mRNA_E-siliculosus-1a_M_contig93.17353.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: Q8QN79_ESV1K (EsV-1-211 n=2 Tax=root TaxID=1 RepID=Q8QN79_ESV1K) HSP 1 Score: 103 bits (257), Expect = 5.180e-24 Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*F 261
EIEQRC RL+STEEGRA QSF+ DQGP KKQR P WFEY T EEK+ Y S EA + LAKK + L EID+ K C+ EL+SV F
Sbjct: 262 EIEQRCARLRSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLGEIDVFKTCKEELKSVGQF 348
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: A0A6H5K200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K200_9PHAE) HSP 1 Score: 100 bits (248), Expect = 9.340e-23 Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*F 261
EIEQRC RLQSTEEGRA QSF+ DQGP KKQR P WFEY T EEK+ Y S EA + LAKK + L ++D+ + C+ +L SV F
Sbjct: 262 EIEQRCARLQSTEEGRAYQSFVTDQGPAKKQRAAMPAWFEYATAEEKRAYISIEATTSIVLAKKALVLRDVDVFETCKEKLNSVGQF 348
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 2.400e-20 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*F 261
EIEQRC RLQSTEEGRA QSF+ DQGP KKQR P FEY T EEK+ Y S EA LAKK + L ID+ + C+ +L+SV F
Sbjct: 262 EIEQRCARLQSTEEGRAYQSFMTDQGPAKKQRAAMPARFEYATAEEKRAYISIEATTSKVLAKKALVLRYIDVFETCKEKLKSVGQF 348
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: A0A6H5JDQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ1_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 5.050e-17 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYA 153
EIEQRC+RLQSTEEGRA Q FLLDQGP KKQR + PFWFEY +DEEK+ ++
Sbjct: 173 EIEQRCDRLQSTEEGRAYQGFLLDQGPAKKQRSEEPFWFEYASDEEKRAFS 223
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: A0A6H5JC19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC19_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 1.480e-12 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 49 ACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*FS 264
A Q+F+LDQ P KKQR +APFWF + + E+K++Y S +A K M L ++D+CK + ELQSVN F+
Sbjct: 156 AYQNFVLDQSPAKKQRSEAPFWFNFASGEQKRDYVSV-------MANKAMTLEQMDLCKTLKDELQSVNQFT 220
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 8.160e-12 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*FS 264
EIEQRC RLQ TEEGRA QSF+ + P KK P WFEY T+++K Y + E KK++ + EI++ ++C+ L+SV F+
Sbjct: 433 EIEQRCARLQVTEEGRAYQSFMTGEAPPKK-HTSLPEWFEYATNDQKSAYVTAEV-------KKSVVVTEIEMHEVCKVGLESVGQFA 512
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: Q8QN80_ESV1K (EsV-1-210 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN80_ESV1K) HSP 1 Score: 67.0 bits (162), Expect = 5.060e-11 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*FS 264
EIEQRC RLQ+TEEGRA QS + + P KK + P WFEY T ++K Y + + KK++ + EI++ +IC+ L+SV F+
Sbjct: 277 EIEQRCARLQNTEEGRAYQSVMTGEAPPKKHK-SLPEWFEYATSDQKSAYVAAKV-------KKSVVVTEIEMHEICKVGLESVGQFA 356
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Match: D8LPL9_ECTSI (EsV-1-210 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL9_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 6.910e-11 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYASTEARNYMTLAKKTMALNEIDICKICRGELQSVN*FS 264
EIEQRC RLQ+TE+GRA QS + Q P KK + P WFEY T ++K Y + + KK++ + E+++ ++C+ L+SV F+
Sbjct: 277 EIEQRCARLQNTEDGRAYQSVMTGQAPTKKHK-SLPEWFEYATSDQKSAYVAAKV-------KKSVVVTELEMHEVCKVGLESVGQFA 356 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17353.1 >prot_E-siliculosus-1a_M_contig93.17353.1 ID=prot_E-siliculosus-1a_M_contig93.17353.1|Name=mRNA_E-siliculosus-1a_M_contig93.17353.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=86bp EIEQRCNRLQSTEEGRACQSFLLDQGPVKKQRPDAPFWFEYVTDEEKKEYback to top mRNA from alignment at E-siliculosus-1a_M_contig93:347671..347934+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17353.1 ID=mRNA_E-siliculosus-1a_M_contig93.17353.1|Name=mRNA_E-siliculosus-1a_M_contig93.17353.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=264bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:347671..347934+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:347671..347934+ >mRNA_E-siliculosus-1a_M_contig93.17353.1 ID=mRNA_E-siliculosus-1a_M_contig93.17353.1|Name=mRNA_E-siliculosus-1a_M_contig93.17353.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=516bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:347671..347934+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |