mRNA_E-siliculosus-1a_M_contig92.17275.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17275.1 vs. uniprot
Match: D7FKY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKY8_ECTSI) HSP 1 Score: 1112 bits (2876), Expect = 0.000e+0 Identity = 1130/1635 (69.11%), Postives = 1157/1635 (70.76%), Query Frame = 1
Query: 1 MMLNVSATLSPSRNKDTRTQVREQLEKEHAGVSPSTMKKQLRAVYSPLSGSKNAPQGDTIK-TLLDMYADVGTPIGRFSLESGFGFDFSPSSGANHSVQSAI-TVDSPATAGSSSSVVGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AACSALLAISDM-LDDVPPTLVVSPLPLDGGNNGFGGGSDFWETSVIRELRDGPIFSTGGHNFNTXXXXXXXXXXXXXXX--PPFSGCYSAHDIDGNXXXXXXXXXXXXXXXX-QWQEDEEDQVPMSTLEVIIDQVLKKAKTEMMTGVTRVVEDVLANLSGDIHLELTKMKSASGLKHGAVGPMDPVPPLTPPSPRSAT-LPPRTPPAGISSLLLRSPASRISLASAARGSVDPAFSSPFVAPAAMAAATAADGSFSGGAQSTDFAAVAXXXAETVFLSAAGVFGDDDDGDSATPTASATXXXXXAGVTATVADEPIGVAPVPVSAGHDQALSVATTAATISAPTPLHSTTAIVTNLLVAATNSPRPVMPIDLSSPATGNKSVDASATGTTGVRGLSPSDEILSTPTDACCGANNPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLTTXPTPSAAPTSDAPAICPTPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGARSPCTSAVPPVLPSPGSAPKEIIERERTTDSGSNTVAVPCHLADTPTDSTAPTVDASTICPAXXXXXXXXXXXX----GTCPAPKSTVPLLAGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLA--GTTPTATXXASAAPAAXXXXXXXXXXXXXXXXXXXXXXXXAAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA-----------------------GTSPAPKSXXXXXXXXXXXXTAAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXASAAPAAAAVXXXXXXXXXXXXXXXXXXXXXXXXAAAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVAVAVXXXXXXXXXXXXXXXXXXXXXXXXX---VVGARSPSTSAVPPVMPSPRSASKGIIERERRAGSASCTTTPSEKE---KQRPPMRFHDAAIAMASPARPLPGYAHAVEKGRFQSTEA-----------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVSPMPSGSSPVHTVSAASVRQRRSAGADRAAAVAAVFGAGSPLRRGGVLEMVASVGAPGVFSGTAAGPVFLRGSQPGSSSLDEVADAPAAAXXXXVSGSA----NAGTRLPLAARLLSGVSGVASPSRVGGVGPGAARSPFGSVLLNKASSASARASGASAASSSSPVGRPAGFTLDKENPATSGSHAKGGAE-RLSTVRRTPAGGGKTMSMLAQAAEARKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-TCASTRSVRTRSVLAASSRASVEPPTKEGPAPATTASATRRSARIAAGLAKSCAKKSIDGIGRRSSSSRDGAPSSAKDKPRWR 4689
MMLNVSATLSPSR KDTRTQVREQLEKEHAGVSP +K QLRAVYSPLSGSKNAPQGDT+K TLLDMYADVGTPIGRFSLESG GFDFSPSSGANHSVQSAI TVDSPATAGSSSSV XXXXXXXXXXXXXXXX AACSALLAIS++ LDDVPPTL VSPLPL+GGNNGFGG SDFWETSVIRELRDGP F TGG NFNT XXXXXXXXXXXXXX PPFSGC+SA IDGN XXXXXXXXXXXXXXX QW EDEEDQVPMS EVIIDQVLKKAKT+MMTGVTRVVEDVL NLSGDIHLELTK KSASGLKHGA G MDPVPP TPP PRSAT L PRTPPAG+SSLLLRS S+ISLASAA GSVDP+ + PF SFSG QS D AAVA AE + LSAAGVFGDDD GDSATP XXXXX GVTATVADEPIGVAPVPVSAG DQALSVATTAAT+SAPTP HS TA VTNLL AAT SP PVMPIDLSSP TGN+SV ASATGTTGV LS S+EILS PTDACCGAN XXXXXXXXXXXXXXXXXXXXXX NLTT PTPSAAPTSDAPAICPTP+PG +VG SP T VPPVLPSPGS PK IIERE D N++AV + A TPT S APTV A I PA XXXXX G P P T PLLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G+ P + A A AA XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTSPAPKS P A XXXXXXXXXXXXXXXXXXXXX A P XXXXXXXXXXXXXXXXXXXXXX A A XXXXXXXXXXXXXXXXXXXX AAAVAVAVXXXXXXXXXXXXXXXXXXXXXXXXX VVG RSPSTSAVPP MPSP SA KGIIERERRA KQRPPMRFH AA AMASPARPLPGYA+AVEKGR QS EA XXXXXXXXXGAVSPMPSGSSPVH VSAASVRQRRSAGADRAAAVAAVFGAGSPLRRGGVLEMVASVGAPGV GTAAGP FLRGSQ GSSSLDEVADAPA XXXX NAGTRLPL AR LSGVSGVASPSRVGGVGPGAARSPFGSVLLNKA+ SARASGA+AASSSSPVGRPAGFTLDKENPAT GSHAKGGAE RLSTVRRTPAGGGKTMSMLAQAAE XXXXXXXXXXXXXXXXXXXXXXXXXXXX TCASTRSVRTRSVLAAS+RASVEP TK PAPATTA TRRSARIAAGLAKSCAKKSIDGIGRRSS SRDGAPSSAKDKPRWR
Sbjct: 1 MMLNVSATLSPSRKKDTRTQVREQLEKEHAGVSPC-IKNQLRAVYSPLSGSKNAPQGDTVKKTLLDMYADVGTPIGRFSLESGLGFDFSPSSGANHSVQSAIITVDSPATAGSSSSVXXXXXXXXXXXXXXXXXXXXEGPTSVPSPPLPSSGAVAVTDDDKAACSALLAISNIILDDVPPTLAVSPLPLNGGNNGFGG-SDFWETSVIRELRDGPTFGTGGPNFNTTXXXXXXXXXXXXXXXXPPFSGCFSAPGIDGNNXXXXXXXXXXXXXXXXQWLEDEEDQVPMSAFEVIIDQVLKKAKTQMMTGVTRVVEDVLVNLSGDIHLELTKWKSASGLKHGATGAMDPVPPFTPPPPRSATTLLPRTPPAGLSSLLLRSTGSQISLASAAHGSVDPSSAPPFXXXXXXXXXXXXXXSFSGSLQSLDLAAVAAAAAEAICLSAAGVFGDDD-GDSATPXXXXXXXXXXXGVTATVADEPIGVAPVPVSAGDDQALSVATTAATMSAPTPFHSATATVTNLLSAATTSPPPVMPIDLSSPVTGNESVGASATGTTGVPDLSRSEEILSPPTDACCGANXXXXXXXXXXXXXXXXXXXXXXXXXPSGVLAAARNLTTTPTPSAAPTSDAPAICPTPSPGGIAIAAGTSPPPASTVPLLAGTTAAVTTSAGV-IVGVESPSTPVVPPVLPSPGSTPKGIIERELKVDIALNSIAVR-NSATTPTRSAAPTVGAPAIYPAPPPSGTAXXXXXXXXAGISPTPVFTHPLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMPSPGSAPKGIIEHAPATCPAPSPDGIAAAAAAGTSPAPKSTVPLAGTAATMTTTATXXXXXXXXXXXXXXLLAGTTPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXGTSPAPKS-------------TVPLAGTAAXXXXXXXXXXXXXXXXXXXXXLLAGTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDGAGAXXXXXXXXXXXXXXXXXXXXXX------------------------------AAAVAVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGVRSPSTSAVPPFMPSPGSAPKGIIERERRAXXXXXXXXXXXXXXXXKQRPPMRFHAAATAMASPARPLPGYANAVEKGRLQSAEAXXXXXXXXXXXXXXXXXPLKPSSTNVQETPARKASTDKGTAAVPARSGGAAASRVGTSPPPTGAGTKTXXXXXXXXXGAVSPMPSGSSPVHAVSAASVRQRRSAGADRAAAVAAVFGAGSPLRRGGVLEMVASVGAPGVLGGTAAGPAFLRGSQLGSSSLDEVADAPAXXXXXXXXXXXXXXXNAGTRLPLGARRLSGVSGVASPSRVGGVGPGAARSPFGSVLLNKATYGSARASGAAAASSSSPVGRPAGFTLDKENPATGGSHAKGGAEERLSTVRRTPAGGGKTMSMLAQAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCASTRSVRTRSVLAASNRASVEPSTKGAPAPATTAPTTRRSARIAAGLAKSCAKKSIDGIGRRSSWSRDGAPSSAKDKPRWR 1587
BLAST of mRNA_E-siliculosus-1a_M_contig92.17275.1 vs. uniprot
Match: A0A6H5L0X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X2_9PHAE) HSP 1 Score: 506 bits (1303), Expect = 9.500e-156 Identity = 558/1124 (49.64%), Postives = 588/1124 (52.31%), Query Frame = 1
Query: 1012 MDPVPPLTPPSPRSATLPPRTPPAGISSLLLRSPASRISLASAARGSVDPAFSSPFVAPAAMAAATAADGSFSGGAQSTDFAAVAXXXAETVFLSAAGVFGDDDDGDSATPTASATXXXXXAGVTATVADEPIGVAPVPVSAGHDQALSVATTAATISAPTPLHSTTAIVTNLLVAATNSPRPVMPIDLSSPATGNKSVDASATGTTGVRGLSPSDEILSTPTDACCGANNPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLTTXPTPSAAPTSDAPAICPTPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGARSPCTSAVPPVLPSPGSAPKEIIERERTTDSGSNTVAVPCHLADTPTDSTAPTVDASTICPAXXXXXXXXXXXX------GTCPAPKSTVPLLAGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGTTPTATXXASAAPAAXXXXXXXXXXXXXXXXXXXXXXXXAAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGTSPAPKSXXXXXXXXXXXXTAAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXASAAPAAAAVXXXXXXXXXXXXXXXXXXXXXXXXAAAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVAVAVXXXXXXXXXXXXXXXXXXXXXXXXXVVGARSPSTSAVPPVMPSPRSASKGIIERERRAGSASCTTTPSEKEK---QRPPMRFHDAAIAMASPARPLPGYAHAVEKGRFQSTEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------GAVSPMPSGSSPVHTVSAASVRQRRSAGADRAAAVAAVFGAGSPLRRGGVLEMVASVGAPGVFSGTAAGPVFLRGSQPGSSSLDEVADAPAAAXXXXVSGSANAGTRLPLAARLLSGVSGVASPSRVGGVGPGAARSPFGSVLLNKASSASARASGASAASSSSPVGRPAGFTLDKENPATSGSHAKGGAE-RLSTVRR 4290
MDPV PLTPP PRSATL ISSLLLRSPAS++SLASAARGSVDPAF+SP A AAM D SFSGGAQSTDFAAVA AET+F SA GV GDDD GDSATPTASAT XXX GVTATVADEPIGVAPVPVSAGHDQALSVATTAAT+SAPTPL +TAIVTNLL AAT SP P+MPIDLSSP T N+SV ASATGTTGV LS +E+LS PTDACC N+PD XXXXXXXXXXXXXX NLTT PTPSAAP SDAPAICPTP+PG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VGA SP T AVP VLPSPGS PK IIERE D+ N +AV + A T TDS APTVDA I PA XXXXXXXXXX G P P TVPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VV ARSPST A+ PV+PSPRSA KGIIE ER+AGSAS T Q+PPMRFHDAA AMASPARPLPGYA+AV+KGRFQS A XXXXXXX XXXXXXXX GAVSP+PS SSPVHTVSAASV QRRSAGAD AAAVAAVFGA SPLRRGGVLEMVASVGAPGV SGTAA P FL+GSQPGSSSLDEVADAP A R LSG PGAARSPFGS+LLN+A+S+SARASGA+AAS+SSPVGRPAGFTLDKENPAT GSHA+ GAE RLSTVRR
Sbjct: 1 MDPVAPLTPPPPRSATLXXXXXXXVISSLLLRSPASQMSLASAARGSVDPAFASPLAASAAMXXXXXXDESFSGGAQSTDFAAVAAAAAETIFRSATGVLGDDD-GDSATPTASATTPXXXTGVTATVADEPIGVAPVPVSAGHDQALSVATTAATMSAPTPLPLSTAIVTNLLAAATTSPPPMMPIDLSSPVTSNESVGASATGTTGVPDLSRREEVLSPPTDACCEPNHPDDAVASPMTSXXXXXXXXXXXXXXSGVLAAARNLTTTPTPSAAPISDAPAICPTPSPGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAMSPSTPAVPLVLPSPGSTPKGIIERELKVDNALNPIAVR-NSATTLTDSAAPTVDAPAIYPAPPXXXXXXXXXXXXXXXAGISPTPVFTVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVDARSPSTPAITPVLPSPRSAPKGIIECERKAGSASNTXXXXXXXXXXXQKPPMRFHDAATAMASPARPLPGYANAVKKGRFQSAGATAVAATDAXXXXXXXPLKPSSTKVQETPARRTSTDKGTATVPAGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVSPIPSRSSPVHTVSAASVGQRRSAGADCAAAVAAVFGARSPLRRGGVLEMVASVGAPGVLSGTAASPAFLQGSQPGSSSLDEVADAPGA--------------------RRLSGXXXXXXXXXXXXXNPGAARSPFGSILLNRATSSSARASGAAAASASSPVGRPAGFTLDKENPATGGSHAEEGAEKRLSTVRR 801 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig92.17275.1 >prot_E-siliculosus-1a_M_contig92.17275.1 ID=prot_E-siliculosus-1a_M_contig92.17275.1|Name=mRNA_E-siliculosus-1a_M_contig92.17275.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1564bp MMLNVSATLSPSRNKDTRTQVREQLEKEHAGVSPSTMKKQLRAVYSPLSGback to top mRNA from alignment at E-siliculosus-1a_M_contig92:286488..294685+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig92.17275.1 ID=mRNA_E-siliculosus-1a_M_contig92.17275.1|Name=mRNA_E-siliculosus-1a_M_contig92.17275.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8198bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:286488..294685+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:286488..294685+ >mRNA_E-siliculosus-1a_M_contig92.17275.1 ID=mRNA_E-siliculosus-1a_M_contig92.17275.1|Name=mRNA_E-siliculosus-1a_M_contig92.17275.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=9384bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:286488..294685+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |