mRNA_E-siliculosus-1a_M_contig93.17380.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: D8LSR9_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR9_ECTSI) HSP 1 Score: 249 bits (636), Expect = 8.000e-79 Identity = 223/263 (84.79%), Postives = 224/263 (85.17%), Query Frame = 1 Query: 43 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFGRAGANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKRGLGRRCWNLSPGHGFMMGGDDFFGGGXXXXXFXXXXXXXXXXXXXXXXSNMGGGVSTXXXXX--TTIGADGVRR 825
MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKR YDTYGHEGVASAEQQQSAEGAGASGAQW YNQHN FPHGMRDPFEMFESFFGRAGANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L + NL PGHGFMMG XXX XXXXXXXXXXXXXXXX MGGGVST TTIGADGVRR
Sbjct: 1 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRFYDTYGHEGVASAEQQQSAEGAGASGAQW---YNQHNAFPHGMRDPFEMFESFFGRAGANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFA-------LQQPAGNLFPGHGFMMGXXXXX-----XXXXXXXXXXXXXXXXXXXXXXMGGGVSTSTSTSRSTTIGADGVRR 248
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A6H5JJG7_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG7_9PHAE) HSP 1 Score: 246 bits (629), Expect = 9.200e-79 Identity = 121/127 (95.28%), Postives = 121/127 (95.28%), Query Frame = 1 Query: 43 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFGRAGANN 423
MAGKPCHYEVLGL RSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKR YDTYGHEGVASAEQQQSAEGAGASGAQW YNQ NPFPHGMRDPFEMFESFFGRAGANN
Sbjct: 1 MAGKPCHYEVLGLARSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRFYDTYGHEGVASAEQQQSAEGAGASGAQW---YNQQNPFPHGMRDPFEMFESFFGRAGANN 124
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A7J7JLY2_BUGNE (DNAJB6 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JLY2_BUGNE) HSP 1 Score: 112 bits (280), Expect = 4.530e-27 Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 61 HYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFP-HGMRDPFEMFESFFG 405
+YEVLG+ R+A+S E+KKAYRK+AL WHPDKNP +++A F+L++EAYE+L D EK+++YD YGHEG+ E S G SGA + H PF +DP ++F+ FFG
Sbjct: 8 YYEVLGISRTATSAEIKKAYRKQALQWHPDKNPEKKEEAETRFKLIAEAYEILSDKEKRQIYDKYGHEGLTGNEGG-SRGGPSFSGAG----FYAHQPFSGFHFQDPMDLFQQFFG 118
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A7J6QN53_PEROL (J domain-containing protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QN53_PEROL) HSP 1 Score: 109 bits (273), Expect = 1.090e-24 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 43 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFG 405
MAG +Y+VL + R A+ E+KKAY+K+AL WHPDKNPNNR+ A MF+ V+EAY VL DPEKK++YDTYG +G+ +A + + HQ++ M D F +FE FFG
Sbjct: 1 MAGDTYYYDVLHVSRRATQAEIKKAYKKQALKWHPDKNPNNREAAERMFKEVAEAYGVLSDPEKKQIYDTYGKKGLERGNAPTNAAPTNNAAGGY-HQFD--------MNDAFSVFEQFFG 112
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A7J6RR98_PEROL (J domain-containing protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RR98_PEROL) HSP 1 Score: 110 bits (274), Expect = 1.170e-24 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 43 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFG 405
MAG +Y+VL + R A+ E+KKAY+K+AL WHPDKNPNNR+ A MF+ V+EAY VL DPEKK++YDTYG +G+ +A + + HQ++ M D F +FE FFG
Sbjct: 1 MAGDTYYYDVLHVSRRATQAEIKKAYKKQALKWHPDKNPNNREAAERMFKEVAEAYGVLSDPEKKQIYDTYGKKGLERGNVPTNAASTNNAAGGY-HQFD--------MNDAFSVFEQFFG 112
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A813K4U8_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K4U8_POLGL) HSP 1 Score: 109 bits (272), Expect = 2.580e-24 Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 43 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFG 405
M+G +Y VLG+ R A+ +VKKAYRK+AL WHPDKNP+N++ A ++F+ V+EAYE L PEK++LYD +G EGV G+G H F HG D F +FE FFG
Sbjct: 1 MSGAVDYYGVLGIPRDATEADVKKAYRKEALKWHPDKNPDNKENAEQVFKAVAEAYETLSSPEKRQLYDRFGKEGV----------GSGGXXXXXXXXXXXHGGFGHGGVDAFNVFEQFFG 111
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A6M2DHB1_9NEOP (Putative dnaj molecular chaperone similarity domain protein n=2 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DHB1_9NEOP) HSP 1 Score: 107 bits (268), Expect = 3.090e-24 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 61 HYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFG 405
+Y VL + R AS+ E+KKAYRK AL WHPDKNP+N ++A F+ +SEAYEVL D +K+R+YD YG EG+++ S +G S ++ H FP RDP ++F FFG
Sbjct: 4 YYRVLEVTRGASTAEIKKAYRKLALKWHPDKNPDNSEEANRKFKEISEAYEVLSDDKKRRVYDQYGKEGLSA-----SGGSSGRSRRGHDEDFDMHFGFPFAFRDPEDVFREFFG 113
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A4C1UW21_EUMVA (DnaJ homolog subfamily B member 6-B n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1UW21_EUMVA) HSP 1 Score: 108 bits (271), Expect = 3.590e-24 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1 Query: 61 HYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFG 405
+Y VLG+ R+AS E+KKAYRK AL WHPDKNP+N D+A F+ +SEAYEVL D K+R+YD YG EG+ S +++A+ G ++ FP RDP E+F FFG
Sbjct: 43 YYRVLGVTRTASETEIKKAYRKLALKWHPDKNPDNADEANRRFKEISEAYEVLSDERKRRMYDQYGKEGLNSGRSRRAADDDYDFG---------YSDFPFTFRDPEEVFREFFG 148
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A7S3XGQ5_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XGQ5_9CHLO) HSP 1 Score: 110 bits (274), Expect = 3.720e-24 Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 61 HYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHGMRDPFEMFESFFGRAG 414
+Y++LGL++ AS EVKKAYRK A+ WHPDKNP+NR+ A F+ V EAY+VL DP+KK +YD YG EG+ S Q A G G Q + + R ++FE FFG G
Sbjct: 5 YYQILGLQKGASEDEVKKAYRKLAVKWHPDKNPSNREAAEAKFKEVGEAYDVLSDPQKKEIYDAYGEEGLKSGAPPQGANGQAGGGFPMGGQGGGYQSYSFDQRQAEKIFEQFFGGGG 122
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Match: A0A1V9Y3M4_9ACAR (DnaJsubfamily B member 2-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9Y3M4_9ACAR) HSP 1 Score: 109 bits (272), Expect = 4.540e-24 Identity = 63/133 (47.37%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 43 MAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDKNPNNRDQATEMFRLVSEAYEVLGDPEKKRLYDTYGHEGVASAEQQQSAEGAGASGAQWQHQYNQHNPFPHG-------------MRDPFEMFESFF 402
MAG +Y L L RSAS EVKKAYRK AL WHPDKNPNN+++A F+ +SEAYEVL D +K+R+YD YG EG++ A A G AS Q+ ++H+P+ G RDP E+F FF
Sbjct: 5 MAGTREYYSTLELSRSASPEEVKKAYRKLALKWHPDKNPNNKEEAERRFKDISEAYEVLSDEKKRRIYDKYGKEGLSGA-----AGGHAASARANQYGGSRHHPYSSGAHGGIDELFASFVFRDPEEVFREFF 132 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17380.1 >prot_E-siliculosus-1a_M_contig93.17380.1 ID=prot_E-siliculosus-1a_M_contig93.17380.1|Name=mRNA_E-siliculosus-1a_M_contig93.17380.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=298bp AGHERHPHRERERIMAGKPCHYEVLGLERSASSGEVKKAYRKKALYWHPDback to top mRNA from alignment at E-siliculosus-1a_M_contig93:549254..555708+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17380.1 ID=mRNA_E-siliculosus-1a_M_contig93.17380.1|Name=mRNA_E-siliculosus-1a_M_contig93.17380.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6455bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:549254..555708+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:549254..555708+ >mRNA_E-siliculosus-1a_M_contig93.17380.1 ID=mRNA_E-siliculosus-1a_M_contig93.17380.1|Name=mRNA_E-siliculosus-1a_M_contig93.17380.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1788bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:549254..555708+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |