mRNA_E-siliculosus-1a_M_contig92.17264.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17264.1
Unique NamemRNA_E-siliculosus-1a_M_contig92.17264.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: D7FRA7_ECTSI (PRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA7_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 7.420e-217
Identity = 303/309 (98.06%), Postives = 307/309 (99.35%), Query Frame = 1
Query:    1 MALLDALAALEAQTGVSEMPPLESSHVDRIKQAVEAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKLTRGEPQPVPQEL 927
            MAL DALAALEAQTGVSEMPPLESSHVDR+KQA+EAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQ+LCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSR+SSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKL RGEPQPVPQEL
Sbjct:    1 MALSDALAALEAQTGVSEMPPLESSHVDRMKQAIEAAGGLPIERDCRKEILGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQILCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRESSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKLARGEPQPVPQEL 309          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A7S2W294_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W294_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.360e-26
Identity = 81/218 (37.16%), Postives = 125/218 (57.34%), Query Frame = 1
Query:  250 LVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKE--SIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISR-SVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKK----RAD------LVLVVQPTSDRQL 864
            LVG+CG   +GKS LA +L    G     + ++ + MDA+ + NA L  E+ +        +D+KG P+T+D  + +  L  L+  SK+  +I LP Y R++HDP+P++  +    +VVLV+G+HL      W  + A L   IFL  +  S+CF RV+ RKVANG SR+++E H+ RVD P  D++  + K    RAD      + +VV+P+S R L
Sbjct:  128 LVGICGCPGSGKSVLANVLEKLCG-----TRVKSIGMDAFHFTNAKLH-EINK--------RDVKGSPETIDVDAFVATLEALKQKSKKCPNISLPVYDRNIHDPIPNADEIGDQVKVVLVDGIHLFCDGPPWARVPALLDGWIFLTHTNPSLCFSRVIERKVANGVSREAAEMHYKRVDLPNCDKINAQIKKALSRADNWPKLVMQVVVRPSSVRTL 331          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: UPI001B313417 (nucleoside/nucleotide kinase family protein n=1 Tax=Naasia sp. SYSU D00057 TaxID=2817380 RepID=UPI001B313417)

HSP 1 Score: 105 bits (263), Expect = 1.680e-23
Identity = 79/221 (35.75%), Postives = 115/221 (52.04%), Query Frame = 1
Query:  172 LAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
            +A VI P    L    +  +G GERVL+G+ G+ AAGKSTLA+ L  A      AS+   V MD +     HLA    + LGR    +  KG   T D    L  L RLR  +  ++  PA+ RDL  P+ +S+ VAPD RVV+ EG +LL     W E+   L    F ++ +++  +R+V R +  G++ D++    D VD P    +   + RADLV+
Sbjct:    1 MAAVIAPAARALLDRVRTLAGGGERVLLGITGAPAAGKSTLAEWLVEALDAEGVASA--WVPMDGF-----HLADAALDRLGR----RHRKGALDTFDGHGYLALLRRLRAETSNTVYAPAFERDLEQPIANSIPVAPDARVVITEGNYLLADPEPWPEVRRELTEVWFTEVDQTLRRERLVARHIRFGKAPDAAVVWADTVDEPNARLIAATRGRADLVV 210          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A1A3IEE7_9MYCO (Nucleoside/nucleotide kinase family protein n=2 Tax=Mycobacterium sp. 1423905.2 TaxID=1856859 RepID=A0A1A3IEE7_9MYCO)

HSP 1 Score: 104 bits (260), Expect = 2.140e-23
Identity = 63/185 (34.05%), Postives = 100/185 (54.05%), Query Frame = 1
Query:  241 ERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWD 795
            ER+++GL G   +GKSTLA +L          S++  + MD +   N  L         RA  +  IKG  +T D    L  L R+R P  +++ +P Y RDLH+PV  S+ + P+  +V++EG +LL   G W+E+SA + +  FLD+  +VC  R+V R +A G++  ++    DR D   +D
Sbjct:   10 ERIIIGLAGPPGSGKSTLASVLVDEINAGEHHSAV-VMPMDGFHLSNRQL---------RAKGIAPIKGARETFDVDGFLAALARIRKPGPQTVYVPDYRRDLHEPVAASIAITPETNIVVLEGNYLLLGCGPWREVSAYVDQPWFLDVDWNVCRQRLVARHIATGKASAAASEWVDRSDKANYD 184          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A3N1HR76_9ACTN (Uncharacterized protein n=1 Tax=Pseudokineococcus lusitanus TaxID=763993 RepID=A0A3N1HR76_9ACTN)

HSP 1 Score: 98.2 bits (243), Expect = 1.720e-20
Identity = 73/206 (35.44%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  238 GERVLVGLCGSAAAGKSTLAQLLCAAY-------GIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
            G RVLVG+ G+ AAGK+TLAQ L AA        G + G +++Q V MD +     HLA    E LG    L+D KG P T D    +  L RLR   ++ +  PA+ RDL   +  +V V    R+V+ EG +LL +EG W      L    ++D       +R++ R V  G+SR+ + +    VD P        ++RADLV+
Sbjct:   43 GGRVLVGVAGAPAAGKTTLAQALVAAADARLRGTGTVEGPAAVQ-VPMDGF-----HLADVELERLG----LRDRKGTPPTFDAGGYVALLRRLRAADEDVVYAPAFERDLEQALAGAVPVPAGARLVVTEGNYLLLEEGPWSACGELLDEVWYVDAEEGAREERLLARHVEFGKSREEATAWMAAVDDPDAALAAGSRERADLVV 238          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A6F8YQB7_9ACTN (PRK domain-containing protein n=1 Tax=Phytohabitans suffuscus TaxID=624315 RepID=A0A6F8YQB7_9ACTN)

HSP 1 Score: 97.4 bits (241), Expect = 5.260e-20
Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 1
Query:  223 GPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
            G +  GERV++G+ G  AAGKSTLA+LL    G     +++  V MD +     HLA    + LGR    +  KG   T D    L  L RLRT  + ++  P + R L  P+  S+ V PD RVV+ EG +LL     W E+ A L  T F+++      +R++ R V  G++ D +      VD P    +   + RADLV+
Sbjct:   61 GAAHRGERVVLGIAGCPAAGKSTLAELLVRGLGAAGVPAAL--VPMDGF-----HLADAALDRLGR----RGRKGAIDTFDADGYLALLRRLRTDRRRTVWAPGFERHLEQPIAGSIGVDPDVRVVVTEGNYLLAGAEPWPEVRAELTETWFVELDEPSRRERLIARHVEFGKTPDEAVRWVSTVDDPNARLIAATRDRADLVV 253          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A8J3YL85_9ACTN (Nucleoside/nucleotide kinase family protein n=1 Tax=Virgisporangium aliadipatigenens TaxID=741659 RepID=A0A8J3YL85_9ACTN)

HSP 1 Score: 95.9 bits (237), Expect = 5.910e-20
Identity = 70/197 (35.53%), Postives = 101/197 (51.27%), Query Frame = 1
Query:  244 RVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVL 834
            R+LVGLCG  AAGKSTLA  L AA     G S++  V MD +   NA LA      LG    L D KG P+T D    +  L RLR    + +  PA+ R +++ +  ++ V PD RV+++EG +LL     W  +   L  T++LD    +  D +V R+ A G SR +++      D      ++  + RAD VL
Sbjct:   24 RLLVGLCGPPAAGKSTLAAALAAALVNRDGVSAV-AVPMDGFHLANAELAR-----LG----LADRKGAPETFDAHGFVHLLQRLRDAGPDVVYAPAFDRVVNESIGSAIPVPPDIRVIVIEGNYLLLDSHPWDRVRDILDVTLYLDAPHDMRHDALVRRQQARGLSRSAAQDWAAGSDAANARIIESTRDRADRVL 210          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A8J4A2A5_9ACTN (Nucleoside/nucleotide kinase family protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4A2A5_9ACTN)

HSP 1 Score: 94.4 bits (233), Expect = 2.210e-19
Identity = 66/198 (33.33%), Postives = 99/198 (50.00%), Query Frame = 1
Query:  244 RVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVLV 837
            R++VGL G  AAGKSTLA  L AA     G ++   V MD +   NA L       LG    L D KG P+T D    +  L RLR     ++  P ++R +++ +  ++ VAPD RVV+ EG +LL     W E+   L   ++LD   S     +V R++  G SRD++ +     D      ++  + RAD +L+
Sbjct:   24 RLIVGLAGPPAAGKSTLATALAAALND--GGTAAVAVPMDGFHLANAEL-----NRLG----LADRKGAPETFDATGYVNLLRRLRAGEPSTVYAPTFNRQINESIGSAIPVAPDVRVVVTEGNYLLLDTPPWHEVRPLLDLALYLDAPHSTRHSALVRRQLTRGLSRDAAHAWAGGSDAANAKLIESTRDRADEILI 210          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: UPI001F2AFBD8 (nucleoside triphosphate hydrolase n=3 Tax=Halomonadaceae TaxID=28256 RepID=UPI001F2AFBD8)

HSP 1 Score: 94.4 bits (233), Expect = 2.990e-19
Identity = 64/173 (36.99%), Postives = 91/173 (52.60%), Query Frame = 1
Query:  238 GERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSS 756
            G R LV + G  AAGKSTL++ LC     +     +  V MD Y + NA L  +     GR     DIKG P+T D A L RDL RLR      + +P + R L      +  +AP+ R+VLVEG +LL  E  W+E+ +   RT+F+D+  +V  DR++ R    G+  D +
Sbjct:   32 GRRTLVAIAGPPAAGKSTLSERLCERIDAL-NPGIVALVPMDGYHFDNAVLIPQ-----GRL----DIKGAPETFDVAGLTRDLERLRR-DDGPVAVPVFDRPLDLARAGARLIAPEHRLVLVEGNYLLLDESPWRELRSFFDRTLFIDVPDAVLVDRLIRRWRGMGQDADGA 193          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Match: A0A1Q9JU13_9FIRM (Nucleoside/nucleotide kinase family protein n=2 Tax=Anaerostipes TaxID=207244 RepID=A0A1Q9JU13_9FIRM)

HSP 1 Score: 93.6 bits (231), Expect = 8.600e-19
Identity = 66/232 (28.45%), Postives = 113/232 (48.71%), Query Frame = 1
Query:  160 NEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQLLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGLPKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVVLVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRDSSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSD 855
            N+  +  V LPL   L+ +T+    +  R++V L    A GK+TL Q L          + +Q + +D + Y + ++ +     LG+   +K +KG P+T D   L   +  ++T   ++I  P Y R++HD V D + V  D  ++L+EG  LL  E  WK I      TI +        +R++GRK+  G SR+ +E+ +   D     ++ E+    DL+L V+   D
Sbjct:   21 NQETIENVFLPL---LQKLTKIQKEKDSRIVVFLAAPPAVGKTTLCQFL-EYLSQKEDVTEVQALGLDGFHYHSDYINSHDAVVLGKTVPMKTVKGCPETYDTDKLQEKVKSIKT---QNILWPIYDRNIHDVVEDVIEVTKD--IILIEGNWLLLSEEPWKSIKDVADYTILIRSKEETLKNRLIGRKMKGGLSREDAEAWYYNTDSVNVKRVLEDSLPGDLMLKVEDDGD 243          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA7_ECTSI7.420e-21798.06PRK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2W294_9STRA1.360e-2637.16Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
UPI001B3134171.680e-2335.75nucleoside/nucleotide kinase family protein n=1 Ta... [more]
A0A1A3IEE7_9MYCO2.140e-2334.05Nucleoside/nucleotide kinase family protein n=2 Ta... [more]
A0A3N1HR76_9ACTN1.720e-2035.44Uncharacterized protein n=1 Tax=Pseudokineococcus ... [more]
A0A6F8YQB7_9ACTN5.260e-2034.80PRK domain-containing protein n=1 Tax=Phytohabitan... [more]
A0A8J3YL85_9ACTN5.910e-2035.53Nucleoside/nucleotide kinase family protein n=1 Ta... [more]
A0A8J4A2A5_9ACTN2.210e-1933.33Nucleoside/nucleotide kinase family protein n=1 Ta... [more]
UPI001F2AFBD82.990e-1936.99nucleoside triphosphate hydrolase n=3 Tax=Halomona... [more]
A0A1Q9JU13_9FIRM8.600e-1928.45Nucleoside/nucleotide kinase family protein n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:176542..179503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size930
Model size930
Exons3
Ec32 orthologEc-26_002450.1
Ec32 ortholog descriptionPhosphoribulokinase/uridine kinase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.H
EggNOG OGsCOG1072@1,KOG2702@2759
EggNOG free text desc.uridine kinase
Seed eggNOG ortholog2880.D7FRA7
Seed ortholog evalue2.8e-171
Seed ortholog score607.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17264.1prot_E-siliculosus-1a_M_contig92.17264.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig92 176542..179503 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936458.3376968-CDS-E-siliculosus-1a_M_contig92:176541..1768611622936458.3376968-CDS-E-siliculosus-1a_M_contig92:176541..176861Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 176542..176861 -
1696251088.1963894-CDS-E-siliculosus-1a_M_contig92:176541..1768611696251088.1963894-CDS-E-siliculosus-1a_M_contig92:176541..176861Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 176542..176861 -
1622936458.3542871-CDS-E-siliculosus-1a_M_contig92:177091..1774631622936458.3542871-CDS-E-siliculosus-1a_M_contig92:177091..177463Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 177092..177463 -
1696251088.2089458-CDS-E-siliculosus-1a_M_contig92:177091..1774631696251088.2089458-CDS-E-siliculosus-1a_M_contig92:177091..177463Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 177092..177463 -
1622936458.3774512-CDS-E-siliculosus-1a_M_contig92:179265..1795031622936458.3774512-CDS-E-siliculosus-1a_M_contig92:179265..179503Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 179266..179503 -
1696251088.220654-CDS-E-siliculosus-1a_M_contig92:179265..1795031696251088.220654-CDS-E-siliculosus-1a_M_contig92:179265..179503Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 179266..179503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig92.17264.1

>prot_E-siliculosus-1a_M_contig92.17264.1 ID=prot_E-siliculosus-1a_M_contig92.17264.1|Name=mRNA_E-siliculosus-1a_M_contig92.17264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=310bp
MALLDALAALEAQTGVSEMPPLESSHVDRIKQAVEAAGGLPIERDCRKEI
LGVNEADLAEVILPLCTWLKGITQGPSGEGERVLVGLCGSAAAGKSTLAQ
LLCAAYGIIWGASSIQCVSMDAYSYPNAHLAAEVTEYLGRACTLKDIKGL
PKTLDCASLLRDLGRLRTPSKESIKLPAYSRDLHDPVPDSVTVAPDCRVV
LVEGLHLLHQEGLWKEISAALHRTIFLDISRSVCFDRVVGRKVANGRSRD
SSESHFDRVDGPVWDQLQEEKKRADLVLVVQPTSDRQLWVSNIVTKLTRG
EPQPVPQEL*
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mRNA from alignment at E-siliculosus-1a_M_contig92:176542..179503-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig92.17264.1 ID=mRNA_E-siliculosus-1a_M_contig92.17264.1|Name=mRNA_E-siliculosus-1a_M_contig92.17264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2962bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:176542..179503- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCCTCTTAGATGCATTGGCGGCCCTCGAGGCTCAGACTGGAGTCAG TGAGATGCCGCCCCTTGAGTCGAGTCATGTTGATCGTATCAAGCAGGCGG TTGAGGCGGCTGGAGGTTTACCGATTGAGCGTGATTGTCGCAAAGAGATC TTGGGGGTGAATGAAGCTGACCTCGCTGAGGTGATTCTACCGCTGTGCAC CTGGCTCAAAGGAATCACCCAAGGTCCGAGCGGGGAAGGTGAGCAAGATA TCGACGAATGACGTACACACACCCACGAGTATTGCCTTATGTTCGCATTG AATGTGTCTTTGTAAGAGTACATTTCTGGATGCCTTTTGTTGCTTCATCC AGACCCACACTCCCCTCCCTCTATGTCTGCATGCAATCGCCACGTTTGTG TTTCTTTGTCGCGCGGGTCTGTGAAGTGCGAGTAAAGCCGTATACAGTGC CGGCCCACTCGTAGGAAACACCTACACTGAATGTTGTTTCGAATTGTCAT TTTGCATTACTTACGTAATGTTCCCTTAACGCGAGGGGAACTCTCTGAGA GAAACCACGCTGTTAGAACACGTTTCCCGCAGACACTCTCTGCGCCTATC CCACCGTGTCTCTGTCCATCAGTACTACCGTCTCTCCCTCTCCCCTAAGA ATAGCAGCCGGGGTTTCTCTCTTGCCACCGGTGTGAGGAACTCTTCCCAC TGCTGTACGCAACGCCTCAGACGACCAAGTCCCCAAAGGGTACTCTACCA TTCACTTTTCCCACTCCGAGGTCGTCATGAGAGTATCGCTACAGTAGGAC AGAGTATCTTCGTCCCACTACCCTACACCATGTTTTCCACTGCTGCCTCA CCACTACTTTTTCCTTGTCGCCCACTACGCGACGCTCAAGTCGCGAACCC TCTCCGCTACAATATGTGCGTATAGCTTGTACGAATCTGACTTCCACCTC CCTGTCCTCTGGACTACTCGTTCCGAGACCTCCCAACAACAAGGGCAGGC GCCCTTCCCCCCCGAAGGGGGTGCAAGGTTATGTCCTTTGTTCACGCCCC GACGTCGTAGCAATCTCTCAAAAATGCTCGCAGAGCCTGACCATGCCTGA ACACTCTGACTTCATGACCGCTGCGGAACAAGGATAGTGGTACGTAATCG GGCAGCGTCGCATAAACATCGCTCCGCCGTGTGCTCTGTACCCCGATTGC GTGCCGCTAACCTCCTCCCGTACGCCAAGAACGCGAAAGAACACAACTTC TTGGCCTCCAAACATGGCCAATCCTTAGTATCCCTTTTTCTCAGTTAACC TACTGCTGTGTAGCTCTCCTGTTCTACGCTGCCCAGTTCATTTTCCTTGC ACGTGGATTCTCCGAGAGTAATCACTCCAAACGGTCCTCTTCCAAATCTG GTAACCCAAAATACAGGAACGAAGACGCCCCTGGCAAATCGACGCTTTCA ATCAACAGATCTCTGCATCGGCCATGCCTACACAAACTCGCTCTTTAGCG AGGCTCATGGCCTTGATGACTGAGCACAGGCTATTGCTATGCTACCATAG TCTACTCCAGTAGGTTCGCACCATAGTCTACTCCAGTAGGTTAAAGTGTG GTGCCCGGCAGCGCCGCGGCGTCCTATATCTTTCGTCATCTTTTTTTTTT AGAACCTGATCCTCTGTTTCTTGTGAGGTGTATGACTCGTGTTCGGCGCT ATCTTTTGAAGAAGTTGACATAGTTGCAAAGGCCTTACATGTTTGTCGGG ACTCATCATGATCAAAGGCATCCACAACAATCAGCCATTTTTCAAGTAAC AAGTTTTTCGGAATAGATGTGAAAACATACAATCCGCTTAATGCTCGCCC TTCAACCAGGGTTAATTTTGTATCCGGCGGTGGGCACGGGTATCATTGTG CTGTCTGTGTCGTATGCACCAAAAAAGGATTGACACTATCGCGTACCACT GCCTCAGCACAAGATAGTACCGAGTCACACGCGTCGTTCGTGCTCATTGG TTGATAGTTACATTCGCCATGCGCTCGTCTCAATGTACAGGAGAGCGAGT GTTGGTGGGTTTGTGCGGATCTGCAGCTGCGGGCAAGTCGACGCTGGCCC AGTTACTCTGCGCAGCTTACGGCATCATTTGGGGCGCTTCATCTATTCAA TGCGTAAGCATGGATGCATACAGCTATCCCAACGCGCACCTTGCCGCAGA AGTGACGGAGTACCTCGGGCGTGCTTGCACCCTCAAGGATATCAAGGGTC TCCCGAAGACATTGGACTGTGCATCGCTCCTGCGAGATCTGGGCCGTTTG CGTACCCCGAGCAAGGAGAGCATAAAGCTCCCAGCATATAGCAGAGACCT CCACGACCCCGTGCCGGACAGTGTGACGGTAGCACCCGATTGCCGTGTCG TCCTTGTCGAAGGTATGCACGGGTTGAAGATGTGGACTAGGGGGAAAATA GTGCAAGATATTGTGTTGTCTCAGCTCGCTTTACGTCGCGGCATTCGAGA GTCGCGCCTTCTTCGCGTTGTTGAGTTAGTTCCAATCCAACCAACCGGGA GGGATAATGGTAGTTCAACATACGTCATTTCCCAACGCTCCGGGTTTTAA TGACGTCATCTCTTGTCGTCGTTTCCGCTTGGCACTTGACAGGGCTCCAC CTTCTTCATCAAGAAGGTCTATGGAAGGAAATCTCCGCCGCTCTACACCG CACAATATTCCTCGACATTTCGCGCTCCGTTTGCTTCGATAGAGTTGTGG GGAGGAAAGTGGCCAATGGCCGATCGAGAGATTCCTCTGAATCCCACTTT GACCGGGTAGATGGGCCTGTTTGGGACCAATTGCAGGAGGAAAAAAAACG AGCAGATCTCGTCCTAGTTGTACAGCCCACAAGCGATCGCCAACTATGGG TTTCAAACATCGTAACGAAGTTGACGCGTGGCGAGCCGCAACCGGTACCA CAGGAGTTGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:176542..179503-

>mRNA_E-siliculosus-1a_M_contig92.17264.1 ID=mRNA_E-siliculosus-1a_M_contig92.17264.1|Name=mRNA_E-siliculosus-1a_M_contig92.17264.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1860bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:176542..179503- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCCCTCTTAGATGCATTGGCGGCCCTCGAGGCTCAGACTGGAGTCAG
TGAGATGCCGCCCCTTGAGTCGAGTCATGTTGATCGTATCAAGCAGGCGG
TTGAGGCGGCTGGAGGTTTACCGATTGAGCGTGATTGTCGCAAAGAGATC
TTGGGGGTGAATGAAGCTGACCTCGCTGAGGTGATTCTACCGCTGTGCAC
CTGGCTCAAAGGAATCACCCAAGGTCCGAGCGGGGAAGATGGCCCTCTTA
GATGCATTGGCGGCCCTCGAGGCTCAGACTGGAGTCAGTGAGATGCCGCC
CCTTGAGTCGAGTCATGTTGATCGTATCAAGCAGGCGGTTGAGGCGGCTG
GAGGTTTACCGATTGAGCGTGATTGTCGCAAAGAGATCTTGGGGGTGAAT
GAAGCTGACCTCGCTGAGGTGATTCTACCGCTGTGCACCTGGCTCAAAGG
AATCACCCAAGGTCCGAGCGGGGAAGGAGAGCGAGTGTTGGTGGGTTTGT
GCGGATCTGCAGCTGCGGGCAAGTCGACGCTGGCCCAGTTACTCTGCGCA
GCTTACGGCATCATTTGGGGCGCTTCATCTATTCAATGCGTAAGCATGGA
TGCATACAGCTATCCCAACGCGCACCTTGCCGCAGAAGTGACGGAGTACC
TCGGGCGTGCTTGCACCCTCAAGGATATCAAGGGTCTCCCGAAGACATTG
GACTGTGCATCGCTCCTGCGAGATCTGGGCCGTTTGCGTACCCCGAGCAA
GGAGAGCATAAAGCTCCCAGCATATAGCAGAGACCTCCACGACCCCGTGC
CGGACAGTGTGACGGTAGCACCCGATTGCCGTGTCGTCCTTGTCGAAGGA
GAGCGAGTGTTGGTGGGTTTGTGCGGATCTGCAGCTGCGGGCAAGTCGAC
GCTGGCCCAGTTACTCTGCGCAGCTTACGGCATCATTTGGGGCGCTTCAT
CTATTCAATGCGTAAGCATGGATGCATACAGCTATCCCAACGCGCACCTT
GCCGCAGAAGTGACGGAGTACCTCGGGCGTGCTTGCACCCTCAAGGATAT
CAAGGGTCTCCCGAAGACATTGGACTGTGCATCGCTCCTGCGAGATCTGG
GCCGTTTGCGTACCCCGAGCAAGGAGAGCATAAAGCTCCCAGCATATAGC
AGAGACCTCCACGACCCCGTGCCGGACAGTGTGACGGTAGCACCCGATTG
CCGTGTCGTCCTTGTCGAAGGGCTCCACCTTCTTCATCAAGAAGGTCTAT
GGAAGGAAATCTCCGCCGCTCTACACCGCACAATATTCCTCGACATTTCG
CGCTCCGTTTGCTTCGATAGAGTTGTGGGGAGGAAAGTGGCCAATGGCCG
ATCGAGAGATTCCTCTGAATCCCACTTTGACCGGGTAGATGGGCCTGTTT
GGGACCAATTGCAGGAGGAAAAAAAACGAGCAGATCTCGTCCTAGTTGTA
CAGCCCACAAGCGATCGCCAACTATGGGTTTCAAACATCGTAACGAAGTT
GACGCGTGGCGAGCCGCAACCGGTACCACAGGAGTTGTAGGGCTCCACCT
TCTTCATCAAGAAGGTCTATGGAAGGAAATCTCCGCCGCTCTACACCGCA
CAATATTCCTCGACATTTCGCGCTCCGTTTGCTTCGATAGAGTTGTGGGG
AGGAAAGTGGCCAATGGCCGATCGAGAGATTCCTCTGAATCCCACTTTGA
CCGGGTAGATGGGCCTGTTTGGGACCAATTGCAGGAGGAAAAAAAACGAG
CAGATCTCGTCCTAGTTGTACAGCCCACAAGCGATCGCCAACTATGGGTT
TCAAACATCGTAACGAAGTTGACGCGTGGCGAGCCGCAACCGGTACCACA
GGAGTTGTAG
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