mRNA_E-siliculosus-1a_M_contig92.17272.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17272.1 vs. uniprot
Match: A0A6H5KZM3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZM3_9PHAE) HSP 1 Score: 1047 bits (2708), Expect = 0.000e+0 Identity = 644/716 (89.94%), Postives = 659/716 (92.04%), Query Frame = 1
Query: 304 MTGTKMAAGAVTAVVAEDATISAQNVGEESGGRAHDADALPPTPCVAAIRENNTISATEEGVMVPVTTDSTDSAGHALDGNSLGQRQSASHGDPIRADGNSGSVHLAPRHPSSPPAEPRLAPKPGHTWKPSTADGHGVTRTSRKARGKSAAIPTSSGDFADSLLRLCPALEARISDLRRDNTAAARFLSKARATASEKARRPVGTLVSRNRAVCALEGAELSLLRREETATRAQRKREANRXXXXXLERRRLATAEATRIKHEGPSLAEVRALEEATLLEKRQRFFMFAVVAIHSAIRWRNEWKERKWKMAKFAEALAGLTEQKESEDVFEASVSRVQRFVRRRQGGPGVAGGAAAAAGDRSGRRNFIRCLKAWIPRAHGTWKRRRREGGVIIYDFLKDARLSQNIKAIYRFRRKVMRCQVYVKGVSVVTRDRLLLLGLFFSRCEGRLRGXXXXXXXXXVQEEAAADLEVHRQLMRPSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEDDGVSELMETVAALRLKSAQEELEMRSARPDVKRRLLEGLLGKVRAAHQSRMQLSSGGRGGDGXXXXXXXRKGRGPGRNRRGVSLPEALFTVDDARELLTRSPPXXXXXXXXXXXXXAGGGLTKGKQASPNGSGELPGAPYSTVAVSRPGTGXXXXXXXXXXSKSDFRPNTRVPPMLLLKSVPEAVMCQLVLTAWEQSSSSGRR 2445
MTGTK+AAGAVTAVV ED TISAQNVGEESGGRAHDADALPPTPC+AAIRE +TISATE GVMVP TTDS A HALDGNSLGQRQSASHGDP+R DGNSGS H AP HPSS PA PRLAPKPGHTWKPSTADGHGV+RT RKA+G SAAIPTSSGD ADSLLRLCPALEARISDLRRDNTAAARFLSKA+ATASEKARRPVG LVSRNRAVCALEGAELSLLRREE TRAQRKREAN XXXXX ERRRLATAEATRIKHEGPSLAEVRALEEA LLEKRQR+F+FAVVAIHSAIRWRN+WKERK+KMAKFAEAL GL EQKES+DVFEASV+RVQRFVRRRQG PGVAGGAAA AGDRSGRRNFIRCLKAWIPRAHGTWKRRRREGGVIIYDFLKDARLSQNIKAIYRFRRKVMRCQVYVKGVSVVTRDRLLLLGLFFS+CEGRLRG VQEEAAADLEVHRQLMRPSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXX GEDDGVSELMETVAALRLKSAQEELEMRSARPDVKRRLLEGLLGKVRAAHQSRMQLSSGGRGGD XXXX R G+GPGRNRRGV LPEALFTVDDARELLTRSP XXXXXXXXXXXXX G LT G QASPNGSGELPGAPYSTVAVSRPGTG XXXXX SKSDFRPNTRVPPMLLLKSVPEAVMCQLVLTAWEQSSSSG R
Sbjct: 1 MTGTKLAAGAVTAVVTEDKTISAQNVGEESGGRAHDADALPPTPCLAAIREKDTISATEAGVMVPGTTDS---AEHALDGNSLGQRQSASHGDPVRVDGNSGSAHHAPHHPSSSPAGPRLAPKPGHTWKPSTADGHGVSRT-RKAQGNSAAIPTSSGDLADSLLRLCPALEARISDLRRDNTAAARFLSKAQATASEKARRPVGALVSRNRAVCALEGAELSLLRREEATTRAQRKREANXXXXXXXERRRLATAEATRIKHEGPSLAEVRALEEAALLEKRQRYFLFAVVAIHSAIRWRNDWKERKYKMAKFAEALVGLIEQKESQDVFEASVARVQRFVRRRQGAPGVAGGAAATAGDRSGRRNFIRCLKAWIPRAHGTWKRRRREGGVIIYDFLKDARLSQNIKAIYRFRRKVMRCQVYVKGVSVVTRDRLLLLGLFFSQCEGRLRGRLAERVRQQVQEEAAADLEVHRQLMRPSTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGEDDGVSELMETVAALRLKSAQEELEMRSARPDVKRRLLEGLLGKVRAAHQSRMQLSSGGRGGDXXXXXGDARIGKGPGRNRRGVFLPEALFTVDDARELLTRSPXXXXXXXXXXXXXXXXG-LTNGNQASPNGSGELPGAPYSTVAVSRPGTGGXXXXXV---SKSDFRPNTRVPPMLLLKSVPEAVMCQLVLTAWEQSSSSGWR 708 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig92.17272.1 >prot_E-siliculosus-1a_M_contig92.17272.1 ID=prot_E-siliculosus-1a_M_contig92.17272.1|Name=mRNA_E-siliculosus-1a_M_contig92.17272.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=816bp MTITLVGSSRELKNRSRSFLPPIDLLELLVDGDGPATVKPPGTVRGKTLPback to top mRNA from alignment at E-siliculosus-1a_M_contig92:247401..255332+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig92.17272.1 ID=mRNA_E-siliculosus-1a_M_contig92.17272.1|Name=mRNA_E-siliculosus-1a_M_contig92.17272.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7932bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:247401..255332+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:247401..255332+ >mRNA_E-siliculosus-1a_M_contig92.17272.1 ID=mRNA_E-siliculosus-1a_M_contig92.17272.1|Name=mRNA_E-siliculosus-1a_M_contig92.17272.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4896bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:247401..255332+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |