+ RDP+EFVK L++ G AEA E+K IEK IRKEVQ KKAK + PD EL + ++ +AG K E +IRMPD +KSV Sbjct: 27 ARAMSSDS-VTFDLTGSFETHNLDTAPNNEITMSKEELLGHFQLMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDKEDSWITSYRCHCIALARGGKVNEILAELFGNKGGMTDGKGGSMHFYSKKNNFFGGQGIVGAQVPVGTGLAFANKYNAKPGEDMNVAIACYGDGAANQGQIWEAANMASLWKLPMIFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNILAVKEGMRFVKEHCGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAMTRSTRDPLEFVKKTLMEAGFAEADEIKSIEKRIRKEVQAETKKAK---EYPDVELSDMFDYVYADEMAGRKQEK---QDFIRMPDYAKSV 401
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A8J2SEA3_9STRA (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA3_9STRA) HSP 1 Score: 496 bits (1276), Expect = 1.710e-168 Identity = 250/377 (66.31%), Postives = 286/377 (75.86%), Query Frame = 3 Query: 51 ARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPD-EELYSNIWVAGEKYETPVTPGYIRMPDRSKSV 1178 AR +E ITV F H L A TN+ EL+ YFK MYTMRRMEITCD EYKARTIRGFCHLYDGQEA+ TG++AA + +DSWITSYRCHC ALARGGTVE V AEL G G + GKGGSMH YNKEH+FFGGQGIVGAQVPVGTGLAFA+KY P GE PVA+ YGDGAANQGQIWE+ NMA+LWKLPMI+CIENNQYGMGTS RSS N+ YYTMGN IPG K+DGMNVL +REG +D+ S+GNGP+ +E+ TYRYHGHSMSDPGTTYRNRDEIA+MR RDPIEFVKNLL+++ A ELK IEKD+R EV A +AK G+ P +EL NI++ E + P YIRMPD KS+ Sbjct: 15 ARRTLSEASITVDFPGAYTAH-LGDEPAATAETNKTELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGVQAALSPEDSWITSYRCHCIALARGGTVEGVLAELMGQSHGQTGGKGGSMHFYNKEHNFFGGQGIVGAQVPVGTGLAFANKYKTPLGEPMPVAIGCYGDGAANQGQIWESMNMAALWKLPMIFCIENNQYGMGTSISRSSCNNDYYTMGNVIPGLKMDGMNVLSVREGMKHVRDYVSQGNGPMVVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRQTRDPIEFVKNLLLEHTDATEDELKAIEKDVRAEVAAACDRAKAGSPPSSIDELVGNIYLDAEGKDVPQP--YIRMPDYEKSI 388
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: F0Y4Q8_AURAN (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Q8_AURAN) HSP 1 Score: 493 bits (1270), Expect = 1.380e-167 Identity = 254/386 (65.80%), Postives = 294/386 (76.17%), Query Frame = 3 Query: 27 AAGVAAAAARAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDE--ELYSNIWVAGEKYETPVTPGYIRMPDRSKSV 1178 AA AA++AR+MS +T+ F TH A T++EEL+ YFK MYTMRRMEITCD EYKARTIRGFCHLYDGQEA+ TGI AA + +DSWITSYRCHC LARGGTVE V AEL G G + GKGGSMH YNKE +F+GGQGIVGAQVPVGTGLAFA+KY P GE PVA+ YGDGAANQGQIWEAANMA+LWKLPMI+CIENNQYGMGTS RSSSN+ YYTMGN IPG K+DGMNVL +REG KD+ GNGP+Y+E+ TYRYHGHSMSDPGTTYRNRDEIA+MR+ RDPIE VK +LVD+ A +ELK +EK IRKEV +A +AK G PPD +L +NI++ + P YIRMPD +KS+ Sbjct: 10 AARPAASSARSMSA---VTIEFPGAYATHRCEAP-DAVAETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLEDSWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQVPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSISRSSSNNDYYTMGNLIPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRKEVADACDRAKAGA-PPDSIADLTNNIYLTEDGKSEP--QAYIRMPDYTKSI 388
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: K0S2Z1_THAOC (E1_dh domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S2Z1_THAOC) HSP 1 Score: 493 bits (1269), Expect = 4.250e-167 Identity = 241/375 (64.27%), Postives = 288/375 (76.80%), Query Frame = 3 Query: 54 RAMSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDE-ELYSNIWVAGEKYETPVTPGYIRMPDRSKS 1175 R MS+ ++T T +THNL + T ++EL+S+F+LMYTMRRMEITCD EYKAR IRGFCHLYDGQEAVATGI AA + +DSWITSYRCHCTALARGGTVESV ELFG G ++GKGGSMH YNK H+FFGGQGIVGAQVPVG GLAF + Y+A GE VA+A YGDGAANQGQIWEAANMASLWKLPM++CIENN YGMGTS ER SS+S YY MGNHIPG ++DGMNVL ++EG F KD+ GNGP+Y+E+ TYRYHGHSMSDPGTTYRNR+EIA R+ RDP+EFVK L+D G A+A+++K+ EK IRK+V +K AK +P E L+ ++ + E P +IRMPD +KS Sbjct: 35 RQMSSSDEVTFDLTGSFETHNLETAPSDTITMTKDELLSHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDLEDSWITSYRCHCTALARGGTVESVLGELFGNAGGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFTNHYNAKPGETMNVAIACYGDGAANQGQIWEAANMASLWKLPMVFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDFVGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKKTLIDAGFADAEQIKETEKRIRKDVASQVKAAKASPKPTVEPHLFEYVFTSDGGKEQNEFPPHIRMPDFAKS 409
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Match: A0A7S0GGJ8_9STRA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GGJ8_9STRA) HSP 1 Score: 488 bits (1257), Expect = 2.470e-166 Identity = 231/337 (68.55%), Postives = 272/337 (80.71%), Query Frame = 3 Query: 153 REELMSYFKLMYTMRRMEITCDTEYKARTIRGFCHLYDGQEAVATGIEAATNHQDSWITSYRCHCTALARGGTVESVFAELFGFKEGVSRGKGGSMHMYNKEHSFFGGQGIVGAQVPVGTGLAFASKYSAPAGEDTPVALAMYGDGAANQGQIWEAANMASLWKLPMIYCIENNQYGMGTSKERSSSNSTYYTMGNHIPGFKLDGMNVLMIREGFAFAKDWCSKGNGPIYIEVDTYRYHGHSMSDPGTTYRNRDEIASMRTARDPIEFVKNLLVDNGLAEAQELKDIEKDIRKEVQEALKKAKGGTQPPDEELYSNIWVAGEKYETPVTPGYIRMPD 1163 + ELM++FKLMY MRRMEIT D EYKARTIRGFCHLYDGQEAVATGI++ +DSWITSYRCHC ALARGGT+E V ELFGF G+S+GKGGSMH YNKEH+F+GG GIVGAQVP GTGLAFA+KY+ P GE PVA+A YGDGAANQGQIWE+ANMASLWKLPMI+CIENN YGMGTS ER SS++ Y+ MGNHIPG ++DGMNVL ++EG F K++C+ GNGP+Y+E+ TYRYHGHSMSDPGTTYRNR+EIA R+ RDPIEF+K ++D G A+ELK++EK IRKEVQ +KKAK PP EEL+S I+ +IRMPD Sbjct: 7 QSELMAHFKLMYMMRRMEITFDNEYKARTIRGFCHLYDGQEAVATGIDSVFTQEDSWITSYRCHCVALARGGTIEQVAGELFGFVNGMSKGKGGSMHFYNKEHNFYGGDGIVGAQVPKGTGLAFANKYNTPPGEAMPVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYGMGTSIERHSSHNDYFKMGNHIPGVRIDGMNVLAVKEGMRFVKEFCANGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPIEFLKKTMIDAGFTNAEELKELEKKIRKEVQSQVKKAKESHVPPPEELFSYIYAKDTGKGNQEAVPFIRMPD 343 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17407.1 >prot_E-siliculosus-1a_M_contig94.17407.1 ID=prot_E-siliculosus-1a_M_contig94.17407.1|Name=mRNA_E-siliculosus-1a_M_contig94.17407.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=383bp MSTEKQITVPFTKDIDTHNLPVSLPTEATTNREELMSYFKLMYTMRRMEIback to top mRNA from alignment at E-siliculosus-1a_M_contig94:127538..133208- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17407.1 ID=mRNA_E-siliculosus-1a_M_contig94.17407.1|Name=mRNA_E-siliculosus-1a_M_contig94.17407.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5671bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:127538..133208- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:127538..133208- >mRNA_E-siliculosus-1a_M_contig94.17407.1 ID=mRNA_E-siliculosus-1a_M_contig94.17407.1|Name=mRNA_E-siliculosus-1a_M_contig94.17407.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2298bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:127538..133208- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |