mRNA_E-siliculosus-1a_M_contig92.17264.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: D7FRA7_ECTSI (PRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA7_ECTSI) HSP 1 Score: 601 bits (1549), Expect = 7.420e-217 Identity = 303/309 (98.06%), Postives = 307/309 (99.35%), Query Frame = 1
Query: 1 MALLDALAALEAQTGVSEMPPLESSHVDRIKQAVEAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKLTRGEPQPVPQEL 927
MAL DALAALEAQTGVSEMPPLESSHVDR+KQA+EAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQ+LCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSR+SSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKL RGEPQPVPQEL
Sbjct: 1 MALSDALAALEAQTGVSEMPPLESSHVDRMKQAIEAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQILCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRESSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKLARGEPQPVPQEL 309
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A7S2W294_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W294_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.360e-26 Identity = 81/218 (37.16%), Postives = 125/218 (57.34%), Query Frame = 1
Query: 250 LVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKE--SIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISR-SVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKK----RAD------LVLVVQPTSDRQL 864
LVG+CG +GKS LA +L G + ++ + MDA+ + NA L E+ + +D+KG P+T+D + + L L+ SK+ +I LP Y R++HDP+P++ + +VVLV+G+HL W + A L IFL + S+CF RV+ RKVANG SR+++E H+ RVD P D++ + K RAD + +VV+P+S R L
Sbjct: 128 LVGICGCPGSGKSVLANVLEKLCG-----TRVKSIGMDAFHFTNAKLH-EINK--------RDVKGSPETIDVDAFVATLEALKQKSKKCPNISLPVYDRNIHDPIPNADEIGDQVKVVLVDGIHLFCDGPPWARVPALLDGWIFLTHTNPSLCFSRVIERKVANGVSREAAEMHYKRVDLPNCDKINAQIKKALSRADNWPKLVMQVVVRPSSVRTL 331
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: UPI001B313417 (nucleoside/nucleotide kinase family protein n=1 Tax=Naasia sp. SYSU D00057 TaxID=2817380 RepID=UPI001B313417) HSP 1 Score: 105 bits (263), Expect = 1.680e-23 Identity = 79/221 (35.75%), Postives = 115/221 (52.04%), Query Frame = 1
Query: 172 LAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
+A VI P L + +G GERVL+G+ G+ AAGKSTLA+ L A AS+ V MD + HLA + LGR + KG T D L L RLR + ++ PA+ RDL P+ +S+ VAPD RVV+ EG +LL W E+ L F ++ +++ +R+V R + G++ D++ D VD P + + RADLV+
Sbjct: 1 MAAVIAPAARALLDRVRTLAGGGERVLLGITGAPAAGKSTLAEWLVEALDAEGVASA--WVPMDGF-----HLADAALDRLGR----RHRKGALDTFDGHGYLALLRRLRAETSNTVYAPAFERDLEQPIANSIPVAPDARVVITEGNYLLADPEPWPEVRRELTEVWFTEVDQTLRRERLVARHIRFGKAPDAAVVWADTVDEPNARLIAATRGRADLVV 210
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A1A3IEE7_9MYCO (Nucleoside/nucleotide kinase family protein n=2 Tax=Mycobacterium sp. 1423905.2 TaxID=1856859 RepID=A0A1A3IEE7_9MYCO) HSP 1 Score: 104 bits (260), Expect = 2.140e-23 Identity = 63/185 (34.05%), Postives = 100/185 (54.05%), Query Frame = 1
Query: 241 ERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWD 795
ER+++GL G +GKSTLA +L S++ + MD + N L RA + IKG +T D L L R+R P +++ +P Y RDLH+PV S+ + P+ +V++EG +LL G W+E+SA + + FLD+ +VC R+V R +A G++ ++ DR D +D
Sbjct: 10 ERIIIGLAGPPGSGKSTLASVLVDEINAGEHHSAV-VMPMDGFHLSNRQL---------RAKGIAPIKGARETFDVDGFLAALARIRKPGPQTVYVPDYRRDLHEPVAASIAITPETNIVVLEGNYLLLGCGPWREVSAYVDQPWFLDVDWNVCRQRLVARHIATGKASAAASEWVDRSDKANYD 184
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A3N1HR76_9ACTN (Uncharacterized protein n=1 Tax=Pseudokineococcus lusitanus TaxID=763993 RepID=A0A3N1HR76_9ACTN) HSP 1 Score: 98.2 bits (243), Expect = 1.720e-20 Identity = 73/206 (35.44%), Postives = 105/206 (50.97%), Query Frame = 1
Query: 238 GERVLVGLCGSAAAGKSTLAQLLCAAY-------GIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
G RVLVG+ G+ AAGK+TLAQ L AA G + G +++Q V MD + HLA E LG L+D KG P T D + L RLR ++ + PA+ RDL + +V V R+V+ EG +LL +EG W L ++D +R++ R V G+SR+ + + VD P ++RADLV+
Sbjct: 43 GGRVLVGVAGAPAAGKTTLAQALVAAADARLRGTGTVEGPAAVQ-VPMDGF-----HLADVELERLG----LRDRKGTPPTFDAGGYVALLRRLRAADEDVVYAPAFERDLEQALAGAVPVPAGARLVVTEGNYLLLEEGPWSACGELLDEVWYVDAEEGAREERLLARHVEFGKSREEATAWMAAVDDPDAALAAGSRERADLVV 238
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A6F8YQB7_9ACTN (PRK domain-containing protein n=1 Tax=Phytohabitans suffuscus TaxID=624315 RepID=A0A6F8YQB7_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 5.260e-20 Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 1
Query: 223 GPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
G + GERV++G+ G AAGKSTLA+LL G +++ V MD + HLA + LGR + KG T D L L RLRT + ++ P + R L P+ S+ V PD RVV+ EG +LL W E+ A L T F+++ +R++ R V G++ D + VD P + + RADLV+
Sbjct: 61 GAAHRGERVVLGIAGCPAAGKSTLAELLVRGLGAAGVPAAL--VPMDGF-----HLADAALDRLGR----RGRKGAIDTFDADGYLALLRRLRTDRRRTVWAPGFERHLEQPIAGSIGVDPDVRVVVTEGNYLLAGAEPWPEVRAELTETWFVELDEPSRRERLIARHVEFGKTPDEAVRWVSTVDDPNARLIAATRDRADLVV 253
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A8J3YL85_9ACTN (Nucleoside/nucleotide kinase family protein n=1 Tax=Virgisporangium aliadipatigenens TaxID=741659 RepID=A0A8J3YL85_9ACTN) HSP 1 Score: 95.9 bits (237), Expect = 5.910e-20 Identity = 70/197 (35.53%), Postives = 101/197 (51.27%), Query Frame = 1
Query: 244 RVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
R+LVGLCG AAGKSTLA L AA G S++ V MD + NA LA LG L D KG P+T D + L RLR + + PA+ R +++ + ++ V PD RV+++EG +LL W + L T++LD + D +V R+ A G SR +++ D ++ + RAD VL
Sbjct: 24 RLLVGLCGPPAAGKSTLAAALAAALVNRDGVSAV-AVPMDGFHLANAELAR-----LG----LADRKGAPETFDAHGFVHLLQRLRDAGPDVVYAPAFDRVVNESIGSAIPVPPDIRVIVIEGNYLLLDSHPWDRVRDILDVTLYLDAPHDMRHDALVRRQQARGLSRSAAQDWAAGSDAANARIIESTRDRADRVL 210
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A8J4A2A5_9ACTN (Nucleoside/nucleotide kinase family protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4A2A5_9ACTN) HSP 1 Score: 94.4 bits (233), Expect = 2.210e-19 Identity = 66/198 (33.33%), Postives = 99/198 (50.00%), Query Frame = 1
Query: 244 RVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVLV 837
R++VGL G AAGKSTLA L AA G ++ V MD + NA L LG L D KG P+T D + L RLR ++ P ++R +++ + ++ VAPD RVV+ EG +LL W E+ L ++LD S +V R++ G SRD++ + D ++ + RAD +L+
Sbjct: 24 RLIVGLAGPPAAGKSTLATALAAALND--GGTAAVAVPMDGFHLANAEL-----NRLG----LADRKGAPETFDATGYVNLLRRLRAGEPSTVYAPTFNRQINESIGSAIPVAPDVRVVVTEGNYLLLDTPPWHEVRPLLDLALYLDAPHSTRHSALVRRQLTRGLSRDAAHAWAGGSDAANAKLIESTRDRADEILI 210
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: UPI001F2AFBD8 (nucleoside triphosphate hydrolase n=3 Tax=Halomonadaceae TaxID=28256 RepID=UPI001F2AFBD8) HSP 1 Score: 94.4 bits (233), Expect = 2.990e-19 Identity = 64/173 (36.99%), Postives = 91/173 (52.60%), Query Frame = 1
Query: 238 GERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSS 756
G R LV + G AAGKSTL++ LC + + V MD Y + NA L + GR DIKG P+T D A L RDL RLR + +P + R L + +AP+ R+VLVEG +LL E W+E+ + RT+F+D+ +V DR++ R G+ D +
Sbjct: 32 GRRTLVAIAGPPAAGKSTLSERLCERIDAL-NPGIVALVPMDGYHFDNAVLIPQ-----GRL----DIKGAPETFDVAGLTRDLERLRR-DDGPVAVPVFDRPLDLARAGARLIAPEHRLVLVEGNYLLLDESPWRELRSFFDRTLFIDVPDAVLVDRLIRRWRGMGQDADGA 193
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A1Q9JU13_9FIRM (Nucleoside/nucleotide kinase family protein n=2 Tax=Anaerostipes TaxID=207244 RepID=A0A1Q9JU13_9FIRM) HSP 1 Score: 93.6 bits (231), Expect = 8.600e-19 Identity = 66/232 (28.45%), Postives = 113/232 (48.71%), Query Frame = 1
Query: 160 NEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSD 855
N+ + V LPL L+ +T+ + R++V L A GK+TL Q L + +Q + +D + Y + ++ + LG+ +K +KG P+T D L + ++T ++I P Y R++HD V D + V D ++L+EG LL E WK I TI + +R++GRK+ G SR+ +E+ + D ++ E+ DL+L V+ D
Sbjct: 21 NQETIENVFLPL---LQKLTKIQKEKDSRIVVFLAAPPAVGKTTLCQFL-EYLSQKEDVTEVQALGLDGFHYHSDYINSHDAVVLGKTVPMKTVKGCPETYDTDKLQEKVKSIKT---QNILWPIYDRNIHDVVEDVIEVTKD--IILIEGNWLLLSEEPWKSIKDVADYTILIRSKEETLKNRLIGRKMKGGLSREDAEAWYYNTDSVNVKRVLEDSLPGDLMLKVEDDGD 243 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig92.17264.1 >prot_E-siliculosus-1a_M_contig92.17264.1 ID=prot_E-siliculosus-1a_M_contig92.17264.1|Name=mRNA_E-siliculosus-1a_M_contig92.17264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=310bp MALLDALAALEAQTGVSEMPPLESSHVDRIKQAVEAAGGLPIERDCRKEIback to top mRNA from alignment at E-siliculosus-1a_M_contig92:176542..179503- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig92.17264.1 ID=mRNA_E-siliculosus-1a_M_contig92.17264.1|Name=mRNA_E-siliculosus-1a_M_contig92.17264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2962bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:176542..179503- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:176542..179503- >mRNA_E-siliculosus-1a_M_contig92.17264.1 ID=mRNA_E-siliculosus-1a_M_contig92.17264.1|Name=mRNA_E-siliculosus-1a_M_contig92.17264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1860bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:176542..179503- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |