Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 303 |
| Model size | 604 |
| Exons | 2 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936470.8431628-UTR-E-siliculosus-1a_M_contig93:232048..232347 | 1622936470.8431628-UTR-E-siliculosus-1a_M_contig93:232048..232347 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig93 232049..232347 - |
| 1696251093.7377648-UTR-E-siliculosus-1a_M_contig93:232048..232347 | 1696251093.7377648-UTR-E-siliculosus-1a_M_contig93:232048..232347 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig93 232049..232347 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936470.8676214-CDS-E-siliculosus-1a_M_contig93:232347..232452 | 1622936470.8676214-CDS-E-siliculosus-1a_M_contig93:232347..232452 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 232348..232452 - |
| 1696251093.7490783-CDS-E-siliculosus-1a_M_contig93:232347..232452 | 1696251093.7490783-CDS-E-siliculosus-1a_M_contig93:232347..232452 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 232348..232452 - |
| 1622936470.8821301-CDS-E-siliculosus-1a_M_contig93:238412..238610 | 1622936470.8821301-CDS-E-siliculosus-1a_M_contig93:238412..238610 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 238413..238610 - |
| 1696251093.760444-CDS-E-siliculosus-1a_M_contig93:238412..238610 | 1696251093.760444-CDS-E-siliculosus-1a_M_contig93:238412..238610 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 238413..238610 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17343.1 >prot_E-siliculosus-1a_M_contig93.17343.1 ID=prot_E-siliculosus-1a_M_contig93.17343.1|Name=mRNA_E-siliculosus-1a_M_contig93.17343.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=101bp
LSGVVHFSTIFYHSSAVFSNPLPQLFFRFSTRRTYLCSPCPVPARCVRPD
QRDWNKTSHQRGHRYQAPGRIYRQRSRTASEHHTTHRPATDKHDDTNDRV
* back to topmRNA from alignment at E-siliculosus-1a_M_contig93:232049..238610- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig93.17343.1 ID=mRNA_E-siliculosus-1a_M_contig93.17343.1|Name=mRNA_E-siliculosus-1a_M_contig93.17343.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6562bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:232049..238610- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTTTCGGGTGTGGTTCACTTCTCAACGATTTTCTATCATAGTAGTGCCGT
GTTCAGCAACCCTTTGCCCCAGCTCTTTTTCCGATTTTCCACGAGGAGGA
CGTACCTCTGCTCTCCCTGTCCTGTTCCTGCCAGGTGTGTACGACCGGAT
CAACGAGACTGGAACAAGACATCTCACCAGCGCGGACACCGATATCAGGC
AAGGGCTAGACCATACACATATCGATGGTTTGATCCATGGCGTTTTTACC
CGGTGTTGACGAGAGTTTTCGATCGGGGTGGGTGTTTTCCGTAGTTTTCG
CCATTTGGGAGCCTCAGTGGTCCGAGACTGCTACAGTAGTGTACAACAAC
TTCGTCCCGTCTGGTAGGAATGGGAGTGAAATATTGTGTTTTAGTAGTAG
AGACTCGTTAGGATACCGGCGAGGCGTTTCGCTGCGCGGAACGTGTGGTA
CGGGGGATTTCTCCCTGTGTGGGCCCCATAAAATGATGTTAAAGGGAATT
CTCAAGCAAAACCAACAATATAACGTTGTTGTCGAAGACCAAATACACTG
GCGTTTGTTGTGAACGGAAGAATTCGGAACATCTCCTAGATCTACGAACG
TGTTTGGGTTCTTGTTGCGCTGCCCTGGAGGCGTGTAGGTTCGGATGCGT
TGGTTCGGGTTTTCTGTAGTCCCTCGAAGAGAACGGCCTCAAAGGCGCTC
TCATTCTGCTGCCTCGCTGCTCCGGCAGCGAGAGTTTGAGAGACGCGTGT
CCATTGAACTCAAGGGCAACTGGTTGAGGAAAACCCAGCGGATAGCACGC
AGCCCGGTTTGGAGGGTCACACGGAGGTCAGCAGGTAGCTACGTCGAAGT
TCGGACCACAGCCAGCAAACAATGCCTGACAGTTTTTCTCCCGCCCACCC
ACCCCTTTTCTTTCGAAGACGGGGAGGCTCCAGAGTATTACAGTCTCGCT
ACGTAGTTCCTCGAGCGGACGCTCTAGCCAAGCGTGCTCCATCATCATCA
GGCCCTCGTCTCTCAGCCCAGTTAGGAACTGTATTGATTGTAATGCGTGC
GAATTTGCGTCGTTGTAATTATGATAATTGATAAAAATAGGTTGGAAGTG
TTTGCCATTGGCTCTACTGTAGGGTTATCTTATATTTGCCAAGACATTGT
AATGACGACTGATTGGTTGCCAAATAGTTTTTTTCGGTATTCTACACTTT
TTGTATTTGAAACAAATACTACAATATACGATACGCCTAGAAACAAGCAT
TTCGCTTACCATATCGGGGGGGTGTAGTGGACCCGCACGCACCCACCGGC
TTCATTCAGCGGATTTGATTAACACCAACTCGCTCATCGAACAGCTGGCA
ATCCACCACTCGCTCTTGTTGTTCTTCTGATAGCATCGTAGTCGTTGTTG
TGGGCCTGGCCTGTTCAAATCGGGCAAACTAGAAACGCTTTCCCTTACAA
CCACATGTACTGGCTTGGCGACGGAATTTCATGTGAATCCAACTTGGGGA
TGTCGACCGTAAGAACCAGCAGTCCGGTGCTGTGTGGCGTTTCGCGACAA
TCAAGGTTCGGCAGCAAGCAGTCGCTTTCACGCTGAAAGACTGTCGATAC
ATTTGTGAATCGTAACAACGTCGCTCAATCTGGATTGGTTGTTTAGGTGT
TTCTGTAACGTAGCGAAACGGCATTTCATCCCTCAATTGTGCGGGGCATA
CTCTGCATGTATCTCTGAGTGTATACCAGTCCTTGTGCATACGAGTATGT
CGCAATTCCAGCTCCGAAGAAGCATGAAGTGGTCGGCTACTGTTTGTGGA
GATGGAAAGATGGCAGGACCTCCTCTCAGGGATGAGTATTCGGTTTCTAT
GTGGGGTGTTGTGGAATGGTGTGTACCATTTGGGGCCTTGGTCAGTTTCG
GGACTCCTACGTTTGCAGTCGTAGTCCCCCGACCGGTATTATTTGCGGGG
AGAGGGACGGGTTTGTAGGAGTCAACGCCGCGCCTCGTGGTCAACGTGGC
TAGACAAGACGATGTGTGTTCCGTATGTCTCTCTCCCCAGCGTGTGGCCT
AGAAACCGAAGAATATTACTCATATGAAGCAGTGCGAAAGATAACAACAA
TAAACAGGCCCTCGTTTCTCAGCCCAGTTAGGACTACTATTGCTTGTGCA
TGCGTGCGAAGTTGCGTCGCTATCACTATGACCAATGGATGGAATTTGGT
TGGAAGTGCTTTTTGCCGTTGGCTCTAGCGTTCTTTTTCTTTTCTCAAGG
GGTCTGATTGGTTGGCTAGCTTGTACTTCGCACAAGTTGTTTTTGGTATT
TCTTGTAGAATGCCCATATGCATACAATATTTTTCAATCTGAAAACGTAC
ACCAATCAAAGGCGCGCCTACAAGCATTTGCCTTACTCTATCAAGGGGGT
GTAGTGGACCAGCACACACCCACCGGCTTCATTCATCGGATTTGATTGTA
GCACCAACTCGCTCATCGAACAGCTGGCAATCCACCACTCGCTCTTGTTG
TTCTTCTGATAGCATCGTAGTCGTTGTTGTGGGCCTGGCCTGTTCAAATC
GGGCAAACTAGAAACGCTTTCCCTTACAACCACATGCACTGGCTTGGCGA
CGGAATTTCATGTGAATCCAACTTGGGGATGTCGACCGTAAGAACCAGCA
GTCCGATGCTACGCGGCGTTTCGCGACCATCAAGGTTCGGCAGCAAGCAG
TCGCTTTCACGCTGAAAGACTGTCGATACTTTTGTGAATCGTAACAACGT
CGCTCAATCTGGATTGGTTGTTTAGGTGTTTCTGTAACGTAGCGAAACGG
CATTTCATCCCTCAATTGTGCGGGGCATACTCTGCAGTACCTCGGAGCGT
TCACACTCCGTGGTGAGTACCAGTATGTCGCAATTCCAGCTCCGAAGAAG
CATGAAGTGGTCGGCTACTGTTTGTGGAGATGAAAGATGGCAGGACCTCC
TGTCAGTGATATGTTGCAACACGTCCTTGGTTTCCTGTAAAATGAGCATA
GTGTTTACCACAGATATACAGTGTAGGGCGTTTCGTTGAATGTTCAGTTT
TGAGGACGGATTTTGAATCAATTGTTAAAATATCGCTAAATATTTCAACT
CAAAGAGCCATTTCCAACATCGGGCACACGATATGCAGCATGAAATTGGC
TGTTCAAGCTAATACCCTTAGAATACATTTATCTACAGTTGTATATTGTT
TTAGAAGTATTTTTAATAGACTACAGGTTTTAGGGCAAGCAGTCTAGGAA
GGGAAAAAGACAAAAAATTGAAGTATACAGTAATCAATAAGTGTAGAAAC
AACTAACACATATTAGTAGATGTATGAGCACGAAGCACCTACTAGAAGGT
TAACCAAACTTGTTCGATTCATAAGCGTATAGCCCAGGGCGTAGAAGCAT
ATTTCTCTGTGAGATAAATACAATAGATTCTAGTGTGAAGTCCCACGCTT
TTAAATGAACTAAACGTAAACAAACAGGCCTTGTTGATGTCGTTTTGCTC
GATATGGCCCAAACTTCGACGTAGCCAGCTGCTGACCTACTATTCCGGGT
GACCCTCCAAAGCGGGTTGCGTGCTATCCACTGTGCTTTCCTCAACACTT
GCCCTTGGGTCCAGTGGACACGCGGCTATCAAACTCTGGTTGTGGGAGCA
GCGAGGTAGCAAAATGAGAGTGCTTTTGAGGCCATTCTCTTCGAGGGACT
CCAGGAAACCGAACGAAGGCATCCGAACCAACATGTGTCACGGGCGGTAC
AACAAGAACTCAAACACATTCGTAGATCTGGGACATGTTCCGAGTTCTTC
CGTCCACCACAAACGTCAATGTATTCGGTCTTCGACCACACACAAGAAGG
CTGCCAAAATGTATTTAGGTGAGGTTGGATGCACAATGTAGAGGTTTGCC
AGGTGGCGAGATGGGTGTTGAGAAGCGGATCCATGTGCGTCTGGTACCCG
TGGGTGTTAGCGACGCGCATGGCAGAAAACACCTGCGACTAGCCAGGACC
ACTCATACGTTAAGGCGTATACTCCTTTGGAGTGCCATGGTACCGTTTTT
CGTGCATCTGCATGGGACTTCGCTCTCTTGCTTTGAGTCGCCGTCGGTTC
AAGGTTCTTCCACACTCGTTTTCCCCAAGGTGTTGGGAGACACGTTGGCA
GTTCCTGCTTGTACAACAGTGAGGTACCATTGTCCATAACCTAGGTCGGT
TGAACGGATACGATCACCACGTACTCAAAACAAGCGGACTGCACGTTCCA
TCCCGAACGATATCATTCGATGTAGGTAGGAGTTCACGGAGATATATGCA
CATGCCGTATCAATAGGCAGGGGCAGCTATCAAGTATCGTTGGGGCAGTG
AGCAGGCGAGTACTTCGGGAAATTCGTAGTGACAGGATAGGTTGCGACAA
GTCAGGCACTGCTCGGGTGTCGGGTCCGTAACATATCCTCGGTCCTATGA
CGGTTGCATGGGATGTTGCATACCTCCATGTTCAAAACGCGCAAAGACCA
CAGGACAAACCCGAAATCAAATCGTCTCATTGCGTGGTGTCGTTGATTGT
TTGAGCAAACGGCACAACAGGGTATAGGGTATACACCAAGGTCAAAGAGC
GACTCGGACGGGTACATTCCTTCTAGTATCGTGAACGGAGGCTTGCTGAT
TGATCGATGTCCATTTTCACCGTGCCGTGTTGCAAATACCATGGAGTGTG
CGGCTGCGTTTCTCTGGAACTGGACTGTAATATTTTTGGAAATGTGGCCT
AAGCTGATGGGAAACTGAACCCATCGATCGGCAGTTTCCTCCGCAGGAGT
CGCATTCCGGTATCGCCAAGAGACACCGAAATCACAAATCTTACCGCTCC
AACCAGTACTGGCCCCCGACATCCGAGACTTGCTCCATGGTTGAAAGCAG
CGTCGTTGACACGCCAATTGAAACAGAACATGTAGGATACATTCCAGAAT
GGAAATGGGTGGAGATGGAGCGTGTCTCGGATGTCGGTTGCGACGATTTG
TGTGGAAGCGGAAGGTTTGTGGTTTTGTTGTCGTTTTTTGCGGTAGCGAG
AGGTGACTCCTGCAGAGAAAACGGTCGACGGATGGGTCGCGGTTCCCGCA
GGTCAGCGTACGTTTTCGAACAACCAGTGCACAGTTCCACAGCAAAGTAG
CCGCGGGAGGGCTTACCTCAGGGTTTTCGTGACAAGCCAGGGTGGAGGTG
GGCATCGATCGGTCAGGTAGGCTCATTTGACGGTGCCCAAAGGCATGTAC
CCGGCTCAGTCGCTCTTCGGACGATTCGGGGTGTACCCCGTTGCGTCGTC
ATGTACCGTCGACTGTCTCGGTGTCGAATAGTCCGGCTCTTGTGTTGTCT
AGATGAAGCTGGGTTGCCCTTTCCGGATGGGGTATCCTCCAAGCTTCGGT
GGGCTTGTCGCAGGTCGGCGTACCGTATGATTCTGAGACAGGTTGCGATG
CGAGAAATATCTGCCTGCATAGGTATTGCAGTAGCTGCGCCCTCGCAAGT
GCTTGGTGGAATTGTGTTTTTCGCCGGCTCAGCGCGAAAACTCTCCCTGT
TAAAGGAATTTTTCGAGTGATTGGGTGGGGGGTGTAAAGGAGAGTGAGTC
ATATGCGAGTTGCAGCAATACGCCATCATACCGGGGCTTTTTATGCTGCA
CTCGCAGCCTAAAAAGCGTAAGGCGTATCATCAGTTCCCCGATGCCCCGA
AGTATTCGACAACAAAGTCGCATCTCAACAGAAACCAGCCACAGTACATG
TAAGCTGCTTCCGCGAGCTCTGTCTATTCTCCGAATAGAAGTACGACGAA
AAGTGGCGCGTTTTGGGTGGTGAAGTGAGCATGTCGCCGTACCGAATATT
TTCGGTAAGCCCTCATCACGTCGTACGATGGCTCTTCATGGACGGAGCAT
TTTGTTTTCCCGAAACAAAGTGACCATCCGCGTAGTATGTGATTACACGC
TGGGCACCGCTGGATCGGGGCATTTCAATTGCTCATGAAATGCCGATTTA
TCGGTATACAGGTCGCCGGTGCTGTTTCACGTTTGATTTGGAGCGGCTAA
GATGCCCGCCCGCCCCCCCCCGTAAATCCTTGCTCGCAGAATAGCTGCTG
ACCCTTGCACTTCCGGCCTCTCTGTCTGCAACTGGTCTCTTTGTTGCTAT
CCTCAAAGGCACCAGGGAGAATCTATCGTCAGCGATCAAGAACGGCTTCT
GAGCACCACACAACGCACCGTCCAGCCACAGACAAACACGATGACACCAA
CGACAGGGTCTGAAGGTTTCCCAAGTCTTAATGGCGCAAGTACGTGTTCT
GTAATACGATACGTCGTGTTGGGTGCGGAGGAAACGTAGAGATTGGGATT
GCATGATCAGATCACGGGTGTGTTGTAGGTGTCTCGCAAGACCGGATGAA
TGAAGGCTGTTCGGACGTCGTTGCCCCGACGATGCTGCTGTGTCGACTGC
CATGGAGGCAAGCGTTTATGTACGGGCAAAGGGTGGGAATGGCTTATGAC
AACATCGTGTCCGCGCAACATCGTTGAAAAGCCGTGCACACCCGCTATGC
CAGACATGAGTT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:232049..238610- >mRNA_E-siliculosus-1a_M_contig93.17343.1 ID=mRNA_E-siliculosus-1a_M_contig93.17343.1|Name=mRNA_E-siliculosus-1a_M_contig93.17343.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=606bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:232049..238610- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTTTCGGGTGTGGTTCACTTCTCAACGATTTTCTATCATAGTAGTGCCGT
GTTCAGCAACCCTTTGCCCCAGCTCTTTTTCCGATTTTCCACGAGGAGGA
CGTACCTCTGCTCTCCCTGTCCTGTTCCTGCCAGGTGTGTACGACCGGAT
CAACGAGACTGGAACAAGACATCTCACCAGCGCGGACACCGATATCAGCT
TTCGGGTGTGGTTCACTTCTCAACGATTTTCTATCATAGTAGTGCCGTGT
TCAGCAACCCTTTGCCCCAGCTCTTTTTCCGATTTTCCACGAGGAGGACG
TACCTCTGCTCTCCCTGTCCTGTTCCTGCCAGGTGTGTACGACCGGATCA
ACGAGACTGGAACAAGACATCTCACCAGCGCGGACACCGATATCAGGCAC
CAGGGAGAATCTATCGTCAGCGATCAAGAACGGCTTCTGAGCACCACACA
ACGCACCGTCCAGCCACAGACAAACACGATGACACCAACGACAGGGTCTG
AGCACCAGGGAGAATCTATCGTCAGCGATCAAGAACGGCTTCTGAGCACC
ACACAACGCACCGTCCAGCCACAGACAAACACGATGACACCAACGACAGG
GTCTGA back to top
|