mRNA_E-siliculosus-1a_M_contig93.17360.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig93.17360.1
Unique Name	mRNA_E-siliculosus-1a_M_contig93.17360.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: D8LST8_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST8_ECTSI)

HSP 1 Score: 843 bits (2179), Expect = 1.430e-304
Identity = 461/480 (96.04%), Postives = 463/480 (96.46%), Query Frame = 1

Query:    1 MLLFHLAGAFLLVSFWHSAGAFRTGAALAQRGCERTRGKHDRICREIEPCSAGRRSLSACVSKGGWCASPQDSTSGPREALAAASRAAVSTMAGSSTEAVGRCGATALSLTRNQLLSSMAAAAAGFLWAPWQASAAADVETTLVSEAASTGPVAAQGEVGGGVEEVAAAKYVVQSDEVGVLFGDGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRSKQKAAADAASPEAAAPDTGDSATAT-AVDPRSGSVGNGGGSASSGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARDNFYTDDPCDAAAVAAGNASGQCKK 1437
            MLLFHL G FLLVSFWHSAGAFRTGAALAQRGCERT GKHDRICREIEPCSAGRRSLSA  SKGGWCASPQDSTSGPREALAA S AAV+TMAGSSTEAVGRCGATA+SLTRNQLLSSMA AAAGFL AP QASAA DVETTLVSEAASTGP A QGEVGGGVEEVAAAKYVVQSDEVGVLFGDGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKR KQKAAADAASPE AAPDTGDSATAT AVDPRSGSVGNGGGSASSGELRVTQVGKKP VCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARDNFYTDDPCDAAAVAAGNASGQCKK
Sbjct:    1 MLLFHLVGGFLLVSFWHSAGAFRTGAALAQRGCERTSGKHDRICREIEPCSAGRRSLSADASKGGWCASPQDSTSGPREALAATSSAAVATMAGSSTEAVGRCGATAVSLTRNQLLSSMATAAAGFLLAPRQASAA-DVETTLVSEAASTGPAAGQGEVGGGVEEVAAAKYVVQSDEVGVLFGDGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRRKQKAAADAASPETAAPDTGDSATATTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARDNFYTDDPCDAAAVAAGNASGQCKK 479

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A835Z5N8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N8_9STRA)

HSP 1 Score: 175 bits (444), Expect = 8.290e-47
Identity = 120/302 (39.74%), Postives = 162/302 (53.64%), Query Frame = 1

Query:  538 VLFGDGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPA-ERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRSKQKAAADAASPEAAAPDTGDSATATAVDPRSGSVGNGGGSASSGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARD-NFYTDDPCDAAAVAAGNASGQCKK 1437
            V F  GP+GI+L +     S  C V V  V  GS+A     +  G GV+ VG     +   P EVA+ I+ +P P+ ++F+ P                                    P   D+ TATA    S  +G         +L V ++  +   CG  ++ GDLIE RY+AR+A D   E+D+SD+RGTG PYAI LG GDVV+GLDLSL+DMC+GERR++E+PA LAYG KG+  FGVP +       +VFGV+LVSIN   + +  RD N+YT DPC+  A  AG ASG C +
Sbjct:    7 VTFESGPVGIELAE--ALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYP------------------------------------PVAEDTPTATAEGAVS--LGTEAPQQPVEQLMVKRL-TRARPCGMVSQEGDLIEIRYTARIA-DTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSA-----LVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDR 261

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A7S0KXW8_9STRA (Peptidylprolyl isomerase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXW8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.280e-27
Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 1

Query:  982 LRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINF 1338
            L + +V     +CG +++ GD++E  Y AR+AS     +DSS++RGTG PY  VLGNGDV+KG+DL LFDMC GE R+++IP+ L YGRKGS  F +P     G   + + VELV +NF
Sbjct:   12 LVIKKVSPPGGICGIKSRRGDVLEINYEARVASPGGPIYDSSEQRGTGQPYQFVLGNGDVIKGVDLGLFDMCPGEVRELDIPSALGYGRKGSILFDIP-----GDVRLWWKVELVRLNF 125

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A0M0J722_9EUKA (Peptidylprolyl isomerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J722_9EUKA)

HSP 1 Score: 110 bits (274), Expect = 7.400e-24
Identity = 62/144 (43.06%), Postives = 86/144 (59.72%), Query Frame = 1

Query:  997 VGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDAR-----DNFYTDDPCDAAAVAAG 1413
             G +   C  +T+A D++E  +S RLAS   +EFDSS+ R +G P+A  LGNGDVV+GLDL   +MC+GE R + +P+RL +G +GSK FGVPPD     A + + V LVSIN   +    R     +  Y++D       AAG
Sbjct:   72 TGPQDPKCAFKTRASDVVEIEFSGRLASS-GLEFDSSEMR-SGRPFAFTLGNGDVVRGLDLGTLEMCIGEERLLLVPSRLGFGTRGSKVFGVPPD-----APLDYRVRLVSINMITDPKARRAEVDDEQRYSEDESGDIVNAAG 208

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A8J6CFR5_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR5_DIALT)

HSP 1 Score: 112 bits (279), Expect = 2.960e-22
Identity = 90/304 (29.61%), Postives = 139/304 (45.72%), Query Frame = 1

Query:  460 AAQGEVGGGVEEVAAAKYVVQSDEVGVLFGDGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKP-AERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRSKQKAAADAASPEAAAPDTGDSATATAVDPRSGSVGNGGGSASSGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARDN 1368
            AA+ + GG + +  A +   +     V F    +G+ L D  +  +   RV V+ ++ GS+A R   +RAG  + A+GG+  A  +  ++V   I  +PRP+ + F     LG                                    D A   A   R          A +   ++ +  +    C  R++ GD IE  Y  RLA       DSS  RG G P+A+ LGNGDV + L+L ++DMC+GE R+I  P RLAYG  G++A GVPP+     A +VF V + +INF  + +  R++
Sbjct:  309 AARADDGGALPDAGAPRDATRERRT-VSFSARSLGLALAD--VDTADGARVAVSRIVPGSEAERT-GVRAGVFLTAIGGEQLAPTVRAEDVRATIARAPRPVALTFAGA--LG-----------------------------------ADEAVGLAAKARR---------AETERFKLERTREPAPNCAIRSRKGDTIEIEYETRLADATQRVIDSSFMRGIGAPFALQLGNGDVPRALELGIYDMCIGEARRIVAPPRLAYGLAGNRALGVPPN-----ATIVFDVTMSAINFQTDPATRRED 557

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A1Z5KS47_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS47_FISSO)

HSP 1 Score: 107 bits (266), Expect = 4.800e-22
Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1

Query: 1003 KKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSIN 1335
            +K   C  +++ GD++E +Y AR  S     +DSS+RRGTG PY +VLG+GD++ G+DL L+DMC GE R ++IP  L YG KG+K F VPPD       + + V+L++IN
Sbjct:  160 QKTTKCSLQSRRGDVLEIKYEARFQSPQGPIYDSSERRGTGRPYQMVLGSGDILAGVDLGLYDMCPGEIRTLQIPPPLGYGPKGNKMFRVPPD-----TTLFWKVQLMTIN 265

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A7S3AIC8_9EUKA (Peptidylprolyl isomerase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AIC8_9EUKA)

HSP 1 Score: 101 bits (252), Expect = 3.160e-20
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 1

Query: 1000 GKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSIN 1335
            G +   C  RT+  D++E  YSA L +D   EFDSS++R +G P+A  LGNGDVV+GL+L   +MC+GE R + +P +LA+G +GSK   VPPD     A VV+ ++L SIN
Sbjct:  142 GPQDPSCRFRTRESDVVEIEYSASLEAD-GREFDSSEQR-SGRPFAFALGNGDVVRGLELGTLEMCIGEERLVHVPPQLAFGSRGSKLLRVPPD-----APVVYRIKLKSIN 246

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A7S2ET29_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ET29_TRICV)

HSP 1 Score: 100 bits (249), Expect = 3.130e-19
Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 1

Query: 1003 KKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSIN 1335
            +K   C  +++ GD++E  Y AR+       +DSS  RGTG PY  VLG+GDV+KG+DL ++DMC GE R++ +P+ LAYGR GSK + +P         V + VELV +N
Sbjct:  259 RKGGSCEIKSRRGDVLEMNYEARVGGRDGQVYDSSAERGTGQPYMFVLGSGDVIKGVDLGMYDMCPGEVRELSVPSELAYGRLGSKLYRIPS-----GFRVWWKVELVRVN 364

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A7S1V2L7_9STRA (Peptidylprolyl isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V2L7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.730e-19
Identity = 52/125 (41.60%), Postives = 79/125 (63.20%), Query Frame = 1

Query:  961 GSASSGELRVTQVGKKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSIN 1335
            G  S   +   +V K+P     +++ GDL+E  YSA +A     E+DSS  RGTG PY +VLG+GD++ G+DL L+DM  GE+R+++IP  L +G +G K FG+P       + +V+ VELV++N
Sbjct:   60 GDTSPAAVYTKRVLKEPPNRILQSRRGDLLEINYSATIAGT-DYEYDSSAIRGTGQPYQMVLGSGDMIPGVDLGLYDMSPGEKRQLDIPQTLGHGPRGRKNFGIPE-----GSSLVWTVELVALN 178

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Match: A0A103Y780_CYNCS (Peptidylprolyl isomerase n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y780_CYNCS)

HSP 1 Score: 90.5 bits (223), Expect = 2.100e-17
Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 1

Query:  964 SASSGELRVTQVG--KKPAVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSIN 1335
            SA SG++   Q+G   KPA C  +   GD I+  Y  +L       FDSS  RGT  P+   LG+G V+KG D  L  MCVGE+RK++IPA++ YG +GS      P    G A ++F  EL+++N
Sbjct:   44 SAKSGDVTELQIGVKHKPASCAVQAHKGDKIKVHYRGKLTD--GTVFDSSFERGT--PFEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGDRGS------PPKIPGGATLIFDTELIAVN 159

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig93.17360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LST8_ECTSI	1.430e-304	96.04	Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835Z5N8_9STRA	8.290e-47	39.74	Peptidylprolyl isomerase n=1 Tax=Tribonema minus T...	[more]
A0A7S0KXW8_9STRA	1.280e-27	48.74	Peptidylprolyl isomerase n=1 Tax=Asterionellopsis ...	[more]
A0A0M0J722_9EUKA	7.400e-24	43.06	Peptidylprolyl isomerase n=1 Tax=Chrysochromulina ...	[more]
A0A8J6CFR5_DIALT	2.960e-22	29.61	Peptidylprolyl isomerase n=1 Tax=Diacronema luther...	[more]
A0A1Z5KS47_FISSO	4.800e-22	45.95	Peptidylprolyl isomerase n=1 Tax=Fistulifera solar...	[more]
A0A7S3AIC8_9EUKA	3.160e-20	47.32	Peptidylprolyl isomerase n=1 Tax=Haptolina ericina...	[more]
A0A7S2ET29_TRICV	3.130e-19	44.14	Peptidylprolyl isomerase n=1 Tax=Trieres chinensis...	[more]
A0A7S1V2L7_9STRA	3.730e-19	41.60	Peptidylprolyl isomerase n=1 Tax=Grammatophora oce...	[more]
A0A103Y780_CYNCS	2.100e-17	41.27	Peptidylprolyl isomerase n=1 Tax=Cynara cardunculu...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig93	contig	E-siliculosus-1a_M_contig93:405098..410003 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1440
Model size	1895
Exons	8
Ec32 ortholog	Ec-15_002640.1
Ec32 ortholog description	Secreted FKBP domain protein
Hectar predicted targeting category	signal peptide
BRITE	ko00000,ko01000,ko03110
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	O
EC	5.2.1.8
EggNOG OGs	COG0545@1,KOG0549@2759
EggNOG free text desc.	peptidyl-prolyl cis-trans isomerase activity
GOs	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048856,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
KEGG ko	ko:K09569
Seed eggNOG ortholog	2880.D8LST8
Seed ortholog evalue	4.5e-245
Seed ortholog score	853.6
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936483.2695742-UTR-E-siliculosus-1a_M_contig93:409548..410003	1622936483.2695742-UTR-E-siliculosus-1a_M_contig93:409548..410003	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig93 409549..410003 +
1696251098.6041377-UTR-E-siliculosus-1a_M_contig93:409548..410003	1696251098.6041377-UTR-E-siliculosus-1a_M_contig93:409548..410003	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig93 409549..410003 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig93.17360.1	prot_E-siliculosus-1a_M_contig93.17360.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig93 405098..409548 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig93:405098..410003+
coding sequence from alignment at E-siliculosus-1a_M_contig93:405098..410003+

protein sequence of mRNA_E-siliculosus-1a_M_contig93.17360.1

>prot_E-siliculosus-1a_M_contig93.17360.1 ID=prot_E-siliculosus-1a_M_contig93.17360.1|Name=mRNA_E-siliculosus-1a_M_contig93.17360.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=480bp
MLLFHLAGAFLLVSFWHSAGAFRTGAALAQRGCERTRGKHDRICREIEPC
SAGRRSLSACVSKGGWCASPQDSTSGPREALAAASRAAVSTMAGSSTEAV
GRCGATALSLTRNQLLSSMAAAAAGFLWAPWQASAAADVETTLVSEAAST
GPVAAQGEVGGGVEEVAAAKYVVQSDEVGVLFGDGPIGIKLGDNPLKASG
VCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIRLS
PRPMEIVFRDPELLGRRLQAEADRKAEAVKRSKQKAAADAASPEAAAPDT
GDSATATAVDPRSGSVGNGGGSASSGELRVTQVGKKPAVCGTRTKAGDLI
EFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCV
GERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINA
SDARDNFYTDDPCDAAAVAAGNASGQCKK*

mRNA from alignment at E-siliculosus-1a_M_contig93:405098..410003+

Legend: CDSpolypeptideUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig93.17360.1 ID=mRNA_E-siliculosus-1a_M_contig93.17360.1|Name=mRNA_E-siliculosus-1a_M_contig93.17360.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4906bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:405098..410003+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCTGCTATTCCACCTCGCGGGTGCTTTCCTCTTGGTGTCGTTTTGGCA
TTCTGCCGGAGCTTTCCGGACTGGCGCGGCCTTGGCGCAGCGAGGCTGCG
AAAGGACCCGCGGCAAACATGACAGAATCTGCCGTGAAATCGAACCTTGT
TCTGCAGGGCGGCGATCGCTCAGTGCTTGCGTGTCTAAAGGGGGGTGGTG
CGCTTCGCCTCAGGATAGCACCAGCGGCCCCAGGGAAGCTCTTGCAGCCG
CAAGCAGGGCTGCTGTTTCAACCATGGCTGGTAGCAGTACCGAGGCTGTT
GGGAGATGCGGTGCAACTGCTCTGTCACTGACTCGAAATCAGCTGCTTTC
CTCGATGGCGGCCGCGGCCGCGGGGTTCCTGTGGGCACCATGGCAAGCCT
CAGCAGCAGCAGATGTGGAGACAACGTTGGTATCGGAAGCAGCGAGCACC
GGGCCTGTGGCAGCGCAGGGGGAGGTCGGTGGGGGTGTGGAAGAGGTGGC
GGCGGCGAAGTACGTGGTGCAATCTGACGAGGTAAAGTGGGAAAGCGGCT
TCTCTTGAAGGATTCAAATGTGCCATGAGTACGTGCGGTAGCTTCTCTCA
AGCTGTGAGGTATTTAGGATCTGCAGATCCTGAACGTTTCCCAACAGAAC
CAATCCCCACCAATGGTAGGTAGGCATGACAACCCACGGACTTCGGCCGG
GAGTCTCACGGTCGACAACCATCCTTGATGGCTTGATTGCCAATTGACGA
AACCAACCCCGCCGGGCAACTGGTCGAACCTCTCTGCAAGGGCCCAACAC
TTTTGAAACGCGTTCGACGATATGATGGATAGCGTCGTACAATTAGCGCC
GGCAGCGAAGAACTTGGCAGTTACTGAAGAAATTGATATAGCCTCTAAAA
CTCAATATCTAGAAGTTGAGACCAACATTTGTGAGCTAACCTATACACTA
AAACCTATACACCGGTCATTCGTAGCGAACCCTAGTATCCCAGCCTCGGC
CGAAACTATTTTGAGTTTCTCTACAGTAGTACGGGCGCCTACTGCTGTGG
ACCGACACAGCCTTGTTTTTTCGTTGGTGGGACAGGTCGGCGTGCTCTTT
GGAGACGGGCCCATCGGTATCAAGCTCGGAGACAACCCTCTCAAGGCTTC
TGGGGTTTGCAGGGTCTACGTTACGGAGGTAAGGCCGGAAAAAAAAATGG
CAGCGTTTATACACCGCAAGAGAAAGCTTGGTTCAATGCGGTGATCTAGC
AGGCAACCACGGTTCTTTAGATGCATAGACTCGGCTGACACGGCAGAACA
TGGGACGCAATCAGCTAGGGCAGTAGCACTTTTTTCGCCCACTGCCGTTG
GGGAAATTGGCTGGAAAGGAGAAACGTCATTTTAGGCCTCGTGGGGTACA
CGTAGTTTAGTGGGGAAAAGAGGGCCTCCTAACCTGTGTTGGTTGATGGC
AACGTTAGTCCATTGCGACGTGCACCATCACTTGTCTCGTGAGACTTATG
TGGGGCACTCGGCATCAGTCACTCGCGGCGTCGTATCAGCAGCTGCGGCA
GGACCCGCAGACGGGTAGTATTTTCAATCCTGGCGGTACTTTTCGTAAGC
GTGCATCGTGTGAGTCGCTGTCCGTGGAGATCGTAACGGCTTACTAACTC
GTGGTACCACATATCGCCGCTGCGAAATCAGACTCATTTCTGCCTCCATC
CACCAAGGCGGTACACGCCAGATGCAGCATGAGAGGCAAGGCGTGTGAGA
CTCGCGATCCGACGTTCCCAACAACGCCATAACCGCTGCTGCGTCTTCCA
TCTCTGTGAAAAAAATGAAGGTACTAACGGGATCGCAAGCGATACGCCAG
GCAAACCTCCGGGCAGGGTTCGGGGTGGCCGCAGTGGGGGGCAAGCCTGC
GGAAAGGCTTGAGCCGAAGGAGGTGGCGGAGCTCATCCGGTTGTCGCCTC
GGCCCATGGAGATCGTCTTCAGGTGCGAGTCTAACCCCCCGAGATGTTGG
GCACCTATCTCGAAGCACGATTTTTCAGGCCACAGGGTGCTTGTTTCACG
CAGGGTTTACACCAAGAGAGACCGCCTCCTCAAAGTTATGGCTTTTTTTT
TATGAAGGGCGCACTTGTTCAGCCCTGCAAGCACGCCGAATGGGGTGGTT
ACGCAAGCTGTGAGATTTTCGCGAGTGTAATAGTGACCATGTCGTCTCGC
CTTATCTAGACTTGTGGCCAATGTGAGTCCGCTGCTTCTGCCGACGCTGT
TCATACTCGTATACGGTTCTCTTTCTCTCCTTTTGGTTTTGAAATCGCGG
GTGCATGATCTTTGTCGCAGTGGCATTCGGCCACGCCTTGCGGGCGGACC
AACTTCTGAGAATGGGGTCGATCTCACCGGCACCCAGCGCCCTCTGTATG
ATAGTCTCGCGTCCGTGTTATCTTCTCTCGGTGTTGTTTTTTTGGCAGGG
ACCCCGAGTTGCTTGGTCGACGACTGCAAGCCGAGGTGGGCAGAGCGGAG
GCGTGTTTTTAGCGAAACTGTCGCGATGCAAGCCTCGGTCGTAGCCACCT
TCTTGTGTAGCATCCTGCGGGCGAGGACAGGGCGCTTGAGTGACGTTCAG
TAACAAAGGTACAGCAGTATCTGGCGTTCTCCTATCGAATCCAACCGCTG
ATCTTCACGCACGGGGAAGACAGCCAAGGGACTCACGGCGGCAGTCTATC
GCCCTAACTTGACCTGATCTTCTTTTTCTCGTGGCCGTTCCGTGGAACAC
CCAGGCAGACAGGAAAGCGGAGGCCGTGAAGCGGAGCAAGCAAAAGGCGG
CCGCCGACGCGGCATCTCCGGAGGCGGCGGCTCCGGACACGGGAGATTCA
GCAACAGCGACGGCCGTTGACCCTCGCAGCGGCAGCGTCGGCAACGGCGG
CGGCAGCGCATCCTCGGGGGAGCTGAGGGTGACGCAGGTGGGCAAGAAGC
CGGCGGTGTGCGGCACGAGGACTAAGGCGGGCGACTTGATCGAGTTCAGG
TGCGGCGGCGGTTTTTCTTTTGGCGGACGGTATCCGGTCTACAGTGAAGT
CATATATAGCGGGCATCCAGCCTTTGCAAATTTTGCGATTGTTTCCTCTC
GGTTCTGTTCAGTTTCGGATTTTGACTTTTCTTGGGTGCTGGTGGTTCTC
TTTTGGTGTTGTTTTGGGGGGCTTCCGCCCTGTACGTTGGCAGCGGGCAA
GGGGAATCGGCAGGCCGTACCGCGCGTGGGTGATACGGGTACCTCTGGAT
ATTTCGATATTTCCTCGTGTCCGTCTTCGTGTTTTCCCTTTGTACCAGTA
CCTTCCCCATGACTTCCTCTTCCCTTATCGTTTTTTTCCGTTGGTGCGTC
CTATGATTGCTGGAGCACGTAGCAGCAGGGTTTGCCATCGTTGCTATTAA
TAGTTGCCTTAGAGTTACTTTTGGAAGGCGTTTTTTTTTTTTCTGTGCCT
ACACCGCCATATGGTGGAAACAAAGAAGTCGTTTTCGGTGCAAAGTGAGG
GTGTTGGCAAACTCAAATTTATCAGTTCTCTGCTTCTGCCTGCTTCTGCT
GCTGCATGCGGCTACTGGTGCGGATGTTGATCGAAATTCGCGGACCGAAT
GAATTCAGGTACTCTGCACGGTTGGCGAGCGATCTGTCGGTGGAGTTTGA
TTCCAGCGACCGCAGGGGGACGGGGCTTCCATATGCGATCGTCCTGGGGA
ACGGCGATGTGAGACTACAACCCCGACTCGAGTTTCCGACAGTGTGGGAG
GATGCAATCGCGCGAAGGGGGGAAGCATCTGGTAGAGAGTATACCACCCT
GCTGTGCATTCACGGGGCCCCCGTTGCCCCCTACGATGTTGCCCATCTTT
GCGATCGCCATCGCGCCTTTACCGGAGTTGTAGCGTTGGCCATCGTCTGC
TAGGTTTCGTCCGCGCAGTGGTTTCTCTTGCGGAGCAGAAAACGTTGCTC
TTCCTCTATTTTGTTGCAGGTGGTAAAAGGGTTGGATTTGTCACTGTTCG
ACATGTGCGTCGGCGAGCGGAGAAAGATAGAGATTCCTGCCCGCCTGGCT
TACGGGAGGAAGGGGAGCAAGGCCTTCGGAGTGCCTCCGGATGACGGAAC
GGTGAGAGAAACAACCAACACACCTTGTTGTGCCTAACAAGTGTATTCAG
GTCGGTTTTCCCTGTGGTTATCGTTCTTTCGGCCGTTTATTCCATGCCAT
CACCCCCCCCCGCCCCCCCCCCTGTTTTCGGTTCCCCATAACCTTCCTCC
ATGCCTACCGGTACTTCTCCATACGTAACAACGACGACGACTTAACAACA
GGGCTCCGCCGACGTGGTGTTCGGAGTCGAGCTCGTGAGCATCAACTTCT
CGATCAACGCGTCGGACGCGAGGGACAACTTCTACACGGACGATCCTTGC
GACGCGGCCGCCGTCGCCGCCGGAAACGCCAGCGGGCAGTGCAAGAAATG
ATGAGCGTGGAAAACAAACAGCCATTAGAGGCTCGCTTCGCTCCGCGTCG
GATGTGAATCCTGCTGTTCGTTGAGAGACTTTTCACAGAAGCATTGGTCG
GCCAGTTAGAGCACTCGATGCAAAACCAAACGAAGAAACAAACTCACAAG
ACCCATGGTCGGGAGATCGGGGGGCGTGCTCCAAAACCAGCAGCGGCAGA
TGGTTTCATACGTCGCACGGTGACTGGTGACTGGTAGCACCAGTATTTTT
TCGAGCAACAAGTGCTTGTGCAGGGGGGTAGAATACGGAGAAGGTGATTT
CTCCCTGAAAGGGGGCCATGACGAATTGTCGCCTTCATCCTCTAATGTTA
ACTACAGAGCGCGCGTCCAAGGTTGCGCGGAGAAAGCAAGTGCTGCTGGG
ACGAAATGACTGCGGCCGTCTCCCGGCTTTATGCAGCGGTGAAGAAGCAC
GGAGAC

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:405098..410003+

>mRNA_E-siliculosus-1a_M_contig93.17360.1 ID=mRNA_E-siliculosus-1a_M_contig93.17360.1|Name=mRNA_E-siliculosus-1a_M_contig93.17360.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2880bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:405098..410003+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCTGCTATTCCACCTCGCGGGTGCTTTCCTCTTGGTGTCGTTTTGGCA
TTCTGCCGGAGCTTTCCGGACTGGCGCGGCCTTGGCGCAGCGAGGCTGCG
AAAGGACCCGCGGCAAACATGACAGAATCTGCCGTGAAATCGAACCTTGT
TCTGCAGGGCGGCGATCGCTCAGTGCTTGCGTGTCTAAAGGGGGGTGGTG
CGCTTCGCCTCAGGATAGCACCAGCGGCCCCAGGGAAGCTCTTGCAGCCG
CAAGCAGGGCTGCTGTTTCAACCATGGCTGGTAGCAGTACCGAGGCTGTT
GGGAGATGCGGTGCAACTGCTCTGTCACTGACTCGAAATCAGCTGCTTTC
CTCGATGGCGGCCGCGGCCGCGGGGTTCCTGTGGGCACCATGGCAAGCCT
CAGCAGCAGCAGATGTGGAGACAACGTTGGTATCGGAAGCAGCGAGCACC
GGGCCTGTGGCAGCGCAGGGGGAGGTCGGTGGGGGTGTGGAAGAGGTGGC
GGCGGCGAAGTACGTGGTGCAATCTGACGAGATGCTGCTATTCCACCTCG
CGGGTGCTTTCCTCTTGGTGTCGTTTTGGCATTCTGCCGGAGCTTTCCGG
ACTGGCGCGGCCTTGGCGCAGCGAGGCTGCGAAAGGACCCGCGGCAAACA
TGACAGAATCTGCCGTGAAATCGAACCTTGTTCTGCAGGGCGGCGATCGC
TCAGTGCTTGCGTGTCTAAAGGGGGGTGGTGCGCTTCGCCTCAGGATAGC
ACCAGCGGCCCCAGGGAAGCTCTTGCAGCCGCAAGCAGGGCTGCTGTTTC
AACCATGGCTGGTAGCAGTACCGAGGCTGTTGGGAGATGCGGTGCAACTG
CTCTGTCACTGACTCGAAATCAGCTGCTTTCCTCGATGGCGGCCGCGGCC
GCGGGGTTCCTGTGGGCACCATGGCAAGCCTCAGCAGCAGCAGATGTGGA
GACAACGTTGGTATCGGAAGCAGCGAGCACCGGGCCTGTGGCAGCGCAGG
GGGAGGTCGGTGGGGGTGTGGAAGAGGTGGCGGCGGCGAAGTACGTGGTG
CAATCTGACGAGGTCGGCGTGCTCTTTGGAGACGGGCCCATCGGTATCAA
GCTCGGAGACAACCCTCTCAAGGCTTCTGGGGTTTGCAGGGTCTACGTTA
CGGAGGTCGGCGTGCTCTTTGGAGACGGGCCCATCGGTATCAAGCTCGGA
GACAACCCTCTCAAGGCTTCTGGGGTTTGCAGGGTCTACGTTACGGAGGT
ACTAACGGGATCGCAAGCGATACGCCAGGCAAACCTCCGGGCAGGGTTCG
GGGTGGCCGCAGTGGGGGGCAAGCCTGCGGAAAGGCTTGAGCCGAAGGAG
GTGGCGGAGCTCATCCGGTTGTCGCCTCGGCCCATGGAGATCGTCTTCAG
GTACTAACGGGATCGCAAGCGATACGCCAGGCAAACCTCCGGGCAGGGTT
CGGGGTGGCCGCAGTGGGGGGCAAGCCTGCGGAAAGGCTTGAGCCGAAGG
AGGTGGCGGAGCTCATCCGGTTGTCGCCTCGGCCCATGGAGATCGTCTTC
AGGGACCCCGAGTTGCTTGGTCGACGACTGCAAGCCGAGGGACCCCGAGT
TGCTTGGTCGACGACTGCAAGCCGAGGCAGACAGGAAAGCGGAGGCCGTG
AAGCGGAGCAAGCAAAAGGCGGCCGCCGACGCGGCATCTCCGGAGGCGGC
GGCTCCGGACACGGGAGATTCAGCAACAGCGACGGCCGTTGACCCTCGCA
GCGGCAGCGTCGGCAACGGCGGCGGCAGCGCATCCTCGGGGGAGCTGAGG
GTGACGCAGGTGGGCAAGAAGCCGGCGGTGTGCGGCACGAGGACTAAGGC
GGGCGACTTGATCGAGTTCAGGCAGACAGGAAAGCGGAGGCCGTGAAGCG
GAGCAAGCAAAAGGCGGCCGCCGACGCGGCATCTCCGGAGGCGGCGGCTC
CGGACACGGGAGATTCAGCAACAGCGACGGCCGTTGACCCTCGCAGCGGC
AGCGTCGGCAACGGCGGCGGCAGCGCATCCTCGGGGGAGCTGAGGGTGAC
GCAGGTGGGCAAGAAGCCGGCGGTGTGCGGCACGAGGACTAAGGCGGGCG
ACTTGATCGAGTTCAGGTACTCTGCACGGTTGGCGAGCGATCTGTCGGTG
GAGTTTGATTCCAGCGACCGCAGGGGGACGGGGCTTCCATATGCGATCGT
CCTGGGGAACGGCGATGTACTCTGCACGGTTGGCGAGCGATCTGTCGGTG
GAGTTTGATTCCAGCGACCGCAGGGGGACGGGGCTTCCATATGCGATCGT
CCTGGGGAACGGCGATGTGGTAAAAGGGTTGGATTTGTCACTGTTCGACA
TGTGCGTCGGCGAGCGGAGAAAGATAGAGATTCCTGCCCGCCTGGCTTAC
GGGAGGAAGGGGAGCAAGGCCTTCGGAGTGCCTCCGGATGACGGAACGGT
GGTAAAAGGGTTGGATTTGTCACTGTTCGACATGTGCGTCGGCGAGCGGA
GAAAGATAGAGATTCCTGCCCGCCTGGCTTACGGGAGGAAGGGGAGCAAG
GCCTTCGGAGTGCCTCCGGATGACGGAACGGGCTCCGCCGACGTGGTGTT
CGGAGTCGAGCTCGTGAGCATCAACTTCTCGATCAACGCGTCGGACGCGA
GGGACAACTTCTACACGGACGATCCTTGCGACGCGGCCGCCGTCGCCGCC
GGAAACGCCAGCGGGCAGTGCAAGAAATGAGGCTCCGCCGACGTGGTGTT
CGGAGTCGAGCTCGTGAGCATCAACTTCTCGATCAACGCGTCGGACGCGA
GGGACAACTTCTACACGGACGATCCTTGCGACGCGGCCGCCGTCGCCGCC
GGAAACGCCAGCGGGCAGTGCAAGAAATGA