mRNA_E-siliculosus-1a_M_contig93.17351.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A6H5KTV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV1_9PHAE) HSP 1 Score: 201 bits (510), Expect = 3.560e-63 Identity = 104/113 (92.04%), Postives = 109/113 (96.46%), Query Frame = 1 Query: 13 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 AQG+N+ASSKMKEAKGQ+AYDSFEIAART+LF PTFTVLAPEDAASVSSVHAL GPVLSLLEGCE+ARSVGKANEALTRIGMGLAANPS T SEMLLYVHATVAPFLLPQTSE Sbjct: 14 AQGSNIASSKMKEAKGQRAYDSFEIAARTLLFWPTFTVLAPEDAASVSSVHALAGPVLSLLEGCEDARSVGKANEALTRIGMGLAANPSATRSEMLLYVHATVAPFLLPQTSE 126
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI) HSP 1 Score: 213 bits (542), Expect = 7.490e-61 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 1 Query: 13 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAAS SSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE Sbjct: 2440 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASASSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 2552
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE) HSP 1 Score: 208 bits (529), Expect = 4.180e-59 Identity = 109/113 (96.46%), Postives = 112/113 (99.12%), Query Frame = 1 Query: 13 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 AQGANVASSKMKEAKGQKAYDSFEIAART+LFRPTFTVLAPE+AASVSSVHALVGPVL+LLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQT E Sbjct: 2586 AQGANVASSKMKEAKGQKAYDSFEIAARTLLFRPTFTVLAPENAASVSSVHALVGPVLALLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTLE 2698
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: D8LFK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK0_ECTSI) HSP 1 Score: 202 bits (515), Expect = 2.910e-57 Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 1 Query: 13 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 AQGANVASSKMKEAKGQKA DSFEIAART+LFRPTFTVLAPEDAASVSSVHA VGPVLSLLEGCENARSVGKANEALTRI +GLAANPSVTESEMLLYVHATVAPFLLPQTSE Sbjct: 52 AQGANVASSKMKEAKGQKASDSFEIAARTLLFRPTFTVLAPEDAASVSSVHAPVGPVLSLLEGCENARSVGKANEALTRIEVGLAANPSVTESEMLLYVHATVAPFLLPQTSE 164
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: D7G498_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G498_ECTSI) HSP 1 Score: 194 bits (494), Expect = 6.020e-56 Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 1 Query: 13 AQGANVASSKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 AQGA +ASSK+KEAKGQKAYDSFE AART+LFRPTFTVLAPEDAA VSSVHALVGPVLSLLE CENARSVG+ANEALTRI MGLAA+PSVTESEMLLYVHATVAPFLLPQTSE Sbjct: 84 AQGAKIASSKIKEAKGQKAYDSFENAARTLLFRPTFTVLAPEDAALVSSVHALVGPVLSLLEECENARSVGEANEALTRIEMGLAADPSVTESEMLLYVHATVAPFLLPQTSE 196
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A6H5KUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI4_9PHAE) HSP 1 Score: 184 bits (468), Expect = 2.230e-53 Identity = 97/103 (94.17%), Postives = 98/103 (95.15%), Query Frame = 1 Query: 43 MKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 MKEAKGQ AYDSFEIAART+LFRPTFTVLAPEDAA VSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPS T SEMLLYV ATVAPFLLPQTSE Sbjct: 1 MKEAKGQMAYDSFEIAARTLLFRPTFTVLAPEDAALVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSATRSEMLLYVPATVAPFLLPQTSE 103
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A6H5K313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K313_9PHAE) HSP 1 Score: 183 bits (465), Expect = 5.480e-51 Identity = 94/103 (91.26%), Postives = 97/103 (94.17%), Query Frame = 1 Query: 43 MKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQTSE 351 +KEAKGQKAYDSFEI ART+LFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARS GKANEAL RIGMGLA NPS T SEMLLYVHATVAPFLLPQTS+ Sbjct: 25 LKEAKGQKAYDSFEITARTLLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSEGKANEALARIGMGLAVNPSATRSEMLLYVHATVAPFLLPQTSD 127
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A6H5K1M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M7_9PHAE) HSP 1 Score: 152 bits (384), Expect = 3.190e-41 Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 43 MKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESE 294 MKEAKGQKAYDSFEIAART+LFRPTFTVLAPEDA SVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPS T E Sbjct: 1 MKEAKGQKAYDSFEIAARTLLFRPTFTVLAPEDADSVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSATSRE 84
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A7S3HJY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJY3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.000e-18 Identity = 48/103 (46.60%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 37 SKMKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLLEGCE----NARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFL 333 S ++EAKG KA D+ E+ AR +LFRPT+ +LA ED AS+SS+HAL P+L+ L+ + N +G+ EAL R+ +GL+ N S+ E+LLY+H+T+ PF+ Sbjct: 1398 SLIREAKGSKANDTLELTARCLLFRPTYALLALEDPASLSSIHALTVPLLNSLQQQQLDKPNGGLMGRIAEALQRVALGLSKNSSLEAKELLLYLHSTLQPFV 1500
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Match: A0A835YZH5_9STRA (DRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.980e-17 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 88 AARTMLFRPTFTVLAPEDA--ASVSSVHALVGPVLSLLEGCENARSVGKANEALTRIGMGLAANPSVTESEMLLYVHATVAPFLLPQ 342 AAR +LFRP++T +AP A + VS VHA+V P+L + E+ +S K AL R+ +GL ANPSVT E+LLYVHATV+PFLLP+ Sbjct: 2401 AARLLLFRPSYTAIAPAGALPSDVSGVHAVVAPLLLHVNASESRKSANKVGIALERVVLGLTANPSVTAHELLLYVHATVSPFLLPR 2487 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 15 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17351.1 >prot_E-siliculosus-1a_M_contig93.17351.1 ID=prot_E-siliculosus-1a_M_contig93.17351.1|Name=mRNA_E-siliculosus-1a_M_contig93.17351.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=154bp MKEAKGQKAYDSFEIAARTMLFRPTFTVLAPEDAASVSSVHALVGPVLSLback to top mRNA from alignment at E-siliculosus-1a_M_contig93:337226..338484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17351.1 ID=mRNA_E-siliculosus-1a_M_contig93.17351.1|Name=mRNA_E-siliculosus-1a_M_contig93.17351.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1259bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:337226..338484+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:337226..338484+ >mRNA_E-siliculosus-1a_M_contig93.17351.1 ID=mRNA_E-siliculosus-1a_M_contig93.17351.1|Name=mRNA_E-siliculosus-1a_M_contig93.17351.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=924bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:337226..338484+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |