Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 144 |
| Model size | 145 |
| Exons | 2 |
| Hectar predicted targeting category | no signal peptide or anchor |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936470.919039-CDS-E-siliculosus-1a_M_contig93:316169..316248 | 1622936470.919039-CDS-E-siliculosus-1a_M_contig93:316169..316248 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 316170..316248 - |
| 1696251093.780634-CDS-E-siliculosus-1a_M_contig93:316169..316248 | 1696251093.780634-CDS-E-siliculosus-1a_M_contig93:316169..316248 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 316170..316248 - |
| 1622936470.9357119-CDS-E-siliculosus-1a_M_contig93:316968..317033 | 1622936470.9357119-CDS-E-siliculosus-1a_M_contig93:316968..317033 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 316969..317033 - |
| 1696251093.796513-CDS-E-siliculosus-1a_M_contig93:316968..317033 | 1696251093.796513-CDS-E-siliculosus-1a_M_contig93:316968..317033 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 316969..317033 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17346.1 >prot_E-siliculosus-1a_M_contig93.17346.1 ID=prot_E-siliculosus-1a_M_contig93.17346.1|Name=mRNA_E-siliculosus-1a_M_contig93.17346.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=48bp
GCGLGETPPRVSTGVRRFDGCRKEGKATMLVLPLLTQDGSRGIAGLQL back to topmRNA from alignment at E-siliculosus-1a_M_contig93:316170..317033- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig93.17346.1 ID=mRNA_E-siliculosus-1a_M_contig93.17346.1|Name=mRNA_E-siliculosus-1a_M_contig93.17346.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=864bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:316170..317033- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGTTGCGGCCTTGGAGAAACGCCTCCAAGAGTCTCGACGGGGGTTCGGCG
GTTCGACGGATGCCGGTGAGTTTGGTTTCGCTTCTTGGCCGCGACCCCGG
GTGGGAGATCCAAGTGCGTGCACGGCACAGCGCAGCAGCCGGCAGTGCCA
AGTGATCCTCCGTCTCCCTGTGCTCACATTGTCTGGGCCTTTCGCGATTT
TGTTCGTTCAACCCGGAAATCTAACATGTTCTCTACATTTGTTTTTGAAA
TTTCTCTCCTAGACTTCTAGTTGGTTTGAGGCCATGGCGTAGGACGTACA
ACGTTGGCACGCGAGGCAGACGTTTTTGCTCAGCTTGGCCTTCCGTTGGT
CTCGTATTCCGTGTGTTCGGACGGCGTATCCACAATCTGCTTGACATCTG
CTGGCGTAAATGTTTGACCAACGTCGAGGTTTCGTTTATAACCGCAAGAG
AGCACGGTCAGGCTTTTTCACGAGAGCGTCCGCGTCGCTTGCAATCTAGC
ATCTGTTGCGACGTCTAGGTCGACGCCGTACCATGAGTCATGGTGCTGAT
ACATCGCTTGTGCGTCGTTTGCAATTGCGTCTACTCTCCGCCGTTTATGC
AGCTAGCCTGGAGGCACGAGTCGCTGAACTTGAAAAATGGAAACAAGGTG
ATTTGTAGATAGTTTTGAACGCGGCAGTTGCACTTTTGGCATAAGCGCGG
TCAGCGAAGCCTCACACCCGACGACACGATTAGCCCCGAGAATAATCTTT
AAGTGGTTTTGCGCTCGAATGCTCGCCATATGCAGGAAAGAAGGGAAAGC
TACGATGCTTGTTCTGCCTCTGCTGACTCAGGATGGTAGCCGCGGAATCG
CTGGACTACAGTTG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:316170..317033- >mRNA_E-siliculosus-1a_M_contig93.17346.1 ID=mRNA_E-siliculosus-1a_M_contig93.17346.1|Name=mRNA_E-siliculosus-1a_M_contig93.17346.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=288bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:316170..317033- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGTTGCGGCCTTGGAGAAACGCCTCCAAGAGTCTCGACGGGGGTTCGGCG
GTTCGACGGATGCCGGGTTGCGGCCTTGGAGAAACGCCTCCAAGAGTCTC
GACGGGGGTTCGGCGGTTCGACGGATGCCGGAAAGAAGGGAAAGCTACGA
TGCTTGTTCTGCCTCTGCTGACTCAGGATGGTAGCCGCGGAATCGCTGGA
CTACAGTTGGAAAGAAGGGAAAGCTACGATGCTTGTTCTGCCTCTGCTGA
CTCAGGATGGTAGCCGCGGAATCGCTGGACTACAGTTG back to top
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