mRNA_E-siliculosus-1a_M_contig94.17391.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: D7FIM7_ECTSI (Phosphoglycerate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM7_ECTSI) HSP 1 Score: 566 bits (1459), Expect = 4.100e-204 Identity = 275/280 (98.21%), Postives = 277/280 (98.93%), Query Frame = 1 Query: 1 MVTTTDRDHHDLPAPEETTTSHRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF 840 MVTTTDRDHH LPAP+ETTTSHRVVFLRHGESTWNRDDRHIGWTDV LTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRY+HVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIV MKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF Sbjct: 1 MVTTTDRDHHHLPAPQETTTSHRVVFLRHGESTWNRDDRHIGWTDVPLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYQHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVTMKVPRATPIVYDLGADMKPLRSPLPDTLLSAELLSVDGAPARMAAADGEVNAF 280
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: UPI000A17839F (2,3-diphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Derxia lacustris TaxID=764842 RepID=UPI000A17839F) HSP 1 Score: 247 bits (630), Expect = 1.860e-78 Identity = 113/227 (49.78%), Postives = 158/227 (69.60%), Query Frame = 1 Query: 64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744 H++V +RHGES WN D+R GWTDV +TE G EA AG+ L++EG+ FD+ F SVLKR ++T + V+DELDQLW+P K +RLNERHYG G K E +G E V +W +Y +AP+P++ D +P+ D RY D D A +P TEC+KD RV+ YW+E IAP ++SGK+V++A H N L+ L+++LDGI DD IV++ +P A P+VY+L D+KP+R Sbjct: 2 HKLVLIRHGESQWNLDNRFTGWTDVDITENGAREAKAAGQLLKQEGYSFDIAFTSVLKRAIRTLNTVLDELDQLWIPVEKHWRLNERHYGALQGLNKSETAAKYGDEQVLVWRRAYAIAPNPLALDDERHPRFDARY---ADLDPAL-LPATECLKDTVARVLPYWDETIAPTLKSGKKVIIAAHGNSLRALIKYLDGISDDDIVSLNIPTARPLVYELDDDLKPIR 224
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: K1Y1M5_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K1Y1M5_9BACT) HSP 1 Score: 245 bits (625), Expect = 9.980e-78 Identity = 108/228 (47.37%), Postives = 157/228 (68.86%), Query Frame = 1 Query: 64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747 ++VV LRHGESTWN+++R GWTDV L+E G EA AG L+KEG+ FDV + SVLKR ++T + +D +D +W+P +++RLNERHYG G K E FG++ V +W SYD+ P+P++TD YP D RY + ++ +P+TEC+KD R + YWE+ IAP V+SGK+VL+A H N L+ L+++LD I DD IV + +P A P+VY+L ++KP++S Sbjct: 2 YKVVLLRHGESTWNKENRFTGWTDVDLSETGIKEATNAGLTLKKEGYTFDVAYTSVLKRAIRTLWLTLDTMDLMWIPVYRNWRLNERHYGALQGMNKSETAAKFGEDQVLVWRRSYDIPPNPLTTDDPRYPGKDPRYSDLTEK----TLPKTECLKDTVARFIPYWEDTIAPAVKSGKKVLIAAHGNSLRALVKYLDNISDDEIVKLNIPTAVPLVYELDKNLKPIKS 225
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A521ZBQ9_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A521ZBQ9_9BURK) HSP 1 Score: 244 bits (624), Expect = 1.410e-77 Identity = 110/227 (48.46%), Postives = 156/227 (68.72%), Query Frame = 1 Query: 67 RVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747 ++V LRHGES WN D+R GWTDV +TE G EA AG LR EGF FDV + SVLKR ++T + V+D +D +W+P +KD+ LNERHYG G K E +G+E V +W +Y +AP+P+S D +P+ D RYK++ D +P TEC+KD RVV YWE+EIAP +R+GK+V++A H N L+ L+++LD I DD IV + +P A P+VY+L ++KP+++ Sbjct: 3 KLVLLRHGESQWNLDNRFTGWTDVDITENGWREACTAGDLLRDEGFTFDVAYTSVLKRAIRTLYTVLDRMDAMWIPVVKDWHLNERHYGALQGMDKAETATKYGEEQVLVWRRAYAIAPNPLSLDDKRHPRFDARYKNLKPSD----LPATECLKDTVDRVVPYWEKEIAPQLRAGKKVIIAAHGNSLRGLVKYLDNISDDAIVKLNIPTARPLVYELDDNLKPIKN 225
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A1J4SB84_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Desantisbacteria bacterium CG1_02_38_46 TaxID=1817893 RepID=A0A1J4SB84_9BACT) HSP 1 Score: 244 bits (623), Expect = 2.000e-77 Identity = 114/227 (50.22%), Postives = 154/227 (67.84%), Query Frame = 1 Query: 67 RVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747 ++V LRHGES WN+++R GWTDV L+EKG EA AG L+ EGF FDV F SVLKR ++T IV+DE+D +W+P +RLNERHYG G K E E FG+E V +W SYD+ P + YP +D RYK + DE G IP TEC+KD R + YW E IAPVV+SGK+V++A H N L+ L+++LD +PDD IV++ +P P+VY+L D+KP+++ Sbjct: 3 KLVLLRHGESEWNKENRFTGWTDVDLSEKGIQEAKKAGDVLKSEGFIFDVAFTSVLKRAIRTLWIVLDEMDLMWIPVYNSWRLNERHYGALQGLNKSEMAEKFGEEQVLIWRRSYDIQPPALEKTDERYPGNDPRYKDL-DEKG---IPLTECLKDTVARFLPYWHENIAPVVKSGKKVIIAAHGNSLRALVKYLDNVPDDKIVSLNIPTGIPLVYELDEDLKPIKN 225
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: UPI0003684418 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Massilia niastensis TaxID=544911 RepID=UPI0003684418) HSP 1 Score: 244 bits (623), Expect = 2.000e-77 Identity = 110/227 (48.46%), Postives = 151/227 (66.52%), Query Frame = 1 Query: 64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744 H++VF+RHGESTWN ++R GWTDV LTEKGEHEA AG L++ GF FD+ + SVLKR ++T + +DE+D +WVP D+RLNERHYG G K E +G V W SYD P P+++D L D RY HV +IP TEC+KD RV+ W EEIAP +R+GK+VL++ H N L+ L++ LDG+ D+ IV + +P P+VY+L A+++P+R Sbjct: 2 HKIVFMRHGESTWNLENRFTGWTDVDLTEKGEHEARSAGAMLKEAGFSFDLAYTSVLKRAIRTLWLTLDEMDMMWVPVKNDWRLNERHYGALSGLNKAETAARYGDAQVLEWRRSYDTPPPPLASDALGKLSSDPRYAHVP----RTSIPHTECLKDTLARVMPAWNEEIAPEIRAGKKVLISAHGNSLRALIKMLDGLSDEAIVGLNIPNGQPLVYELDAELRPIR 224
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A1C7HIQ3_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1C7HIQ3_9BURK) HSP 1 Score: 243 bits (621), Expect = 4.150e-77 Identity = 113/228 (49.56%), Postives = 153/228 (67.11%), Query Frame = 1 Query: 64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLRS 747 +++V +RHGES WN ++R GW DV LTEKG EA LAG+ L+K+GF FD+ + SVLKR ++T I +DELDQL++P IKD+RLNERHYG G K E E FG E V +W SYDV P +S + +P + RY+ E +P TEC+KD +RVV YWE EI P +R GK++L+ H N L+ L++HLD I D IV + +P TP+VY+L +MKP++S Sbjct: 2 YKIVLMRHGESQWNLENRFTGWVDVDLTEKGRKEAALAGQLLKKQGFVFDLCYTSVLKRAIRTLCIALDELDQLYLPVIKDWRLNERHYGALQGLNKKETAEKFGNEQVMIWRRSYDVPPPALSKESPMWPANQSRYRLEDPE----LMPLTECLKDTVKRVVPYWENEIVPKIREGKQILITAHGNSLRALIKHLDNISDADIVGLNIPTGTPLVYELDENMKPIKS 225
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A1G3ZHV3_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10 TaxID=1802433 RepID=A0A1G3ZHV3_9BACT) HSP 1 Score: 243 bits (619), Expect = 8.070e-77 Identity = 110/227 (48.46%), Postives = 153/227 (67.40%), Query Frame = 1 Query: 64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744 +++V +RHGES WN+++R GWTDV L+EKG EA AG L++EGF FD+ F S+LKR LKT IV+DELD+LW+P + +RLNERHYG G K E +G E + +W SYDV P P+ T +P +D RY V E+ +P TEC+KD RV+ YWEE+IAPVVR GK+V++ H N ++ L++HLD + ++ I+ +P P+VY+L D+KPLR Sbjct: 2 YQLVLIRHGESVWNQENRFTGWTDVDLSEKGVIEAKAAGELLKREGFSFDIAFVSLLKRALKTLWIVLDELDELWIPMERSWRLNERHYGALQGLNKSETAAKYGDEKILIWRRSYDVPPPPLETSDERFPGNDPRYADVPKEE----LPLTECLKDTIERVIPYWEEKIAPVVRQGKKVVIMAHGNTIRALMKHLDQLSEEEILHTNIPTGIPLVYELDQDLKPLR 224
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A554WS00_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=5 Tax=Burkholderiales TaxID=80840 RepID=A0A554WS00_9BURK) HSP 1 Score: 242 bits (618), Expect = 1.920e-76 Identity = 111/227 (48.90%), Postives = 152/227 (66.96%), Query Frame = 1 Query: 64 HRVVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744 H++V +RHGESTWN ++R GWTDV LT G +A+ AGR LR+EG++FD+ F SVLKR + T V+DE+D+ W+P +KD+RLNERHYG G K + +G++ V LW SYDV P + D + DRRY H+ E IP TEC+KD RVV YW+E IAP +R+G+RVL+A H N ++ L++HLDGI D IV + +P P+VY+ D++PLR Sbjct: 18 HKLVLIRHGESTWNLENRFTGWTDVDLTPTGIAQAIAAGRLLREEGWDFDLCFTSVLKRAIHTLWYVLDEMDRTWLPVVKDWRLNERHYGALQGLNKADMARQYGEQQVLLWRRSYDVPPPALQPDDPRGQRHDRRYAHLRPEQ----IPLTECLKDTVARVVPYWDEAIAPAIRAGRRVLIAAHGNSIRALIKHLDGISDADIVGLNIPNGVPLVYEFDDDLRPLR 240
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Match: A0A350LK84_9BURK (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Sutterella sp. TaxID=1981025 RepID=A0A350LK84_9BURK) HSP 1 Score: 241 bits (615), Expect = 3.250e-76 Identity = 113/225 (50.22%), Postives = 153/225 (68.00%), Query Frame = 1 Query: 70 VVFLRHGESTWNRDDRHIGWTDVTLTEKGEHEALLAGRALRKEGFEFDVVFASVLKRVLKTEHIVMDELDQLWVPEIKDYRLNERHYGDCIGKTKPEAEEAFGKENVALWASSYDVAPHPMSTDGLYYPKDDRRYKHVVDEDGACAIPRTECMKDVSRRVVGYWEEEIAPVVRSGKRVLVAGHANMLKTLLQHLDGIPDDVIVAMKVPRATPIVYDLGADMKPLR 744 VVF+RHGES WN ++R GWTDV LTEKG+ EA AG +R+ G EFD+ F SVLKR ++T +I +DE D+L++P IKD+RLNERHYG G K E + FG+E V +W SYDV P ++ D YP +D RY +DE +P TEC+KD RV+ YW+E I P V+SG RVLVA H N L+ L++H+DG+ D+ IV + +P P+VY+ +M+P+R Sbjct: 4 VVFMRHGESQWNLENRFTGWTDVDLTEKGQAEARKAGALIREAGLEFDIAFTSVLKRAIRTLYIALDETDRLYLPVIKDWRLNERHYGALQGLNKAETAKKFGEEQVHVWRRSYDVPPPALTKDDPRYPGNDPRYA-FLDE---AQLPLTECLKDTVDRVIPYWKETIEPAVKSGMRVLVAAHGNSLRALIKHIDGMTDEAIVGLNIPTGRPLVYEFDDEMRPIR 224 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17391.1 >prot_E-siliculosus-1a_M_contig94.17391.1 ID=prot_E-siliculosus-1a_M_contig94.17391.1|Name=mRNA_E-siliculosus-1a_M_contig94.17391.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=281bp MVTTTDRDHHDLPAPEETTTSHRVVFLRHGESTWNRDDRHIGWTDVTLTEback to top mRNA from alignment at E-siliculosus-1a_M_contig94:2097..5849- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17391.1 ID=mRNA_E-siliculosus-1a_M_contig94.17391.1|Name=mRNA_E-siliculosus-1a_M_contig94.17391.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3753bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:2097..5849- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:2097..5849- >mRNA_E-siliculosus-1a_M_contig94.17391.1 ID=mRNA_E-siliculosus-1a_M_contig94.17391.1|Name=mRNA_E-siliculosus-1a_M_contig94.17391.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1686bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:2097..5849- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |