mRNA_E-siliculosus-1a_M_contig93.17325.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: D7G906_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G906_ECTSI) HSP 1 Score: 247 bits (630), Expect = 1.110e-82 Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 2
Query: 2 MWAAFARNPRLCVPAAVKACAEFPLRATTVAGSDSRARYWPLEQRRGLSSGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP 391
MWAAFARNPRLCVPAAVKACAEFPLRA VAGSDSRA YWPLEQRRGLS+GSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP
Sbjct: 1 MWAAFARNPRLCVPAAVKACAEFPLRAIAVAGSDSRACYWPLEQRRGLSNGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP 130
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A7S2CEL3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEL3_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.110e-21 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 2
Query: 155 SDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 388
S+ P+ED + L + +E + +V D+SGGCGSMYKIEVESPLFRG LV QHRMV L EI +MHGLT+ TR SP
Sbjct: 53 SEVPKEDLMKEALIAALEPTDVLVEDVSGGCGSMYKIEVESPLFRGVNLVKQHRMVTDTLKKEIGEMHGLTINTRRSP 130
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A4D9DBR1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBR1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.220e-20 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 2
Query: 167 REDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRP 382
RED + ++L + + ++ D+SGGCG+MY +EVES LFRGK LVAQHRMV LA EI++MHGL+L TRP
Sbjct: 52 REDRMRALLSEHFKPTHLLIQDVSGGCGAMYNMEVESELFRGKALVAQHRMVNQVLAKEISEMHGLSLKTRP 123
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A836CI04_9STRA (Bola protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI04_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 6.620e-20 Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 2
Query: 167 REDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 388
+E A+ +L +++A+K V DISGGCGSMY I +ESPLF+G LV QH++VK+ L EIA MHGLTL T+ SP
Sbjct: 40 QEKAMEKLLGKELKATKVTVEDISGGCGSMYSIAIESPLFKGLSLVKQHQLVKSTLKKEIAAMHGLTLQTKVSP 113
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A1V9Y5G4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5G4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 4.060e-18 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 2
Query: 161 SPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 376
S E+ +A L ++ A+ V DISGGCGSMYKIEV SP F GK +VAQHR+V L EIA MHGLTL T
Sbjct: 16 SAAEEKMAVALRQELSATHVKVDDISGGCGSMYKIEVASPTFEGKNVVAQHRLVNQVLKEEIAGMHGLTLKT 87
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A8K0AJV7_ANDGO (Mitochondrial BolA domain-containing protein n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AJV7_ANDGO) HSP 1 Score: 82.4 bits (202), Expect = 5.020e-18 Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 2
Query: 137 RGLSSGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSPP 391
R LS+ ++ P E +I+ IL S ++ SK V DISGGCG + + VESP+FRGK +V QHRMV + L E+ MH L + T+P+ P
Sbjct: 8 RLLSTAAEGPTEASISKILRSALQPSKLNVQDISGGCGVSFAVVVESPMFRGKTIVEQHRMVNSVLKQEMEVMHALRISTKPTSP 92
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A369SM06_9METZ (BolA-like protein 3 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SM06_9METZ) HSP 1 Score: 84.0 bits (206), Expect = 6.860e-18 Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 65 EFPLRATTVAGSDSRARYWPL----EQRRGLSSGSD---SPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 376
E P+ T+ +R W L RR LSS D S E I+SIL+ + S V DISGGCGSMY+I ++S F+GK ++ QHRMVK ALA EI +MHGLT+ T
Sbjct: 50 ELPINTNTLRSESNR---WLLLANNVSRRCLSSQPDLKQSKGEQHISSILKDTVNPSYLEVRDISGGCGSMYEILIQSDNFKGKSIIQQHRMVKEALAEEIKNMHGLTIRT 157
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A7S2H125_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H125_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.120e-17 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 2
Query: 137 RGLSSGSDSP---REDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLTRPSP 388
R LS GS+S +E+++ L + AS V DISGGCG+MYK+EVESP FRG ++ QHR+V L EI +MHGLTL TR +P
Sbjct: 25 RILSIGSESDGVSKEESMRLALSQALNASFVSVDDISGGCGAMYKLEVESPDFRGLNMLKQHRLVTQVLKKEIGEMHGLTLQTRVTP 111
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: A0A067C2D2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2D2_SAPPC) HSP 1 Score: 80.5 bits (197), Expect = 3.440e-17 Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 2
Query: 137 RGLSSGSDSPREDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 376
RGLS+ + E+ +A+ L + A+ V DISGGCGSMYKIEV SP F GK VAQHR+V L EI MHGLTL T
Sbjct: 16 RGLSTTA----EEKMATSLRQALSATHVKVDDISGGCGSMYKIEVASPTFEGKNRVAQHRLVNEVLKEEIGGMHGLTLKT 91
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Match: B3S7G9_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S7G9_TRIAD) HSP 1 Score: 80.1 bits (196), Expect = 7.240e-17 Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 2
Query: 170 EDAIASILESKIEASKAVVHDISGGCGSMYKIEVESPLFRGKGLVAQHRMVKAALATEIADMHGLTLLT 376
E I+SIL+ + S V DISGGCGSMY+I ++S F+GK ++ QHRMVK ALA EI +MHGLT+ T
Sbjct: 45 EQHISSILKDTVNPSYLEVRDISGGCGSMYEILIQSDNFKGKSIIQQHRMVKEALAEEIKNMHGLTIRT 113 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17325.1 >prot_E-siliculosus-1a_M_contig93.17325.1 ID=prot_E-siliculosus-1a_M_contig93.17325.1|Name=mRNA_E-siliculosus-1a_M_contig93.17325.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=131bp MWAAFARNPRLCVPAAVKACAEFPLRATTVAGSDSRARYWPLEQRRGLSSback to top mRNA from alignment at E-siliculosus-1a_M_contig93:15100..16752+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17325.1 ID=mRNA_E-siliculosus-1a_M_contig93.17325.1|Name=mRNA_E-siliculosus-1a_M_contig93.17325.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1653bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:15100..16752+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:15100..16752+ >mRNA_E-siliculosus-1a_M_contig93.17325.1 ID=mRNA_E-siliculosus-1a_M_contig93.17325.1|Name=mRNA_E-siliculosus-1a_M_contig93.17325.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=786bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:15100..16752+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |