mRNA_E-siliculosus-1a_M_contig92.17288.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17288.1
Unique NamemRNA_E-siliculosus-1a_M_contig92.17288.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: D7FL12_ECTSI (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL12_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 3.550e-188
Identity = 272/283 (96.11%), Postives = 275/283 (97.17%), Query Frame = 1 
Query:    1 MSEMQKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGFGRQSRLEKVLMAASERFSSVFSEERRWMVIAGTAAVVVTVGVLRVVSRFRDGGIREGRARS 849
            MSEMQKVLLFGLSGNPPTGR GHGG+IEYFVNL RFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEM+NSRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDL KGKWRKSEELMNMVSL IVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVE SVLRYMKDHRLYGFGRQSRLE VL+AASERFSSVFSEERRWMVIAGTAAVVVTVGVLRVV RFRDGGIR GRARS
Sbjct:    1 MSEMQKVLLFGLSGNPPTGRDGHGGMIEYFVNLARFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMLNSRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLRKGKWRKSEELMNMVSLAIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVETSVLRYMKDHRLYGFGRQSRLENVLVAASERFSSVFSEERRWMVIAGTAAVVVTVGVLRVVGRFRDGGIRGGRARS 283
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: A0A835ZEG0_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.790e-63
Identity = 111/225 (49.33%), Postives = 147/225 (65.33%), Query Frame = 1 
Query:   16 KVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSRGTGP-----ARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGFGRQ 675
            KVLLFG SGNPPTGR GHGGI+ YF     + EIW++PVY+HMFS KR +M++ GA T++ R+EMC+LAFE  S  +C V+ L TE+EVF +M+ +    P      R  TYDV+ YL+KQHPD EFS +LG D Y DL KGKW  S+EL++    V+VDR GV P  + +  G  +HH   LT VSS+ +R +     L+   A+  +V  YM+ H LY FGR+
Sbjct:   16 KVLLFGTSGNPPTGRGGHGGIVHYFCESGLYDEIWIMPVYRHMFSHKRTSMSQPGAATFDQRLEMCKLAFEQESCDTCCVKALPTEREVF-DMLAAADPDPHAVERIRVCTYDVLKYLRKQHPDAEFSFVLGMDAYVDLLKGKWAHSKELLDETEFVVVDRRGVMPHHDAVPHGTHIHHVGDLTAVSSSAVRASDDLAFLQDPTALHHAVYSYMQAHGLYAFGRR 239
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: H3GJQ3_PHYRM (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJQ3_PHYRM)

HSP 1 Score: 166 bits (419), Expect = 2.850e-44
Identity = 100/224 (44.64%), Postives = 141/224 (62.95%), Query Frame = 1 
Query:   13 QKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYST---ASCRVRVLRTEQEVFA-EMINSRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGVR-PETENLLSG-VELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGF 666
            ++VLLFGLS NPPTGRAGH G++++ + L  + EIW+LPVYQH++S+KR+      AP +E R+EMCRLA E+      AS R++V++ E+E+F      S      R  + D+V Y+  +HPD  F++LLG DTY DL  GKW++  ELM +V L++VDR GV  P  E   +  V+  H P L+DVSST +R       LE  L  + +VL Y+  H+LY F
Sbjct:    6 REVLLFGLSANPPTGRAGHMGVVQHCLPL--YDEIWLLPVYQHIYSSKREL-----AP-FEHRLEMCRLALETLQRDGDASARLKVVQEEREMFEYAAAASDSLEQLRLGSIDLVHYMLDKHPDTSFTMLLGGDTYADLLAGKWKRGNELMQLVKLLVVDRKGVASPWREGQTADRVKYLHVPELSDVSSTMVRATSDRAELEKLL--DPAVLDYIVQHKLYAF 219
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: G4ZH97_PHYSP (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZH97_PHYSP)

HSP 1 Score: 162 bits (411), Expect = 4.170e-43
Identity = 97/228 (42.54%), Postives = 138/228 (60.53%), Query Frame = 1 
Query:   13 QKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTAS---CRVRVLRTEQEVFAEMIN-SRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGV------RPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGF 666
            ++VLLFGLS NPPTG AGH G++ +   +  F EIW+LPVYQH++S+KR+      AP +E R+EMCRL  ES   A      +RV++ E+E+F      S      R  + D+V+YL+ ++ D  F++LLG DTY DL  GKW++ +ELM +V L++VDR GV      + E       V+  H P L+DVSSTK+R       LE  L  + +VL Y+ +H+LY F
Sbjct:    4 REVLLFGLSANPPTGAAGHMGVVRHCRPM--FDEIWLLPVYQHIYSSKRQL-----AP-FEHRVEMCRLVLESLQRADDAGAALRVVQEEREMFERAAAASDNAEQLRLGSIDLVLYLRDKYRDTSFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRKGVESPWRDKQEXXXXXXRVKYLHVPELSDVSSTKVRATADRTELEQHL--DPAVLNYIVEHKLYAF 221
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: A0A6G0XR91_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR91_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.850e-42
Identity = 89/219 (40.64%), Postives = 133/219 (60.73%), Query Frame = 1 
Query:   16 KVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSRGTGPA--RSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGF 666
            KVL+FG S NPP G  GH G++E+F   + F ++WVLPVYQH++S+K+         +++ R  M  +A ++      RVR+  TE++V+ + +  +   P+  R  T D+VV+L+  +PD++FS+LLG DT+ DL KGKW+   +L++M+SLV++ R GV  E +     V   H P L D SSTK R +RA+        V  SVL Y+K HRLY F
Sbjct:    2 KVLVFGTSANPPCGMGGHMGLVEHFA--QEFDQVWVLPVYQHIYSSKQHL------ESFDHRFAMLEIARKAIPHGD-RVRIQTTEKDVWMKALEDKSVDPSSIRIGTVDIVVHLQATYPDIKFSMLLGADTFMDLLKGKWKGGLQLLDMLSLVVLPRAGV--ELDRSHPNVTFVHVPTLDDSSSTKARRSRAD----AEAVVLPSVLEYIKTHRLYAF 205
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: A0A6A3F4I0_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F4I0_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.260e-42
Identity = 98/227 (43.17%), Postives = 142/227 (62.56%), Query Frame = 1 
Query:   13 QKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYST---ASCRVRVLRTEQEVFAEMIN--SRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGV----RPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGF 666
            ++VLLFGLS NPPTG  GH G++ +   +  F EIW+LPVYQH++S+KR+      AP +  R+EMCRLA E+      A   ++V++ E+E+F E++   S G    R  + D+V+YL  ++ D  F++LLG DTY DL  GKW++ +ELM +V L++VDR GV    R + E     V+  H P L+DVSSTK+R A     LE  L  + +VL Y+ +H+LY F
Sbjct:    4 REVLLFGLSANPPTGSTGHMGVVRHCRPM--FDEIWLLPVYQHIYSSKRQL-----AP-FAHRLEMCRLALETLQREDGAGAALKVVQEEREMF-ELVAAASDGAEQPRLGSLDLVLYLLDKYRDTNFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRQGVESPWRDQQEQ--ERVKYLHVPELSDVSSTKVRAAADRSELEKHL--DPAVLDYIVEHKLYAF 217
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: A0A024UBZ2_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBZ2_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.220e-41
Identity = 97/224 (43.30%), Postives = 132/224 (58.93%), Query Frame = 1 
Query:   10 MQKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSR--GTGPA--RSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGFG 669
            M++V++FG S NPP G  GH G +E+F     F E+WVLPVYQH++S+KR         T+E R+ M  LA ++      RVRV++ E++V+   + +   GT P   R  T D+V +LK QHPDVEFS LLG DTY DL +GKW+    L++MV LV++ R GV+ +T    S V +   P L D SSTK R +R          V   VL YM+ H+LY FG
Sbjct:    1 MKRVVVFGTSANPPCGMGGHMGCVEHFAC--EFDEVWVLPVYQHIYSSKRHL------ETFEHRVAMLELARQAIPHGD-RVRVVQAEKDVWMHALAAAPAGTDPCSIRIGTVDIVEHLKTQHPDVEFSWLLGADTYMDLLQGKWKGGLALLDMVPLVVLPREGVKLDTSAHPS-VTISSIPSLDDSSSTKARQSRDA----AASLVLPPVLAYMQAHKLYAFG 210
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: W7TES1_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TES1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.280e-41
Identity = 97/244 (39.75%), Postives = 143/244 (58.61%), Query Frame = 1 
Query:   19 VLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAF--------ESYS----------TASCRVRVLRTEQEVFAEMIN---SRGTGP--ARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGV--RPETENLLS-GVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGFGR 672
            VLLFGLS NPPTG+AGH GI+ +    +++ EIWV+PVY+HM +   + +       +EDR +MCRL F         SYS          T   RV+V+R E+EV    I    +RG GP   +  T DVV+Y K++ P+ +FSL+LGTDT+ D+ +GKW++  EL+++VS+V++ R GV   P+ +  L+  +  ++ P L +VSST +R      LL   L  E  VL Y+++  LY  GR
Sbjct:   68 VLLFGLSANPPTGQAGHAGIVRFLREQDQWDEIWVMPVYKHMHAKNHQLV------DFEDRYQMCRLNFTCPSSYGASSYSASPPSAKGPPTTRTRVKVVRLEKEVAKNFIAEAAARGQGPETVKVGTIDVVLYAKERMPNTDFSLVLGTDTFNDMKRGKWKRGRELLDLVSVVVISRPGVPYAPQEDEFLNHNLHFYNVPSLGEVSSTAVRKTTDLRLLREVL--EPRVLEYIRERGLYTIGR 303
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: A0A662XHT9_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHT9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 7.220e-41
Identity = 95/236 (40.25%), Postives = 147/236 (62.29%), Query Frame = 1 
Query:   13 QKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTAS-CRVRVLRTEQEVFAEMINSRGTGP--ARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGVRP---ETENLLSG----VELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGFGRQSRLEK 690
            ++VLLFGLS NPPTGR GH G++ +   L  F E+W+LPVYQH++S+KR+      AP +  R+EMCRLA  +   +   +V+V+  E+E+F E + +    P   R  + D+V++L ++HP+  F+++LG DTY DL  GKW++ EELM +V L++VDR GV     +TE  ++     V   H P L++VSST +R +   +LL   L  +A V+ Y+ +H+LY F  +   E+
Sbjct:   31 REVLLFGLSANPPTGRTGHMGVVAHCRPL--FDEVWLLPVYQHIYSSKRQL-----AP-FHHRVEMCRLAIAALEESDGAQVKVVEEEREMF-EHLAAASDRPHELRLGSIDLVLFLLEKHPNTNFTMVLGGDTYADLLAGKWKRGEELMRLVKLLVVDRKGVDSPWRQTEEQVAASATRVRYVHAPELSEVSSTMMRASPDRELLARYL--DAEVVGYIVEHQLYAFASEQDKEQ 255
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Match: K3WUW0_GLOUD (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUW0_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 1.990e-40
Identity = 96/229 (41.92%), Postives = 136/229 (59.39%), Query Frame = 1 
Query:   10 MQKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTAS-CRVRVLRTEQEVFAEMINSRGTGPA--RSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEELMNMVSLVIVDRMGV-----RPETENLLSG--VELHHPPLLTDVSSTKIRDARAEDLLEGTLAVEASVLRYMKDHRLYGF 666
            M++VLL+G S NPPTG   H G + Y  +L  F E+W+LPVYQH++S+KR+      AP +  R++MC+L        +   V+V   E+E+F E + ++   P   R  + D++ YL++QHPD  F+LLLG DTY DL  GKW+  +EL  +V L+++DR GV     + E EN  S   V   H P L+D+SSTK+R  R  D+ E    V A V  Y+  HRLYGF
Sbjct:    1 MKEVLLYGTSANPPTGLQAHMGAVAYCRSL--FDEVWLLPVYQHIYSSKRQL-----AP-FPHRVQMCKLVTNVLPKDNGALVKVQECERELF-EHLAAQTAAPEELRIGSIDLIKYLREQHPDASFTLLLGADTYNDLRTGKWKNGDELQTLVKLLVMDRKGVDAPSQQHENENATSTDRVRFIHIPGLSDLSSTKVRATR--DVNELRSFVGADVAEYIVHHRLYGF 218
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL12_ECTSI3.550e-18896.11Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A835ZEG0_9STRA1.790e-6349.33Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
H3GJQ3_PHYRM2.850e-4444.64Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
G4ZH97_PHYSP4.170e-4342.54Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A6G0XR91_9STRA4.850e-4240.64Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A6A3F4I0_9STRA5.260e-4243.17Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A024UBZ2_9STRA4.220e-4143.30Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
W7TES1_9STRA4.280e-4139.75Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A662XHT9_9STRA7.220e-4140.25Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
K3WUW0_GLOUD1.990e-4041.92Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:418837..424124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size858
Model size1644
Exons7
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.H
EggNOG OGs2RY55@2759,COG1057@1
EggNOG free text desc.Cytidylyltransferase-like
Seed eggNOG ortholog2880.D7FL12
Seed ortholog evalue5e-151
Seed ortholog score540.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17288.1prot_E-siliculosus-1a_M_contig92.17288.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig92 418837..423338 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936464.1806848-CDS-E-siliculosus-1a_M_contig92:418836..4189361622936464.1806848-CDS-E-siliculosus-1a_M_contig92:418836..418936Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 418837..418936 +
1696251090.6493742-CDS-E-siliculosus-1a_M_contig92:418836..4189361696251090.6493742-CDS-E-siliculosus-1a_M_contig92:418836..418936Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 418837..418936 +
1622936464.1965537-CDS-E-siliculosus-1a_M_contig92:420312..4204271622936464.1965537-CDS-E-siliculosus-1a_M_contig92:420312..420427Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 420313..420427 +
1696251090.6643622-CDS-E-siliculosus-1a_M_contig92:420312..4204271696251090.6643622-CDS-E-siliculosus-1a_M_contig92:420312..420427Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 420313..420427 +
1622936464.2091007-CDS-E-siliculosus-1a_M_contig92:420562..4206611622936464.2091007-CDS-E-siliculosus-1a_M_contig92:420562..420661Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 420563..420661 +
1696251090.6753876-CDS-E-siliculosus-1a_M_contig92:420562..4206611696251090.6753876-CDS-E-siliculosus-1a_M_contig92:420562..420661Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 420563..420661 +
1622936464.2200782-CDS-E-siliculosus-1a_M_contig92:421060..4211241622936464.2200782-CDS-E-siliculosus-1a_M_contig92:421060..421124Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 421061..421124 +
1696251090.690048-CDS-E-siliculosus-1a_M_contig92:421060..4211241696251090.690048-CDS-E-siliculosus-1a_M_contig92:421060..421124Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 421061..421124 +
1622936464.231103-CDS-E-siliculosus-1a_M_contig92:421519..4216221622936464.231103-CDS-E-siliculosus-1a_M_contig92:421519..421622Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 421520..421622 +
1696251090.7029123-CDS-E-siliculosus-1a_M_contig92:421519..4216221696251090.7029123-CDS-E-siliculosus-1a_M_contig92:421519..421622Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 421520..421622 +
1622936464.2443123-CDS-E-siliculosus-1a_M_contig92:422318..4224311622936464.2443123-CDS-E-siliculosus-1a_M_contig92:422318..422431Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 422319..422431 +
1696251090.712969-CDS-E-siliculosus-1a_M_contig92:422318..4224311696251090.712969-CDS-E-siliculosus-1a_M_contig92:422318..422431Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 422319..422431 +
1622936464.2562754-CDS-E-siliculosus-1a_M_contig92:423074..4233381622936464.2562754-CDS-E-siliculosus-1a_M_contig92:423074..423338Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 423075..423338 +
1696251090.7235653-CDS-E-siliculosus-1a_M_contig92:423074..4233381696251090.7235653-CDS-E-siliculosus-1a_M_contig92:423074..423338Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 423075..423338 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936464.2703502-UTR-E-siliculosus-1a_M_contig92:423338..4241241622936464.2703502-UTR-E-siliculosus-1a_M_contig92:423338..424124Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 423339..424124 +
1696251090.7340834-UTR-E-siliculosus-1a_M_contig92:423338..4241241696251090.7340834-UTR-E-siliculosus-1a_M_contig92:423338..424124Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 423339..424124 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig92.17288.1

>prot_E-siliculosus-1a_M_contig92.17288.1 ID=prot_E-siliculosus-1a_M_contig92.17288.1|Name=mRNA_E-siliculosus-1a_M_contig92.17288.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=286bp
MSEMQKVLLFGLSGNPPTGRAGHGGIIEYFVNLERFSEIWVLPVYQHMFS
AKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMIN
SRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLHKGKWRKSEEL
MNMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLL
EGTLAVEASVLRYMKDHRLYGFGRQSRLEKVLMAASERFSSVFSEERRWM
VIAGTAAVVVTVGVLRVVSRFRDGGIREGRARSAP*
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mRNA from alignment at E-siliculosus-1a_M_contig92:418837..424124+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig92.17288.1 ID=mRNA_E-siliculosus-1a_M_contig92.17288.1|Name=mRNA_E-siliculosus-1a_M_contig92.17288.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5288bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:418837..424124+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCAGAGATGCAGAAAGTTCTGCTGTTTGGACTATCAGGGAACCCTCC
GACAGGCCGAGCTGGGCACGGCGGCATCATTGAGTACTTCGTCAACCTAG
GTGTGTGTTACGCCTGTACCTTGTCCGGTGCAGTTCTTCCAGTGTCTACC
TCGTGTAGAAGAACTTCTACTGTTGTGTGCACCACACCAATCAATGTGTT
TTTGAACTCGTACCGATGTGCTGTGTGTATGCTACGATCTACACGAGACA
TGACCATGCAGAGTTCAAAACTTTCAAACTTGGCAACGACCAGCGACCCC
TTCAAACATGTACTGGGGCCCGGGTTGTACCAACATTGACCTTTGGCGAG
GCCCGCGTCTACATGGATGCAGAGCATGCAGTAGAATGTCTCCCACTTTG
TGGTACTTCTAACTCTGATGTGTAACAAATGCCGTCTGGGAGTTGTGCTG
GTCGGTGCCGCTTCAGCGACCTCAAAATAGGTCGCGTACAATAGTAAAAG
CCCATTTCTTTGGTTCTCGAACGCTTCAAAGCACACGGCAGTGACTGCAA
CTCAGAGCCTGCGTGAGTGCCTTTGAGCACCACCAATTTTGACTCTCTGT
TCACATACCCTACTCATTCGCTGTGATCGATTTGAAGCCCCGGGGTCGTG
CACAGCAGTAGGTCTAGCCTCAGGCGGTACAATAATAAGTGTTAACTGGT
GCGCACGGACTTGGGAACCTATCTACTCTGTTGTACTACCGTTTACTCTC
GCGCGAAAAGTGCGGAGGGAGGCCTTTGTCGCGATTGTAGACGTGTAGTA
TGGAATGTAGCATAGGACTGAAGTTCAGCTTGGAAAAAGAAATAGCGTCA
GGCTTTTCCAGTTTCACTTCAGGGAGGTGAGATCTGCACAACTCCCCCGC
GTGCAAAAGTTGCAGACGAGCGTGTCCGTTCCGTAGACGGCAGGATTTCC
ACTGCAGATGATGTGCGAGCGTTGACACCTTGTAGGCAGCCCTGGTCAGC
TCTGTGGGGAAACGTTGTAGAGAAGACCCAGCTTTCTCTGTCTGTCTCGT
CTGTCTGTCTGCCTGCCTGGTTGCCTGCCTGCCTGGTTGCCTGCCTGCCT
GCCTCTGCCCCTGTGTGCACGTGCGTGTGTGTGTTGCCGTTGCGACCACG
CTGGGCGTTATGTTTCTGTGTGGCAAACAAAAACTGTATTCCATGCAAGT
GGTCCCTCCGGAGTGGGCGCATGAGAGCAAAGCAGTGTCATCAAGGGGTA
TTGCAAGATGAAAATACAGCAGGCAGCAGGACCAACGAACAGCTGACTGC
CAGGTGCGGTGTGACCTTTCCCAAGCTCAACAGAATACACAGCTGACGGG
CTGGTTCTCTCACTCTCCTACCCCCCTTCCCTCTCCCGTCCGCCCCCCTC
CCTTCATCTTATCTCCGATGGAAACAATCGCAACTTTCGAAACCGAACGT
GCGATCACACACGGCGGAGCACTCAGAACGTTTCAGCGAGATCTGGGTCC
TCCCGGTGTACCAGCACATGTTCTCGGCCAAGAGAAAAGCAATGGCGAAG
ACGGGCGCTCCGACGTACGAGGACAGAATAGAGATGTGCAGGTAATAAGG
GAACCTCTGATCCTTGCGCTCTGCCATACATCATGCCCGTCGCTGTGGTT
TTCTCTTCGTCGTCGGCTCATAGCGGATAGTAACTCGAAGTCGCGTCTTC
TTTCGGCGGCCGATTCCCCTGCCCAGGCTCGCCTTCGAAAGCTACTCCAC
CGCGAGCTGCAGGGTGCGCGTGTTAAGAACGGAGCAGGAGGTTTTCGCGG
AGATGATCAACTCTCGAGGGACCGGGTGAGGCTTGGTGCCCCGCTTCAAC
GTTTCGCTCCTGCCCTTCCGGCAGCTTTAGAGAGAATGTCCGCAAGATCG
TGCAGTTGATGGAAGTTTTCCCCCCTTTGTCTCGGCAAGGAGTGTACACC
GTTACGTAAGACGTTACTGGTGCGGGCTAATTCTTGAGCAGATTCAGATT
CCATCCCCCGGGAGGTTTCGGAGCCCGGCTCAACTGGCGTAAACGCGGGC
CCTCCGCTGCAGCATGTCGCTCGAGTAGGGTGGTTCGAAAGTTGGCACCT
CCCGATGGCTGGTAGACGCGTACCCTTACCCTGTGCCTGGTGTGAACAGA
ATGCGCGCGCGATGGCTTCACGAACCCCTCCCCTGGCCTCTGTACACACG
GGTTTCGTGACATGAAACCAATAGGCCAGCGCGGTCAAGCACCTACGACG
TGGTGGTCTACCTGAAGAAGCAACACCCCGACGTTGAGGTAAAGAGATAC
CGGTTGTTTGCTTGCCTCACACGCTGGAATGAGTCATGAACTCTTACGTA
CAAGTGAAGCTTCCAGAACCTCCTCAACCCCCCCAAGCCCCCCTCTCCTT
CGATGAGGGATACCCTGTCCTTTCCCTGCCCCCGTCCCCCCTTCATGGTT
GTGTAGCCTACAGTGGAGGTCCCCAAGAAAGGTGGTCTGAGTACGGCGGT
CGCCCTACATGAGGCGGGTGAAATTGACTGGCATGGGCGGAAGAATAATT
TTTTTCTACACATGGAATACATACAGGTGGCTGCCCCATATTAGGCGGTC
AGTATCAGCTGCCCCACGACCGCCTTATTCGGGAAATCCCCACTGTTTTG
CTGTGTTTTGCCTGTGGTGCGTCGCGGCAACAGTTCTCGTTGCTGCTCGG
GACGGACACGTACCAAGACCTCCACAAGGGGAAGTGGCGCAAGTCCGAGG
AGCTGATGAACATGGTGTCCTTGGTCATCGTCGATAGTAAGTCACGTCAG
CTCATTTGGATCGAGTTGAGACACCGCTGTCTCTATTTTTTTGCTTCTAC
TTTTAATTTATAAATCAGCGCTCACAGCATGTCCGTCGGGTAGCTCCAAA
TCCGTGGTCATACAGAACGGTTGCTCTCCCTGAGGGCGCTCCTGTGCTTG
CCTTCGATTTTGAATGCGAGCAGAGTGCTACACTCTCTTCCCTCAAACTG
TACACATGAACTAACGCTTTTCCACTTGATATTCAACGTTTGCCTGAAAT
GGCACCCATGATAATGTTGGAGGGTTTGCTACATTGCTGGGGAGGTGCGG
AGGACAAACGTGTGGTAGGAGTACCGTTTCCCAGTGGTTTGTACTGTAGA
CGATGTTCTGCTTCAACTGCGGTTTACACCACGGCAGCAGTCACGTCGTC
GGAGGTTTTTGTGCGGTACGGCGTTTTGTGACTATTTGTATACCAACCAT
TGCTTGTCGCGTGTAAACCCTTGGCACCTTGAATTCCCGTTGCCAAGATA
CTTTGTCAATTAGCATTTTCTCCGACCACTTCCTGCTCTCCACACCCCCC
TCATCCCTGTCTGCCCTTGGTGGGAATACGCGTAGCTAGCAACGGGCCGG
CATGACGATGCCCTCCCTTCAGTCCCTCATTATGCACGTGACATGTTGTA
TTCGCCGCACCTTTGACTCCACCGGGTGGCAGGAATGGGAGTGCGACCCG
AGACGGAGAATCTGCTCTCTGGAGTAGAGTTGCACCACCCGCCCTTGCTC
ACGGATGTCTCGTCGACAAAAATTCGGGACGCAAGAGCGGAAGATGTGAG
ATTTGCTTTACACACCAGAAGGGAGGGGGGCAGGGATGAGGGAGGAGGAG
GAGGAGATATGCACAACTATCTGATTGGCCGCCGAAGCTGTTGTGGTTTT
GTCTGTCGCTCAAACATGGTCGGTTGTCCTTCTGTGGCGATATCGGTGTC
GATCCGAGCACGTTTGCCGTTGTGGTCGGATCCACGTCCCATGCTTTCGA
CATATTCTTCAAAGGAAATAGAGCACTTGCATGGAAGACGACAGCAGGAC
AAGGAAGAGGTAGTCAAAACATCTACAAACATATCTGTCCTGCTAGCGCC
GTATAAGAGACACACCTATACTCGAAGGCCACGTTTCATGTATCAAATGC
AACCGGCTGCATTCAACTCCGCGTATCCATTTTCAATCGACACGTTCCCG
TCGACCTTTGTCACCTGCATTTTCACCCACCCCTCCTAGCTCTGGGTATA
TGCGCCCTCTTTCCGTTTTCTGCTTTTATTTCTTTCCCACCGAAAATCAA
GCACTCGTCTCCTCGTTTCTTCCTTTCCGTTTTCTGCTTTTATTTGTTTC
CCACCGAATCAAGCACTCGTCTCTTCTCTCGATTCTCAACCTCGTCTTGA
TTTGTCGGGCGTTTATTTTTTTATTTACATGGACACAGCTCCTCGAAGGC
ACGCTGGCGGTAGAGGCCTCGGTCCTGCGGTACATGAAGGACCACCGCCT
CTACGGCTTCGGCCGGCAGTCGCGGCTGGAGAAGGTGCTCATGGCGGCGT
CAGAACGGTTCTCGTCGGTCTTCTCGGAGGAGCGGCGGTGGATGGTCATC
GCGGGCACGGCAGCTGTCGTGGTGACCGTCGGAGTGTTGCGGGTTGTCAG
CCGATTTCGGGACGGCGGCATTCGAGAGGGAAGAGCCCGCTCGGCTCCCT
AAGAGAGAACATGCTCGGCCCGAACGATAACGATTTGCCGACTCGGCGTA
GGAAAAAGGGTTGTGGATTGTATTTTAAAGAAAAAATACAAGTACAAACA
TCGAAAGACTACCCGTTCGAGAAAAAGCCACAGTCGAAGGGGATGTGTTG
AAGTCTTTACAATGAATGGTAAAACCAACTGGGTACTGGGCTTATTTTGA
GTCGTTTTTAAGCCTATACACTGATTATTTGTTCATATGATCAGTGATAC
CAGTAGGTGCTAAGCACAAAAGCGAAAATCATGTTAGTTTTTAAAAGAAG
AAATACTTTGTTACACGTTCATATCTTTTCTGCCTGTCTATTTTGTGTAT
CGTTCGTTTCGGTGGACTAGTTTTTACGTTGTTGATGGGAAGAGTATCTG
CCCTGCGCCTGGCACGACCAGCTTTCACTTTCCTTCGGTTTTGGTCCTCC
CGCCCGCGTGCGTGATTCTGCATCACCACTATGTAGTATTTGTTTCGGTG
GTGTGGGTTGTGTGATGTATTGTGGATGGATGTTGGAGATAACAGATTTC
TCTTGTTCACACTAAGGGGGGATATTCCCCGGAGGATATGGTCTGGAAGT
CGAGCCTTCATAGGCCTTGTGTTGGGTTTGAGGGGCTACATTTTCCCTAG
ACCAAGCATGCCGAGACTAGGCTAGTCAGTCAAACGGCGGTGCGAGAGCT
CTACTTCACCGCACATTGGCAAGGGCTATCCATTTGCCAATATAACCTGG
GTAGAATTGATAGCCGGGTTGTGTGTGTTCTGGGTGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:418837..424124+

>mRNA_E-siliculosus-1a_M_contig92.17288.1 ID=mRNA_E-siliculosus-1a_M_contig92.17288.1|Name=mRNA_E-siliculosus-1a_M_contig92.17288.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1716bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:418837..424124+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCAGAGATGCAGAAAGTTCTGCTGTTTGGACTATCAGGGAACCCTCC
GACAGGCCGAGCTGGGCACGGCGGCATCATTGAGTACTTCGTCAACCTAG
ATGTCAGAGATGCAGAAAGTTCTGCTGTTTGGACTATCAGGGAACCCTCC
GACAGGCCGAGCTGGGCACGGCGGCATCATTGAGTACTTCGTCAACCTAG
AACGTTTCAGCGAGATCTGGGTCCTCCCGGTGTACCAGCACATGTTCTCG
GCCAAGAGAAAAGCAATGGCGAAGACGGGCGCTCCGACGTACGAGGACAG
AATAGAGATGTGCAGAACGTTTCAGCGAGATCTGGGTCCTCCCGGTGTAC
CAGCACATGTTCTCGGCCAAGAGAAAAGCAATGGCGAAGACGGGCGCTCC
GACGTACGAGGACAGAATAGAGATGTGCAGGCTCGCCTTCGAAAGCTACT
CCACCGCGAGCTGCAGGGTGCGCGTGTTAAGAACGGAGCAGGAGGTTTTC
GCGGAGATGATCAACTCTCGAGGGACCGGGCTCGCCTTCGAAAGCTACTC
CACCGCGAGCTGCAGGGTGCGCGTGTTAAGAACGGAGCAGGAGGTTTTCG
CGGAGATGATCAACTCTCGAGGGACCGGGCCAGCGCGGTCAAGCACCTAC
GACGTGGTGGTCTACCTGAAGAAGCAACACCCCGACGTTGAGGCCAGCGC
GGTCAAGCACCTACGACGTGGTGGTCTACCTGAAGAAGCAACACCCCGAC
GTTGAGTTCTCGTTGCTGCTCGGGACGGACACGTACCAAGACCTCCACAA
GGGGAAGTGGCGCAAGTCCGAGGAGCTGATGAACATGGTGTCCTTGGTCA
TCGTCGATATTCTCGTTGCTGCTCGGGACGGACACGTACCAAGACCTCCA
CAAGGGGAAGTGGCGCAAGTCCGAGGAGCTGATGAACATGGTGTCCTTGG
TCATCGTCGATAGAATGGGAGTGCGACCCGAGACGGAGAATCTGCTCTCT
GGAGTAGAGTTGCACCACCCGCCCTTGCTCACGGATGTCTCGTCGACAAA
AATTCGGGACGCAAGAGCGGAAGATGAATGGGAGTGCGACCCGAGACGGA
GAATCTGCTCTCTGGAGTAGAGTTGCACCACCCGCCCTTGCTCACGGATG
TCTCGTCGACAAAAATTCGGGACGCAAGAGCGGAAGATCTCCTCGAAGGC
ACGCTGGCGGTAGAGGCCTCGGTCCTGCGGTACATGAAGGACCACCGCCT
CTACGGCTTCGGCCGGCAGTCGCGGCTGGAGAAGGTGCTCATGGCGGCGT
CAGAACGGTTCTCGTCGGTCTTCTCGGAGGAGCGGCGGTGGATGGTCATC
GCGGGCACGGCAGCTGTCGTGGTGACCGTCGGAGTGTTGCGGGTTGTCAG
CCGATTTCGGGACGGCGGCATTCGAGAGGGAAGAGCCCGCTCGGCTCCCT
AACTCCTCGAAGGCACGCTGGCGGTAGAGGCCTCGGTCCTGCGGTACATG
AAGGACCACCGCCTCTACGGCTTCGGCCGGCAGTCGCGGCTGGAGAAGGT
GCTCATGGCGGCGTCAGAACGGTTCTCGTCGGTCTTCTCGGAGGAGCGGC
GGTGGATGGTCATCGCGGGCACGGCAGCTGTCGTGGTGACCGTCGGAGTG
TTGCGGGTTGTCAGCCGATTTCGGGACGGCGGCATTCGAGAGGGAAGAGC
CCGCTCGGCTCCCTAA
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