mRNA_E-siliculosus-1a_M_contig93.17345.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17345.1 vs. uniprot
Match: A0A6H5KX60_9PHAE (MAGE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX60_9PHAE) HSP 1 Score: 554 bits (1427), Expect = 5.800e-192 Identity = 335/358 (93.58%), Postives = 342/358 (95.53%), Query Frame = 1
Query: 208 PRRLKQSRSSEDGXXXXXXXXXXXXSXXXSXXXXXXXXXXXXXXXXXXXFVNISTQXXXXXXXXXXXXXX--RFTFSESQTSARSNMVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKYIVTKADEKLQQGMGFKVKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSVIFCSSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVHIDGLGDVHEHLVMFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEEQESQGLSQMATQEH 1275
PRRLKQSRSSEDG XXXXXXXXXXX XX XXXXXXXXXXXXXXX FVNISTQ XXXXXXXXXXXX RF FSESQTSARS MVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLK+I+TKADEKLQQGMGFKVKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSVIFCSSDKSVAENQLFKKLHDHVD+RVPEKAWNG+NPKNKVRVH+DGLGDVHEHL MF KQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQS+DPSDLLGLEEQESQGLSQMATQ+H
Sbjct: 59 PRRLKQSRSSEDGSXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXSSG-FVNISTQGNXXXXXXXXXXXXXXRFAFSESQTSARSQMVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILTKADEKLQQGMGFKVKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSVIFCSSDKSVAENQLFKKLHDHVDERVPEKAWNGSNPKNKVRVHVDGLGDVHEHLAMFTKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSIDPSDLLGLEEQESQGLSQMATQDH 415
BLAST of mRNA_E-siliculosus-1a_M_contig93.17345.1 vs. uniprot
Match: D8LSU2_ECTSI (MAGE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU2_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 1.310e-183 Identity = 263/272 (96.69%), Postives = 270/272 (99.26%), Query Frame = 1
Query: 460 MVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKYIVTKADEKLQQGMGFKVKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSVIFCSSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVHIDGLGDVHEHLVMFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEEQESQGLSQMATQEH 1275
MVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDL+KKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLK+I+ KADEKLQQGMGFK+KTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLS++FCSSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVH+DGLGDVHEHL MFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEEQESQGLSQMATQEH
Sbjct: 1 MVKSAKTPSKEVQIEEKDQKKGNELSDLAKKDLVKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILNKADEKLQQGMGFKIKTPLPDKPWFVKDTFYVVNVLNNEQHFKEVLRGKGQAGRGLLVLVLSIVFCSSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVHVDGLGDVHEHLAMFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEEQESQGLSQMATQEH 272
BLAST of mRNA_E-siliculosus-1a_M_contig93.17345.1 vs. uniprot
Match: A0A835ZPS1_9STRA (Protein-L-isoaspartate O-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPS1_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.920e-25 Identity = 85/235 (36.17%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 556 LIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKYIVTKADEKLQQGMGFKVK-TPLP-----DKPWFVKDTFYVVNVLNNEQHFKEVLRGKG--QAGRGLLVLVLSVIFCSSDKSVAENQLFKKLH---DHVDKRVPEKAWNGNNPKNKVRVHIDGLGDVHEHLVMFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGL 1227
L+++M RFLL+KG+ EP+ R + + +V+G +++ V +++ +A E L++ G++V TP KPW+ K+TFYVVN L H K + R A G L++ L VI+C KSV E L LH D + K P+ G + + V G+G E L F QHYLL+ K GG E+I YSMGPR+ LEIG QL++ + + +D S L L
Sbjct: 127 LVRRMARFLLLKGVRREPVPRGKCVADVMGA-HKRTKVTAFVLREASELLERTFGYRVAMTPQAFDDARRKPWYSKETFYVVNALARADHQKLLGRAPSCDAALLGFLMVTLGVIYCQQSKSVTEPALRAALHAFDDRIAKTAPDAGARGASGNDLV----PGVGPFREALRTFVSQHYLLET---KEEVGGGGETITEYSMGPRAYLEIGRPQLIKFLYETRQLPLDRSLLAEL 353
BLAST of mRNA_E-siliculosus-1a_M_contig93.17345.1 vs. uniprot
Match: A0A1E7FAE6_9STRA (MAGE domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAE6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.570e-8 Identity = 68/248 (27.42%), Postives = 114/248 (45.97%), Query Frame = 1
Query: 574 RFLLMKGLNHEPLTRKEVMDN--VLGEKYRKAGVLKYIVTKADEKLQQGMGFKV-KTPL-----PDKPWFVKDTFYVVNVLNNEQ--HFKEVLRGKGQAG---RGLLVLVLSVIFC------SSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVHI------DGLG-DVHEHLVMFAKQHYLLKKMV--DKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEE 1233
R +L +GL EP+ R +V + + G K + +A +L+ GF++ K P P KD +Y+ N + + Q H + Q+ +G ++LV +IFC +S + + E L++ LH VD +PE+ + + K R +GL +V L Y +K+ D ++ E YS+GPRS +EIG RQ++ A ++G++ DPS L +EE
Sbjct: 73 RLILFRGLEKEPIDRLKVTKDAGIAG----KDNIGSAAFQEASRRLRNVFGFELNKIPKYMENQKGMPPRFKDRYYLQNDIGDTQQGHHSRAIHSVHQSSCIEKGFILLVNGLIFCKGESKSNSTRKILERDLYRYLH-RVDDAIPEEPPVHGSTRFKARSQYCRGTQGEGLTPNVDTLLEQGVNWDYFIKEKATEDNCSSQNLDEGDILYSIGPRSAIEIGRRQIIVFCASILGEAPDPSMLREIEE 315
BLAST of mRNA_E-siliculosus-1a_M_contig93.17345.1 vs. uniprot
Match: A0A448ZKL6_9STRA (MAGE domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKL6_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.620e-5 Identity = 64/271 (23.62%), Postives = 113/271 (41.70%), Query Frame = 1
Query: 481 PSKEVQIEEKDQKKGNELSDL-AKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKYIVTKADEKLQQGMGF------KVKTPLPDKPWFVKDTFYVVNVLNNEQ---HFKEV--LRGKGQAGRGLLVLVLSVIFCSSD------KSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRVHIDGLGDVHEH-------LVMFAKQHYLLKKMVDKPTA--DGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPS 1212
PS+ V E ++K + D A++ + + R +L + EP+ R +++ + + G + +A ++L+ GF K + P KD YV+N ++ H +++ + RG ++LV +IFC + + + E L+K LH VD +PE+ + K R H L A Y +K+ + E YSMGPRS +EIG +Q++ A ++G+ D S
Sbjct: 45 PSQSVLPERPGERKNIDKMDREAQEKSLSAVSRMILFRAFEREPIDRLKIIKDAGISGSDRIGSAAF--NEASQRLRNVFGFELNRIPKYMENMKGLPAKFKDRHYVLNGAVDDDRGTHSRQIHGVHEGSMIERGFIMLVNGLIFCKGESKGNSMRKILERDLYKYLH-RVDDAIPEEPPAQGTSRAKARTQYRSGARTETHTPNADALLEQCAHWDYFVKEKATEENCPFQNLEEGDVLYSMGPRSAMEIGRKQIIAFCASILGEEPDLS 312 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17345.1 >prot_E-siliculosus-1a_M_contig93.17345.1 ID=prot_E-siliculosus-1a_M_contig93.17345.1|Name=mRNA_E-siliculosus-1a_M_contig93.17345.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=413bp MARPTATESRRRRSQESDDNLQPPVRRSRKRNAVPEEEDSKEGLVQEEGGback to top mRNA from alignment at E-siliculosus-1a_M_contig93:285514..294741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17345.1 ID=mRNA_E-siliculosus-1a_M_contig93.17345.1|Name=mRNA_E-siliculosus-1a_M_contig93.17345.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9228bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:285514..294741+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:285514..294741+ >mRNA_E-siliculosus-1a_M_contig93.17345.1 ID=mRNA_E-siliculosus-1a_M_contig93.17345.1|Name=mRNA_E-siliculosus-1a_M_contig93.17345.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2478bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:285514..294741+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |