mRNA_E-siliculosus-1a_M_contig92.17293.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: D7FKS6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS6_ECTSI) HSP 1 Score: 911 bits (2354), Expect = 0.000e+0 Identity = 526/544 (96.69%), Postives = 530/544 (97.43%), Query Frame = 1
Query: 1 MLRLSLPATPGCWYLSPLPMVSVWRTMFFSLFVVEALAFVPSSTSRIAFSAPPAATTSGQ-PAHERYSSRGIVARSRLPASRSVWGERMSVAGCSKDVPGDATACVVGRDVCTAVDNRNAGTGTAGTSGLTSGGEIGGDGRGGRRLLAIPPLLVAVATGRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGQYQRPRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGSGQRPSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
MLRLSLPATPGCWYLSPLPMVSVWRTMFFSLFVVEALAFVP RIAFSAPPA+ TSGQ P HERYSSRGIVARS+LPASRSVWGERMS AGCSKDVPGDATACVVGRDVCTAVDNRNAGTGTAGT+GLT G EIGGDGR GRRLLAIPPLLVAVATGRSL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG+YQRPRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGSGQRPSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWF RDSRDRDDDRGVEFSVVN RQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL
Sbjct: 1 MLRLSLPATPGCWYLSPLPMVSVWRTMFFSLFVVEALAFVP----RIAFSAPPASRTSGQQPTHERYSSRGIVARSQLPASRSVWGERMSAAGCSKDVPGDATACVVGRDVCTAVDNRNAGTGTAGTTGLTIGDEIGGDGRSGRRLLAIPPLLVAVATGRSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRYQRPRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGSGQRPSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFTRDSRDRDDDRGVEFSVVN-RQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 539
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A7S0QBA5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBA5_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 3.000e-14 Identity = 76/249 (30.52%), Postives = 110/249 (44.18%), Query Frame = 1
Query: 895 RSGRG---GSSQTAVVTTLQLGLYC-DRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
RS RG LQ+ YC DRQ + L L++TAD +S GL L+++ CL LRS +DWL A+ S ++G S+ V + +NR ++ERSKWE E S T ++ TY VATL+V + P E + VN + A++ L D + E +N++ EVLWTP DP+D +DR+D+ +PEL L
Sbjct: 44 RSSRGIEQADEAAGAAYCLQVACYCGDRQNS---LYGKLQSLARTADTSSYEGLQQLVSDTCLATLRSSKDWL---------AARTTSETKGLFSNDV---ESQYNRIVVKERSKWESEQKSLTR---------------TSAGEATYMVATLVVLLRNGSELP------------------------EVTGVNELREAISQL--AADVSIE---DNLIAAEVLWTPEDPNDVMDRDDMFLNFPELVTL 233
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.210e-14 Identity = 77/244 (31.56%), Postives = 112/244 (45.90%), Query Frame = 1
Query: 907 GGSSQTAV-VTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSG--TYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
GGS V V LQ+ L + +G +LA L +++ A+ +S GLST ++EVCL L+R DW+ + +A RA+ FN A+ ER+K ERETVS S S G + G T AV T+++A G + R + R +NS + +L + +A GENVL VE+LWTP +P +SLDR+ + +PEL L
Sbjct: 192 GGSLGRGVGVVKLQVALNASDRSSRG-ILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAPRS-----------AERAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSD--GVRPEDLGKPTQAVVTIVLALKG--ESLKRFQLERS--------------------INSASALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A6P0QZA2_9CYAN (DUF1517 domain-containing protein (Fragment) n=1 Tax=Microcoleus sp. SIO2G3 TaxID=2607795 RepID=A0A6P0QZA2_9CYAN) HSP 1 Score: 81.6 bits (200), Expect = 4.940e-14 Identity = 75/244 (30.74%), Postives = 110/244 (45.08%), Query Frame = 1
Query: 916 SQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTA---PSWGGFSAQKS---GTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
S T V +Q+GL + + Q D LD+L+QTAD ++ GL+ L+ E L+LLR W+ G + E A+ FNR A+ ERSK+ ETV+N ++ +STA P+ GG AQ S G + V TL+VA G ++ +NS A L LG ++ ++ VEVLWTP D+L +DL T + +LR +
Sbjct: 18 SPTVSVAKVQVGLLSEARSLQAD----LDRLAQTADTSTSAGLTQLLQETTLSLLRHPEYWVYAGGETQQTRLEA--------------AELQFNRLALAERSKFAEETVTNYNNQLRGASTAGTLPAGGGALAQASNEPGEFLVVTLLVAAQGK---------------------------LQLPAINSADDARRALSALGAVNSD----RLMAVEVLWTPQAEGDTLSSDDLLTNYTDLRRI 212
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A0M0K0F2_9EUKA (Membrane protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0F2_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 5.820e-13 Identity = 80/247 (32.39%), Postives = 110/247 (44.53%), Query Frame = 1
Query: 895 RSGRG--GSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
RS RG S Q LQ+ YCD + Q + L+K++ +AD +S GL +L+++ CL +LRS +DWL A+ S G + V A +NR + ERSKWE E + TAP TY VATL+V L S P + G D RD AL L AA +N+L EVLWTP D +D +DR++L +PEL ++
Sbjct: 41 RSSRGIEASDQPGAALCLQVACYCDDR--QNSLFGKLNKIASSADTDSELGLQSLVSDTCLAILRSSKDWL---------AARTESEIAGLLKNDVDAA---YNRLVVTERSKWEVEQKALKR-------TAPG--------QPTYMVATLVVL---LRSAQPLKPISQNG----DLRD-----------------ALQNL-----AAAVSVDDNLLAAEVLWTPEDTNDVMDRDELFLNFPELVSV 229
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A8G0W731_9CYAN (DUF1517 domain-containing protein n=7 Tax=Sphaerospermopsis TaxID=752201 RepID=A0A8G0W731_9CYAN) HSP 1 Score: 79.0 bits (193), Expect = 2.210e-12 Identity = 71/250 (28.40%), Postives = 110/250 (44.00%), Query Frame = 1
Query: 910 GSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWL---GGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGG-------FSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
GS+ +T LQ+GL +G Q + L+++++ AD N+P+G + ++ E L LLR W+ GGT K+ A+E + FNR ++ ERSK+ ET+SN ++ S A G F ++ G Y + TL+ A G W +F +NS L +G GE VL +EVLWTP D+L +DL ++P+LR +
Sbjct: 123 GSNPNVSITRLQVGLLAQARGLQSE----LNQIAEKADTNTPQGRAEILQEASLALLRHPEYWVYAGGGTQQAKLNAAESQ-----------------FNRLSLAERSKFSEETLSNVNNQ-LKSVLAKELPGDIDNPTRFISEGPGEYIIVTLLAA-------------TLGKW--------------DFPQINSTNDLRQALRQVGSLP----GEQVLAIEVLWTPQAEGDTLTSDDLLAEYPDLRLV 319
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: UPI0016839E37 (DUF1517 domain-containing protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI0016839E37) HSP 1 Score: 77.8 bits (190), Expect = 5.710e-12 Identity = 74/249 (29.72%), Postives = 110/249 (44.18%), Query Frame = 1
Query: 901 GRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPD--RGFS-SSTAPSWGGFSAQKS---GTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
G G S V +Q+GL + + Q D LD+++QTAD ++ GL+ ++ E L LLR W+ G + E A+ FNR A+ ERSK+ ETV+N + RG S + T P+ GG AQ S G + V TL+VA G ++ +N A L LG +++ ++ VEVLWTP D+L +DL T + +LR +
Sbjct: 126 GSGYDSPAVSVAKVQVGLLSEARSLQTD----LDRIAQTADTSTSAGLTQVLQETTLALLRHPEYWVYAGGETQQARLEA--------------AELQFNRLALAERSKFAEETVTNYNNQLRGTSPAGTLPAAGGALAQTSDSPGEFIVVTLLVAAQGK---------------------------LQLPAINGADDARRALSQLGAVSSD----KLMAVEVLWTPQAQGDTLSSDDLLTNYTDLRRI 325
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A7U3NLW2_9CYAN (DUF1517 domain-containing protein n=1 Tax=Anabaenopsis elenkinii CCIBt3563 TaxID=2779889 RepID=A0A7U3NLW2_9CYAN) HSP 1 Score: 77.4 bits (189), Expect = 6.880e-12 Identity = 69/245 (28.16%), Postives = 110/245 (44.90%), Query Frame = 1
Query: 913 SSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWL---GGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDR---GFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
S+ VT LQ+GL +G Q + LD+++++AD NSP+G + ++ EV L LLR W+ GGT VK+ A+E + FNR ++ ERSK+ ET+SN ++ P S + G Y + TL+ A G +E VNS +L +G + G+ +L +EVLWTP D+L +D+ ++P+L+ +
Sbjct: 124 SNPPVSVTRLQVGLLAQARGLQTE----LDQIAESADTNSPQGRAEVLQEVSLALLRHPEYWVYAGGGTQQVKLNAAESQ-----------------FNRLSLAERSKFSEETLSNVNNQLKAALKKEALPPADQLS-EAPGEYLIVTLLAATLGK---------------------------LEIPDVNSADDLRQVLRRIGGIS----GDQLLAIEVLWTPQAQGDTLTSDDILAEYPDLKLV 315
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: K9QD55_9NOSO (Uncharacterized protein n=11 Tax=Cyanobacteria TaxID=1117 RepID=K9QD55_9NOSO) HSP 1 Score: 77.4 bits (189), Expect = 7.510e-12 Identity = 69/251 (27.49%), Postives = 108/251 (43.03%), Query Frame = 1
Query: 913 SSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWL---GGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDR---GFSSSTAPSWGGFS------AQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
S+ VT LQ+GL + D+ L+K+++ AD NSP G + ++ E L LLR W+ GGT K+ ++E + FNR A+ ERSK+ ET+SN ++ + P+ G ++ G Y + TL+ A G TP +NS +S +L +G GE +L +EVLWTP D+L +DL ++P+L +
Sbjct: 125 SNPNVSVTRLQVGLLAQAR----DLQPELNKIAEIADTNSPEGRAAVLQETSLALLRHPEYWVYAGGGTQQAKLSSAESQ-----------------FNRLALAERSKFSEETLSNVNNQLKAALAKEALPASGELDNPTKLISEGPGEYIIVTLLAATLGKLETP---------------------------AINSTESLRQVLRQIGSIP----GEQLLAIEVLWTPQAEGDTLSSDDLLAEYPDLMLV 323
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Match: A0A8J7B5L9_9CYAN (DUF1517 domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 07298 TaxID=2777970 RepID=A0A8J7B5L9_9CYAN) HSP 1 Score: 74.7 bits (182), Expect = 1.700e-11 Identity = 70/240 (29.17%), Postives = 111/240 (46.25%), Query Frame = 1
Query: 910 GSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFARDSRDRDDDRGVEFSVVNSRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 1629
GS+ V LQ+GL + +G Q D L++L+ TAD + +GL+ L+ E L LLR W ASE K + + A+++FNR A+ RS++ ET+SN ++ + G + Q G Y +AT++VA G P +S + RQ+ L +G + GEN+L VEVLWTP ++L ++L ++PEL+ +
Sbjct: 41 GSNPPVAVAKLQVGLLAEARGLQDD----LNRLATTADTGTSQGLAKLLQETTLALLRHPDYWA-------YAASED-------KQTRLLSAEQEFNRYALSARSRFSAETLSNVNNQLTQAEIQAKLPGDADQAPGEYILATVVVATQGKLDLPDI-----------------------YSSADLRQA----LSHIGAVS----GENLLAVEVLWTPQQSGETLSGDELIAQYPELKLI 231 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig92.17293.1 >prot_E-siliculosus-1a_M_contig92.17293.1 ID=prot_E-siliculosus-1a_M_contig92.17293.1|Name=mRNA_E-siliculosus-1a_M_contig92.17293.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=544bp MLRLSLPATPGCWYLSPLPMVSVWRTMFFSLFVVEALAFVPSSTSRIAFSback to top mRNA from alignment at E-siliculosus-1a_M_contig92:514300..517234+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig92.17293.1 ID=mRNA_E-siliculosus-1a_M_contig92.17293.1|Name=mRNA_E-siliculosus-1a_M_contig92.17293.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2935bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:514300..517234+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:514300..517234+ >mRNA_E-siliculosus-1a_M_contig92.17293.1 ID=mRNA_E-siliculosus-1a_M_contig92.17293.1|Name=mRNA_E-siliculosus-1a_M_contig92.17293.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3264bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:514300..517234+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |