mRNA_E-siliculosus-1a_M_contig92.17257.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17257.1
Unique NamemRNA_E-siliculosus-1a_M_contig92.17257.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI)

HSP 1 Score: 1568 bits (4059), Expect = 0.000e+0
Identity = 840/861 (97.56%), Postives = 846/861 (98.26%), Query Frame = 1 
Query:  193 MGGAQPTDENDDGLIAEASLFDAAGGGNEGDLGGVAPADEDLAMAWSGSRLVRSASMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDTKEPSTRAAAAQHHRRHDSTPSAFGDVNLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSESPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQDRSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQTNTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAATXSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSPPFEVDAMMVDHHRVGGTTGASISAAVAAVEAHASSDHEMNRVLPAPGVSTAANSEAAMEQSRLPPLRQDPSDGRNSGGFGRVNGSSMGKNGSSLDIAGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR 2775
            MGGAQPTDENDDGLIAEA+LFDAAGGG+EGDL GVAPADEDLAMAWSGSRLVRS SMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDTKEPSTRAAA      HDSTPSAFGD +LLHPGGEQLTSPPQPMHARRHSAAGALTGMLS+SPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQD SHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQ NTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAAT SASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSP FEVDAMMVDHHRVGGT GASISAAVAAVEAHASSDH+MNRVLPAPGVSTAANSEAAMEQSRLPPLRQDPSDGRNSGGFGRVNGSSMGKNGSSLD+AGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR
Sbjct:    1 MGGAQPTDENDDGLIAEANLFDAAGGGSEGDLVGVAPADEDLAMAWSGSRLVRSTSMSSTGSADAEESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR-WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNKLKEAYEQMQVQPASGSQGMSDESGTDNDTKEPSTRAAAXXXXXXHDSTPSAFGDDDLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSDSPESERRFRRRMGQEDVEARSAQAQGAVRARAGASERAGRESEKHTSSLAVVNELQTVKTEELEQPATTKERSEKQDHSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPHSRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTNSTVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQPNTHTAEMETSTAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLSEEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAATSSASSPGGLAFMRSPFAKGLAPVGSGGATASAGNGSSSPAFEVDAMMVDHHRVGGT-GASISAAVAAVEAHASSDHDMNRVLPAPGVSTAANSEAAMEQSRLPPLRQDPSDGRNSGGFGRVNGSSMGKNGSSLDLAGPNPPAVPASTGRDPTTRSPRSHMRHASESALPSAAMAXXXXXAMQTEPMDDGGRRSDWNQRMGRHRPPSR 859
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.960e-82
Identity = 128/165 (77.58%), Postives = 139/165 (84.24%), Query Frame = 1 
Query:  454 RSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 948
            R  GP GGKWTKEED  LR IVE HGA+NWR VAE LG  R+DVQCLHR WNKVLRPGLHKGPWTEEED IVR+ V   GA KVKWS +A++L GRIGKQCRERWFNHLDP+I KGEW+PEEDRIVF AQ   GNRW +IAKLLPGRTEN+VKNR+NSSARKKWL
Sbjct:    1 RKLGP-GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDTRTDVQCLHR-WNKVLRPGLHKGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A7S2R561_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.640e-78
Identity = 123/164 (75.00%), Postives = 142/164 (86.59%), Query Frame = 1 
Query:  466 PKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQN 957
            P GGKW++EED +LR IVE HGA+NW+ VAE LG +RSDVQCLHR WNKVLRPGLHKGPWTE+ED IV + V   G   +KWSV+A+ LPGRIGKQCRERWFNHLDPSIKKGEW+PEED+++F AQ  +GNRWCEIAKLLPGRTENAVKNR+NSSARK+WL +N
Sbjct:  144 PIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLGPVRSDVQCLHR-WNKVLRPGLHKGPWTEDEDRIVSDMVLAHGVGNIKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWLQEN 306
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.200e-76
Identity = 118/192 (61.46%), Postives = 146/192 (76.04%), Query Frame = 1 
Query:  481 WTKEEDTRLREIVEHHGARNWRMVAEQLGTL-------RSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ-LTPDLLNKLKEAYEQMQVQ 1032
            WT EED RLR +V+ HG+RNW++VA++L          R+DVQCL+R W K LRPGLHKG WTE ED +VRE VE  G  KVKWS +A+RLPGRIGKQCRERWFNHLDP++K+  W+PEED ++F AQA +GNRWCEIAKLLPGRTENAVKNRFNSSA+KKW+ +N     + +T  LL+ ++  YE  Q +
Sbjct:   36 WTSEEDARLRAVVDKHGSRNWKLVADELAQAQPHAQPPRTDVQCLNR-WKKTLRPGLHKGAWTEAEDRVVRESVEECGIAKVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKNGAATGEGITQQLLDAVQRVYEAEQAE 226
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.230e-76
Identity = 113/156 (72.44%), Postives = 130/156 (83.33%), Query Frame = 1 
Query:  475 GKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 942
            G W  +ED RLR+ V+ HG R+WR +AE +G  R+D+QCLHR WNKVLRPGLHKGPWTE ED +VRE VE  G  KVKWS VA++LPGRIGKQCRERWFNHLDP+IK+  W+PEED +VF AQ  +GNRWCEIAKLLPGRTENAVKNRFNSSA+KK
Sbjct:    2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGARTDMQCLHR-WNKVLRPGLHKGPWTETEDRVVRESVEAVGIAKVKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSAQKK 156
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN)

HSP 1 Score: 249 bits (636), Expect = 4.240e-74
Identity = 113/155 (72.90%), Postives = 130/155 (83.87%), Query Frame = 1 
Query:  478 KWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 942
            KWT+EED RLREIVE  GA+NW+ +A  LG +RSDVQCLHR WNKVLRPGL KGPWT +ED IV++ V   GA  +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+PEED I+F  Q   GNRW EIAKLLPGRTENAVKNR+NSSARK+
Sbjct:    1 KWTEEEDNRLREIVETFGAKNWKRLAMLLGNVRSDVQCLHR-WNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA)

HSP 1 Score: 248 bits (633), Expect = 6.550e-73
Identity = 113/182 (62.09%), Postives = 138/182 (75.82%), Query Frame = 1 
Query:  472 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQ--LTPDLLNKLKEA 1011
            GG WT  ED  LR  VE HG RNW+ +AE LG  R+DVQCLHR WNKVL+PGL KGPW +EED +VR+ V   G  +V+WSV+AS+LPGRIGKQCRERWFNHLDP+IKKG W  EED ++F AQ  +GN+WCEIA++LPGRTENAVKNR+NSSAR++W  +      Q    P L+ ++KEA
Sbjct:   11 GGNWTAAEDAELRVAVEAHGGRNWKRIAETLGHGRTDVQCLHR-WNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNSSARRRWFKETGSKMEQDARVPMLVEEIKEA 191
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A8J2X3E5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3E5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 6.930e-73
Identity = 117/163 (71.78%), Postives = 136/163 (83.44%), Query Frame = 1 
Query:  460 KGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 948
            + P GGKWT+EED RLREIVE  GA+NW+ +A  LGT+RSDVQCLHR WNKVLRPGL KGPWT  ED +VR+ V   GA  +KWSV+A++LPGRIGKQCRERWFNHLDP IKKG+W+P+ED ++F  Q   GNRW EIAKLLPGRTENAVKNR+NSSARK+WL
Sbjct:   91 RAPVGGKWTEEEDRRLREIVETFGAKNWKRLAMLLGTVRSDVQCLHR-WNKVLRPGLSKGPWTAAEDRVVRDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPDIKKGDWTPDEDAVLFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKRWL 252
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.990e-70
Identity = 134/227 (59.03%), Postives = 152/227 (66.96%), Query Frame = 1 
Query:  445 KGARSKGPK---GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL-DQNPGGASQ--------------LTPDLLNKLKEAYEQMQVQPASGSQGMSDESG 1071
            KG R K  K   GGKW+KEED RL+ IV+ HGA+NW+ +AE LG  RSDVQCLHR WNKVL+PGLHKGPW   ED +VR+ V   G  KVKWS +A+ LPGRIGKQCRERWFNHLDPSI K  W+ EED I+F AQ   GNRWCEIAKLLPGRTEN VKNR+NSSARKKW  D+   G +               L PDL   +K A    Q     GSQG   +SG
Sbjct:  229 KGVRLKPRKPSQGGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHTRSDVQCLHR-WNKVLKPGLHKGPWQAAEDEVVRDMVIRHGVGKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLAKMLATRSDANLTGLPPDLAAAVKAAR---QTATNGGSQGDQKKSG 451
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Match: A0A7S3HPT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT5_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.280e-68
Identity = 108/161 (67.08%), Postives = 131/161 (81.37%), Query Frame = 1 
Query:  472 GGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTLRSDVQCLHR*WNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQ 954
            GGKW+ EEDT L+EIV+ HGA++W+ VA  LG  R+DVQCLHR WNKVLRPGL KG W++EED IVR  V   G  KV+WS +A +LPGRIGKQCRERWFNHLDP+IKKG+W+ +E+ I++ AQ + GNRWCEI+KLLPGRTENAVKNR+NS   KKWL +
Sbjct:   72 GGKWSTEEDTLLKEIVQVHGAKSWKKVAGLLGKTRTDVQCLHR-WNKVLRPGLQKGAWSKEEDQIVRNMVAQVGVVKVRWSTIAEQLPGRIGKQCRERWFNHLDPTIKKGDWTRDEEIIIYEAQRHFGNRWCEISKLLPGRTENAVKNRWNSCTMKKWLKE 231
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA0_ECTSI0.000e+097.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2BQG7_9STRA1.960e-8277.58Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2R561_9STRA3.640e-7875.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YLN0_9STRA1.200e-7661.46Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A836C844_9STRA3.230e-7672.44Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
F0Y9B4_AURAN4.240e-7472.90Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1GEG8_9STRA6.550e-7362.09Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8J2X3E5_9STRA6.930e-7371.78Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
A0A6U4HUA2_9STRA1.990e-7059.03Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3HPT5_9STRA1.280e-6867.08Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:127804..137696 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1929
Model size2778
Exons16
Ec32 orthologEc-26_002380.1
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.ADK
EggNOG OGsCOG5147@1,KOG0048@2759
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
KEGG Pathwayko04218,ko05166,map04218,map05166
KEGG koko:K21769
Seed eggNOG ortholog2880.D7FRA0
Seed ortholog evalue0.0
Seed ortholog score1159.4
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936456.467075-UTR-E-siliculosus-1a_M_contig92:127803..1278931622936456.467075-UTR-E-siliculosus-1a_M_contig92:127803..127893Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 127804..127893 +
1696251087.2287452-UTR-E-siliculosus-1a_M_contig92:127803..1278931696251087.2287452-UTR-E-siliculosus-1a_M_contig92:127803..127893Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 127804..127893 +
1622936456.4836051-UTR-E-siliculosus-1a_M_contig92:128346..1286551622936456.4836051-UTR-E-siliculosus-1a_M_contig92:128346..128655Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 128347..128655 +
1696251087.241198-UTR-E-siliculosus-1a_M_contig92:128346..1286551696251087.241198-UTR-E-siliculosus-1a_M_contig92:128346..128655Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 128347..128655 +
1622936456.5029051-UTR-E-siliculosus-1a_M_contig92:132298..1323941622936456.5029051-UTR-E-siliculosus-1a_M_contig92:132298..132394Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 132299..132394 +
1696251087.2512455-UTR-E-siliculosus-1a_M_contig92:132298..1323941696251087.2512455-UTR-E-siliculosus-1a_M_contig92:132298..132394Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 132299..132394 +
1622936456.5254536-UTR-E-siliculosus-1a_M_contig92:132951..1330581622936456.5254536-UTR-E-siliculosus-1a_M_contig92:132951..133058Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 132952..133058 +
1696251087.2616155-UTR-E-siliculosus-1a_M_contig92:132951..1330581696251087.2616155-UTR-E-siliculosus-1a_M_contig92:132951..133058Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 132952..133058 +
1622936456.537643-UTR-E-siliculosus-1a_M_contig92:133225..1333251622936456.537643-UTR-E-siliculosus-1a_M_contig92:133225..133325Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 133226..133325 +
1696251087.270463-UTR-E-siliculosus-1a_M_contig92:133225..1333251696251087.270463-UTR-E-siliculosus-1a_M_contig92:133225..133325Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 133226..133325 +
1622936456.5531716-UTR-E-siliculosus-1a_M_contig92:133508..1336491622936456.5531716-UTR-E-siliculosus-1a_M_contig92:133508..133649Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 133509..133649 +
1696251087.279156-UTR-E-siliculosus-1a_M_contig92:133508..1336491696251087.279156-UTR-E-siliculosus-1a_M_contig92:133508..133649Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 133509..133649 +
1622936456.5658038-UTR-E-siliculosus-1a_M_contig92:133843..1338491622936456.5658038-UTR-E-siliculosus-1a_M_contig92:133843..133849Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 133844..133849 +
1696251087.2900639-UTR-E-siliculosus-1a_M_contig92:133843..1338491696251087.2900639-UTR-E-siliculosus-1a_M_contig92:133843..133849Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig92 133844..133849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936456.5782292-CDS-E-siliculosus-1a_M_contig92:133849..1339991622936456.5782292-CDS-E-siliculosus-1a_M_contig92:133849..133999Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 133850..133999 +
1696251087.3017385-CDS-E-siliculosus-1a_M_contig92:133849..1339991696251087.3017385-CDS-E-siliculosus-1a_M_contig92:133849..133999Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 133850..133999 +
1622936456.591123-CDS-E-siliculosus-1a_M_contig92:134213..1343031622936456.591123-CDS-E-siliculosus-1a_M_contig92:134213..134303Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 134214..134303 +
1696251087.3128276-CDS-E-siliculosus-1a_M_contig92:134213..1343031696251087.3128276-CDS-E-siliculosus-1a_M_contig92:134213..134303Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 134214..134303 +
1622936456.6090863-CDS-E-siliculosus-1a_M_contig92:134486..1347381622936456.6090863-CDS-E-siliculosus-1a_M_contig92:134486..134738Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 134487..134738 +
1696251087.3240867-CDS-E-siliculosus-1a_M_contig92:134486..1347381696251087.3240867-CDS-E-siliculosus-1a_M_contig92:134486..134738Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 134487..134738 +
1622936456.6299374-CDS-E-siliculosus-1a_M_contig92:135040..1351421622936456.6299374-CDS-E-siliculosus-1a_M_contig92:135040..135142Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 135041..135142 +
1696251087.3355792-CDS-E-siliculosus-1a_M_contig92:135040..1351421696251087.3355792-CDS-E-siliculosus-1a_M_contig92:135040..135142Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 135041..135142 +
1622936456.6457446-CDS-E-siliculosus-1a_M_contig92:135343..1356371622936456.6457446-CDS-E-siliculosus-1a_M_contig92:135343..135637Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 135344..135637 +
1696251087.350504-CDS-E-siliculosus-1a_M_contig92:135343..1356371696251087.350504-CDS-E-siliculosus-1a_M_contig92:135343..135637Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 135344..135637 +
1622936456.658098-CDS-E-siliculosus-1a_M_contig92:135789..1359721622936456.658098-CDS-E-siliculosus-1a_M_contig92:135789..135972Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 135790..135972 +
1696251087.3645623-CDS-E-siliculosus-1a_M_contig92:135789..1359721696251087.3645623-CDS-E-siliculosus-1a_M_contig92:135789..135972Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 135790..135972 +
1622936456.6766455-CDS-E-siliculosus-1a_M_contig92:136227..1363171622936456.6766455-CDS-E-siliculosus-1a_M_contig92:136227..136317Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 136228..136317 +
1696251087.373695-CDS-E-siliculosus-1a_M_contig92:136227..1363171696251087.373695-CDS-E-siliculosus-1a_M_contig92:136227..136317Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 136228..136317 +
1622936456.6941593-CDS-E-siliculosus-1a_M_contig92:136484..1366821622936456.6941593-CDS-E-siliculosus-1a_M_contig92:136484..136682Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 136485..136682 +
1696251087.3841567-CDS-E-siliculosus-1a_M_contig92:136484..1366821696251087.3841567-CDS-E-siliculosus-1a_M_contig92:136484..136682Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 136485..136682 +
1622936456.775566-CDS-E-siliculosus-1a_M_contig92:136953..1372201622936456.775566-CDS-E-siliculosus-1a_M_contig92:136953..137220Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 136954..137220 +
1696251087.39829-CDS-E-siliculosus-1a_M_contig92:136953..1372201696251087.39829-CDS-E-siliculosus-1a_M_contig92:136953..137220Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 136954..137220 +
1622936456.8030586-CDS-E-siliculosus-1a_M_contig92:137393..1376961622936456.8030586-CDS-E-siliculosus-1a_M_contig92:137393..137696Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 137394..137696 +
1696251087.412264-CDS-E-siliculosus-1a_M_contig92:137393..1376961696251087.412264-CDS-E-siliculosus-1a_M_contig92:137393..137696Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 137394..137696 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17257.1prot_E-siliculosus-1a_M_contig92.17257.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig92 133850..137696 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig92.17257.1

>prot_E-siliculosus-1a_M_contig92.17257.1 ID=prot_E-siliculosus-1a_M_contig92.17257.1|Name=mRNA_E-siliculosus-1a_M_contig92.17257.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=643bp
MGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLLNK
LKEAYEQMQVQPASGSQGMSDESGTDNDTKEPSTRAAAAQHHRRHDSTPS
AFGDVNLLHPGGEQLTSPPQPMHARRHSAAGALTGMLSESPESERRFRRR
MGQEDVEARSAQAQGAVRARAGASERAGRESEKHTSSLAVVNELQTVKTE
ELEQPATTKERSEKQDRSHLLAPHGSAEAPAGGRGQSHMLHRMSPPQHPH
SRLPGHPPRPFAGPSRSTGAGPGGAGVGDGGMGALLGVASQLRPPRIDTN
STVKRESGGGPASLSQLLLTSPFGSNDGARFAATNDAIGQTNTHTAEMET
STAPAGESYSSATAESPVSQAVRETRRQGTRMQEGEQVPLSVLPYFRFLS
EEAQRNVMSQLIDNFQTTSIGKRGVASTSSASAATSSASSPGGLAFMRSP
FAKGLAPVGSGGATASAGNGSSSPPFEVDAMMVDHHRVGGTTGASISAAV
AAVEAHASSDHEMNRVLPAPGVSTAANSEAAMEQSRLPPLRQDPSDGRNS
GGFGRVNGSSMGKNGSSLDIAGPNPPAVPASTGRDPTTRSPRSHMRHASE
SALPSAAMAAAAAAAMQTEPMDDGGRRSDWNQRMGRHRPPSR*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig92:127804..137696+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig92.17257.1 ID=mRNA_E-siliculosus-1a_M_contig92.17257.1|Name=mRNA_E-siliculosus-1a_M_contig92.17257.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9893bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:127804..137696+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGATGGATGGCCAAGAGCATCTTCGTTCGGCTACACTTCCTTCGCCCCG
TAACCCCCCGGAAAAACGCATGTCTCGGTCAGCTTCCCAGGTGGATAGAG
CTAGCGAGGGACCTCTCTCATCCATGAACTAAGAACGCTCAGCCAAATAT
TGACAATTTGTCTAGTGCAGGTTTCAAGCAGTGATCGCTCGTTCCCGCCA
CTTACCCATTTGTGATATCAAAACAACGAGAAGCAGAAGCATCAGCAGGT
GTGTATTTTGTACCAGTAGAATGTGTACGTTCAAGGATTTTGGTTGGTTC
AACTGCTCGTCTCTTCGCTGGTCTTGCTCCGCGCGCTCCTCTGTTCAGTG
ATGTCATGCCCAAAGTGTAAGTTGTAGAGCTAGCTCCACCCGCCGCCCCT
CTGATGTCTGTTTCGTTCTTCGGTCGACCGTTGGCTGCTCTTTCACACGT
TGTTGACAAACACCCGATCGTGCCCGGCTTGCCCCCCTGGTGTCGGACTG
TCTGTCTTGTGTGTTGTGCGTGCCACGGTCGTATTTTTAAAAGGCGGTTA
AACGCCTCGATGCTAGAATGTCACCGCACGCTGCGAAAGCGCGAGGTATC
TTCGACAGAGGCTCTTCCGCAGCACCCATCGGTGGTGGAAACGAAATGGG
AGGAGCCCAGCCTACCGATGAAAACGATGACGGACTTATAGCGGAGGCGA
GTCTCTTTGACGCTGCTGGCGGAGGAAACGAGGGGGATTTGGGTGGCGTG
GCACCGGCGGATGAAGACTTGGCGATGGCATGGTCTGGCTCCCGGCTAGT
GCGGTCAGCCTCCATGTCTTCTACAGGATCTGCGGATGCTGAGGAGTCCG
AGGTGAGACCGGGGTGTTTGTACACGACTATACGGCACGCGACCCATGTT
GGTTTACTCGTTTGTTAATGTGGAAGACAGCTCAGAGGTTCGGAGTGTCC
TCTCTCCACAAAAAATTCGGAATTTTTATTTACACGAAGAGACATTCACA
GCTAAGCGGATCTACTCGAAGGTGTGCCGGTGGCCTTGTGCAGACTATTG
TGTAACGATCGCTTTCGGGATACCATGTATTACCGACGCATCCAGTTTGC
TTTTTCAATGCAAAAGTTGTCCAAATACATTTGGCTGATATCGGCGCACA
TTTGACACAGCTGGTTGTTCCATTCTAGCGCAACAACCTCCGTCATGTGG
TTGGCCAAGGCTTCGCTTTTTCAGTTCGTGTTGTTGGGTCGTGGTTGCCT
AAAAGATACCCCGGCGGGAATGCCACACCGCCACAAAGGGACGCGCCTCA
CATATGTGCCTACATATGATGTGTTTATGGGATACAGGCAGCATGTCGTA
TGTTGTTGTTGTTGTCTTCACATTAAAAACCATCCCGGTCTCTCTATCCA
GTACCTCCTTCTGTCTCAATCTCTCCGTACTAATCCATCACTTGACTCGG
CCAATTTCCGTGGTCACCAGTCTGGGGGGGTAGCCTCCCACTACATGGTA
TACGCCGAATGATTTGTCTCCGATACCCTTCAATTTCCGCGACATTCTCG
ACGCAAAACCACCTCAGGGACTGAGGCAGGCCCCTATAATACTACTTCAT
TGTATATGGGGCTTGATCCTGTCGGGCCCGCTATTATGTTATACCGTTAT
AGTTATACCCCCATCCCTTCGTCGTCTTTGTGCATCGTCCATTCCCTCTA
CCGCTCGTTATTGGCTGAGAACATGTTTGCAGTTGTTGTTCTGTCCTTGG
TCACAGGCCAACTACCCAAAGACACATTTTCTAGATGTCTCCCTCTCCCT
CTTAGATATGTAGCCATAGAAGTCCTCGTGTTTGAAAGGAGGCAGGGGTC
GAGAAGGGTGCGCTTTTGCTGGTGGTCCTATCTTCTCTGATACTCCTGTG
TACCATGCAGCAAGCGCTTCTTGGTGCTCGTCTTACTGCGGGCTGAGCTC
CCCCGGCCGTTCCTCTTTCGGTCTCTTCTTGTCCATCTGACATCGGTAGC
GTTTAGAAATCGGGCTGAAAAAATTAGTTCGTAATTTGTCTTGTCGCAGG
GCGGAATAACTTCATTTTTCTGCCCTGCGAAACCGACGGAAAATTTGCGG
GTCAAATTTGCTGTCTCGCAAACAGGTCACCTTACGTACAAGGAACACCA
TTTTGCTTGCTAACGTAGACCACACACATTATCAAAAAATTTCGACCCTC
GAACAAAGTCAGGGAGGGTTCTCAGAGAGACAAAGCGTTCTGTGTGACAG
GGTCTATAGATGAGGTTGTCGTGGAGTACAGATGGGATGAGGTAGAAAAA
TCTAAGTATATTTGAATTTGCCAAGTGCCACATCTGCCACGCAGTGTACC
TGGATATTTGCGTTCTTTCTCGCCAAATGTCGACGTCCAGGTCCACGCGG
CTTGCAAGTCCTCACAAAAAGCGTTTTTTTTTTTAGTTACAGGACATCGA
TCACGCGGAGCCCCCACAGCGGCCGAATTCCCATGGGACGGGCCGTTATT
CGTCAACAACTCCGGCTGTAGTGGCGATTCAAGACGTTGCCAACCCTCTC
ATAGCAACCTTGCTGTGTAGGCGAAGTCTCGACGTATACTCCTTCGCAGG
AGTATAGCTGCGTGAAGTGTGGTGCTGAAAGCGAAACAGGCTTGAAGCAG
CTGCTCTTCCCTTTGGATCGCACGGTATTTGCCAGGTTGAGAGCGAAATC
AGGGCAAACCAAATGTCTACGCGTGTAGAACATGACATACTTGAGGTATC
CTGCTGATTTCATAGGCCGCAGCTATCTGTGTGGGGAGTACCAGCGGTGA
CAAAGGTGTGCACCAAATGGTGTCACAGGGCAACACATCATGGGGCCTCA
AGCGGGGTACCATCGATTTTCGCCGAGCCCCTTTGTCATATGTTTTGCTT
TTCGTGTGACTTTGCAACCCGGGGTTCAGGCTAATACGAATCTTCTTCTG
AACCCCCACCCCCCACTTGAAAAATGCACCTCCCCTTCCCTTTATCCCGT
ACTCTTCGGTGGATAGAGATTGATTCTTTGTGTTTTTGAACAAAAATAGA
GAGCTCTGCACAAAACGCGATTTATTTAGCGGTGAATATCGTCACCCCCC
CGGGGCGAACGCAAAGACAAAGCACAGAAGCTACGATATTTAAGGAAACG
AGGGGGATGCCCTCGTCACTAGTACATTCGCCTGCGTGTGTTTGCTGGCG
TCGGACAATGCCATACAGTGGAGTATTCGTATTCTTACTGTAGTCGTTTT
CTTTTCTTTTACCATTTTTGTTTTATGTGCTTCACGTACTACTTTGAAAG
AATGGATCCCCGGATATTCATCCTTGTCGGCACCTTCGGCTATTTTTTTT
TTGGAGGGCGGATTTTTGTGTTTTTTAGAGGATATACGCGGCGCTTGTGG
CAGTTTACGAGGATACCACACATAAAAAGAAACACGAATCGATACGACCG
ATCCAGAGGTTATCAGACATTGATAACACACGGTGCTCTTTTTTTCATAT
GTGCTACTTGTAGATGGGGCGGGGCGTCAGCGAAGGTTGAGGATAGACTC
GTATCGCTCGCTCCCCTATTGCTGTCGTAGGAGGTGTCATCCGAGTCAGT
AGACGAACAGCGCAAGCCCCTCAATGTGCTACTGCCGTTCCTCTGTCTGT
CGTAGCTTTCTCGTAGATTCTATCTAGTGTATGTACGTGTTCCATGTTTT
TACATCCCGGGACGTTTATTTCTCTCGCCGGATATTTTTTGCTGGGGAAG
CTCTCGTCCCAACCTCGTGAGTAGCCCCGGGGTGATCATTTTTCGAGAAA
CAGACAAAGAGATAGAAGTATCGATCTCCTCCCGAGGATATTCGATCGAT
TGGTGAGTTGCTGTATGCAAGATTGAGTAACCCAAAACGAGGAGCCATGG
ATCCCCCCCCATGGATATCATGGCGTTTTTAGCTACTGTAGGATAGCCAG
TGCTCACTTCCCCTCTGTACACAAATATTAAGTACCGATTTAGTTATCGA
GAAACGCTAGAGCCGCAGCCCATCGTACGGTTCCGACCTTTCCTGAGAAA
AGCTGTGGCTTTGGAAATGCGTTTCTTCACGCTCAAAAGTACAAAATATG
ACATGACATGAGATCAAAATGACATGAGGAGGAAGGAACATCTACTGCGT
GAAGTACGACCGATTTTTGTATGTGAAGACAGCACGAACAATACGAAAAT
CACAACAGGGGGGTGCGACAAACACGCAACATCCACATTCAGCGCACATT
CAAAGCGCGCCCTGGTTCTGCAAAAGAAAAGTTGGTTGTAGCGGGGAGGT
TCGATCAGAGTGTCTTTGAAGCGGGATCAATTGCCGAGTGTGCTTTTGAA
TTGGAAAGATGTTGGTAGGGTGCGGTCTGCCCTAGTGTTGAATCGTAATC
GTTGTGCGTGCATTGTCGTCGAAACGCCAACGACGAGATATGGTATTTTG
TCTTGTTTCGGCTCATACGCAAGCTCCCCCATGCTGCTTTGTCAGGAGTG
GCTGACGAGCTTGGTGGAGAAGAGCAAAGCAGCGGGAGCCAAGGGAGCCC
GGAGCAAAGGTCCGAAAGGCGGCAAATGGACCAAGGAAGAGGTGAAGGGA
GATGATCATATTCAGTCGCGACTTGAGTCATTACTTGTTCGGGTTCTAAA
TACTGAGAAAGCTCAAAAGGTGGTGGGTGCGAGCCGGTTATAGTTTTTTT
CCAATTGTGATGGTACCGCACCTTGTTGTAGGGTTCGGCGGTTTTTGCGT
ACCAAGTGCCACTCTGGACGGTTCGCGATTCTATTCTCTAATCAAGTGTC
AAGACAAGTAATATTTACCAAGGTGTTTGACACACAAAAGATATAACGCA
CAACAGTGAGAATATAATTATGCATACATACGTGCAGACGAAATCCCGAT
ACAATACAATTCCAAACGATCTCCATTGTAGATTTTACAAGTCCGTGTAC
ATGGATGTAAACTTGAGCCAAGCAAATGCCATGTGTTGCATCCATATCGA
CATAACGGCATGATAAAAGCAGTTTGCTTATTGTGATGTGGCATGCTTCT
GTCAAAATGTTTTTACCATTGCAGCACCGTGCTGTACCGGGCGTGTTCAT
AGTTGCGCCCAATGGTTGAAACTATGCCCTCTGATACTTGTACCGCAGGA
CACCCGTCTTCGAGAGATCGTCGAGCACCACGGAGCTCGGAATTGGCGGA
TGGTAGCCGAGCAGCTGGGAACTCTTCGTTCTGACGTTCAATGTCTTCAC
AGGTAGTTTGATGGTGCTCGTATGGTATGTGTTTCACGTGTCTAATCGAC
GGCCCTATGATTATTTGTGAGTGTTTGTCGTAGGGATGCCCAAGTTGAAA
GAAGAAACACGACCACAGTGTCCATAGATCCTTGGATAGGCAATGATCTT
CTACCGCTGTCATAATTCGCAGATGGAACAAGGTTCTTCGGCCAGGCCTT
CACAAAGGCCCTTGGACTGAAGAGGAAGACAGCATTGTCAGGGAATGCGT
GGAGCATAGCGGGGCTCAAAAGGTTTGTTTCTTATATTCGTTGAGAAGTA
CTATTTTTAGCTCCGAATGTTCGAATCCACGAGACATGGGTCGACTCCGC
CGCATTGCGTGCGTGTTGTTGATCGTACTTCTGTTAGCTCTTGCAAACGG
GGGCCTGGTCACGGACTGAGATGTGCTCCTCTTTGTTGCCTGGCCAACCG
AGCAGGTTAAGTGGTCCGTCGTGGCGTCCCGACTCCCAGGCAGGATAGGC
AAGCAATGCCGCGAGCGATGGTTCAACCACCTTGACCCTAGCATTAAGAA
GGGTGAATGGAGTCCAGAGGAAGATCGAATCGTGTTCGGGGCACAGGTAA
GGTTATGCTCAGGGTAGAGCTGAACCGTGTTTTTCCACTCAGTAGCGTGA
CGAAATGAGATGAGATTGTTTGCCGTTTTGACAATCGCCATCATCCTGTC
GACGCGGGTGTCATCACCGGCATGGAGTGGAGATGTAGTATGCTTTCGTC
CTGACCCTTTGTTTTTCGTGTTTGTGTTTGTCTTTACTAGGCGTACATGG
GCAATAGGTGGTGCGAGATCGCAAAGTTGCTTCCAGGTCGAACAGAAAAC
GCGGTAAAGAACCGCTTCAACTCGTCGGCGAGGAAAAAGTGGCTGGATCA
GAACCCAGGAGGTGCTAGTCAGCTTACACCAGATCTTCTGAACAAGGTGG
GAACGAGCAAATTGCGCAAGTGCGCACGCGTTGCGATGTTGTGTTTCATG
GGAGCACAACAAACAGCCTGGTTGAAGTGGAAGCACAAGTCATCGTCATG
CAGCAGCCTCTGGCATTGGTTTGGCATTGGAACGGTAGCAAATGCCGACC
CCCACAACTCTGAATGTTGGCCTCTCTACGTGTCTGTTGGCTGCGCCAAT
TGTATTTCAGCTGAAGGAGGCCTACGAGCAGATGCAAGTACAGCCGGCCT
CAGGCTCCCAAGGAATGTCCGACGAAAGTGGAACCGACAACGACACCAAG
GTTTGTGTGACGAGAAGCGTGCTATGCTACTGCAATAGTCCATGATGATG
TCGCTGCACGGGGTTCCGTGTCAGTGCAACACGGTTTTGTATTCGTTTGC
AGCAGTGCCCAGGATTTCCCCGACTGATGGTGTGGACAGCTTTCGTGACT
GGCTCGTTCCTTTGTTCGTGTCTGTTGGTGCAGGAGCCTTCCACCCGAGC
TGCTGCCGCCCAGCATCACCGACGCCACGACTCCACCCCCAGCGCGTTCG
GTGATGTTAACTTACTCCACCCCGGCGGCGAGCAGTTGACATCGCCTCCG
CAGCCGATGCATGCCCGCCGGCACTCAGCTGCTGGGGCGCTGACGGGAAT
GCTGAGTGAGTCTCCCGAGAGTGAACGAAGATTCCGTCGGCGTATGGGGC
AAGAAGACGTGGAAGCACGTTCCGCCCAGGCACAGGTGCGCTTTCGATAA
GCGTAGGTGGACGAAAGATCTTGAAAGTGTTGGTCGCGAATTAAAATGAA
TGAACCACAACGAATTAAGTTTGCTATGCCACACGGGATATAATTACTGC
CAGCCACGTCGTTGGCCACCATGGTTTGCGGTGCCCAATTGTTTTTTTCG
TGTGCACCCTGAATGGGCTGGTTGGAAGAACCGAGACATGTTCTGTGAAT
GATGACGCCCGCCTCTTTGAAGCTTGGTCAAACTTAGTCGCTATCTGAAC
CTGTGTTTGTACGGTGTTGCTTGCGCATGTCTACCAGGGGGCAGTTCGGG
CTCGCGCAGGTGCTTCGGAGAGAGCGGGGCGTGAGTCAGAGAAGCATACG
AGCTCTCTCGCAGTTGTCAACGAGCTCCAAACTGTCAAGGTATGCATGCA
TGCTCTCTCCCCCTGTGGTTTTGTTGTCGTGACGTTGATCGACCGTTTGT
TGATTGGAGGGTGTAATAGTGCATGACATGCGCGCCGTGTATCCGATCAC
AGTGGGCTCCTGCTTGAACGTCTAGTTTACGGTTTGGTCAGGTCGGTGTG
GAAAAAGAAAACTCTACCCCACGCACCACATGCCTTACAGACGGAAGAAC
TGGAGCAACCGGCCACTACGAAGGAGCGGTCGGAGAAGCAAGACCGTTCA
CATCTGCTAGCGCCGCACGGTTCCGCGGAAGCACCAGCTGGTGGACGAGG
CCAGTCCCACATGCTGCATCGCATGTCACCCCCACAGCACCCCCACTCTC
GACTTCCTGGGCACCCACCAAGGCCGTTTGCAGGCCCAAGCAGGAGCACA
GGGGCTGGCCCTGGCGGTGCAGGAGTCGGAGATGGGGGAATGGGTGCTCT
TCTCGGGGTAGCGAGTCAGCTTCGGCCTCCACGGGTAAGTTTTTACATCG
TGCTTGAAATTGAAAGCTCATGCCCAAACCAGTAGCGGTTCACTAATTGG
CGCCCGTGTTGTTTTGAGGATGCGCGTGCGCGACTCTCACAGTCAACTCC
GCGTTTCGTCGTCCCACACATGCCTTGTCCGTACAGATCGACACGAACTC
GACCGTGAAACGAGAGAGCGGCGGCGGACCTGCAAGCCTCTCGCAACTTC
TCCTCACTAGCCCGTTCGGCTCGAACGATGGTGCGCGTTTCGCTGCGACG
AACGATGCCATAGGCCAGACAAACACGCACACCGCGGAAATGGAAACATC
GACCGCGCCGGCAGGAGAGGTACGTACGGTGGTGATTGTCCTCTTGTCAT
TCGATGTTGCCACGTCTTTGAGGCTTGCCGCTCTCGATTTGCGCCTAGAT
CTCCTAATATTCTGTTTTTTTGAGCAAGGCGACCTGTCTTCTTCGGCATT
GGAAGACCTTTCCGATGATTGTTGCTCGTTCATGTTCTGGTGCGACGCGC
AGTTCCGTCTCAATACTGTAATGACGTGATAGATTTGCAACGCCAACCCG
CTGTTTCCTCAAATGTCAATACAGAGCTATTCCTCCGCTACTGCGGAATC
TCCTGTTTCTCAAGCGGTGCGTGAAACGAGACGCCAGGGGACGCGGATGC
AGGAAGGAGAACAGGTAAGAGCGTCATTGCCAGCGTTGATGATACAGAGG
GAGCGGTATTGTGGGCAGAGTTTGCATGCTGTATGAAGGAGACCTCGTTG
TCTTCCTTTTGAGAAGCACGGCCGTTGCATCCCTGAACGTAATCTAAATG
CGCTCGGATTGATTCCGCCCACCTGTGCCAGGTGCCGTTGTCGGTCCTTC
CGTATTTCCGCTTCCTGAGTGAGGAAGCCCAGCGAAATGTCATGTCTCAG
CTCATCGACAACTTCCAAACCACGTCCATCGGAAAAAGAGGGGTTGCGTC
AACGTCGTCTGCGTCGGCAGCCACCTCCTCGGCTTCGTCTCCTGGAGGAC
TAGCATTCATGCGATCACCGTTCGCAAAGGTGACTTGCGACGCGGTACAC
TCTTTTTGGCATCCATCTGGGGCAAGGGCAAGGCAAAGTCTCTCCCTGGT
GTTTGGATCATGTATCGCATTGAGAAAAACAGCTTGTTCGCTGAAGCGTG
GCGGTGGCGGATGGGTATGAAGTTATCCGCAGAAAGTGTAAAAGGGGTGT
GAATGAGAAATGATTGCGGGCTCAGGTTCACGCAACGTACTCAACTTTCG
CCATTCCCTTGACAAACACGCGTTGGCCTTTGACACATTACCGCTTCCAG
GGACTCGCACCGGTTGGATCCGGTGGGGCGACGGCCTCGGCCGGCAACGG
ATCCTCGTCGCCACCATTCGAAGTGGACGCGATGATGGTGGACCACCACA
GGGTAGGCGGCACTACTGGGGCATCTATTAGTGCCGCCGTTGCTGCTGTT
GAGGCGCATGCCAGCAGCGATCACGAGATGAACCGAGTGCTACCCGCACC
CGGTGTCTCTACCGCGGCGAACTCGGAAGCGGCAATGGAGCAAAGCCGCC
TCCCTCCTCTCCGGCAGGTTTGTCGCTCTACCTTATAGGCGTGTACAATA
GCGATATTGCGAACATGGTCCTTCGTGTGAAATGTCTGCCAAACATGCCC
CCTCCCAGTACACACGCATCACTGCGAATTGGCTCGTTCACAATCTGTTT
TTTTGGAATCCCGTGCCGTTTCACATCATGCCACGTGCAGGATCCCAGTG
ATGGCAGGAATTCAGGCGGATTTGGCAGAGTGAACGGATCTAGCATGGGC
AAAAATGGCAGCTCCCTCGACATCGCGGGCCCTAACCCTCCTGCAGTACC
CGCAAGCACGGGTAGAGACCCTACGACGAGGTCGCCACGATCACATATGA
GACATGCGTCGGAGAGTGCACTGCCTTCGGCTGCCATGGCTGCCGCCGCT
GCCGCTGCAATGCAGACAGAGCCGATGGATGACGGTGGAAGGCGGAGCGA
TTGGAACCAACGGATGGGAAGACATCGGCCACCGTCGCGTTAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:127804..137696+

>mRNA_E-siliculosus-1a_M_contig92.17257.1 ID=mRNA_E-siliculosus-1a_M_contig92.17257.1|Name=mRNA_E-siliculosus-1a_M_contig92.17257.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3858bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:127804..137696+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGGCAATAGGTGGTGCGAGATCGCAAAGTTGCTTCCAGGTCGAACAGA
AAACGCGGTAAAGAACCGCTTCAACTCGTCGGCGAGGAAAAAGTGGCTGG
ATCAGAACCCAGGAGGTGCTAGTCAGCTTACACCAGATCTTCTGAACAAG
ATGGGCAATAGGTGGTGCGAGATCGCAAAGTTGCTTCCAGGTCGAACAGA
AAACGCGGTAAAGAACCGCTTCAACTCGTCGGCGAGGAAAAAGTGGCTGG
ATCAGAACCCAGGAGGTGCTAGTCAGCTTACACCAGATCTTCTGAACAAG
CTGAAGGAGGCCTACGAGCAGATGCAAGTACAGCCGGCCTCAGGCTCCCA
AGGAATGTCCGACGAAAGTGGAACCGACAACGACACCAAGCTGAAGGAGG
CCTACGAGCAGATGCAAGTACAGCCGGCCTCAGGCTCCCAAGGAATGTCC
GACGAAAGTGGAACCGACAACGACACCAAGGAGCCTTCCACCCGAGCTGC
TGCCGCCCAGCATCACCGACGCCACGACTCCACCCCCAGCGCGTTCGGTG
ATGTTAACTTACTCCACCCCGGCGGCGAGCAGTTGACATCGCCTCCGCAG
CCGATGCATGCCCGCCGGCACTCAGCTGCTGGGGCGCTGACGGGAATGCT
GAGTGAGTCTCCCGAGAGTGAACGAAGATTCCGTCGGCGTATGGGGCAAG
AAGACGTGGAAGCACGTTCCGCCCAGGCACAGGAGCCTTCCACCCGAGCT
GCTGCCGCCCAGCATCACCGACGCCACGACTCCACCCCCAGCGCGTTCGG
TGATGTTAACTTACTCCACCCCGGCGGCGAGCAGTTGACATCGCCTCCGC
AGCCGATGCATGCCCGCCGGCACTCAGCTGCTGGGGCGCTGACGGGAATG
CTGAGTGAGTCTCCCGAGAGTGAACGAAGATTCCGTCGGCGTATGGGGCA
AGAAGACGTGGAAGCACGTTCCGCCCAGGCACAGGGGGCAGTTCGGGCTC
GCGCAGGTGCTTCGGAGAGAGCGGGGCGTGAGTCAGAGAAGCATACGAGC
TCTCTCGCAGTTGTCAACGAGCTCCAAACTGTCAAGGGGGCAGTTCGGGC
TCGCGCAGGTGCTTCGGAGAGAGCGGGGCGTGAGTCAGAGAAGCATACGA
GCTCTCTCGCAGTTGTCAACGAGCTCCAAACTGTCAAGACGGAAGAACTG
GAGCAACCGGCCACTACGAAGGAGCGGTCGGAGAAGCAAGACCGTTCACA
TCTGCTAGCGCCGCACGGTTCCGCGGAAGCACCAGCTGGTGGACGAGGCC
AGTCCCACATGCTGCATCGCATGTCACCCCCACAGCACCCCCACTCTCGA
CTTCCTGGGCACCCACCAAGGCCGTTTGCAGGCCCAAGCAGGAGCACAGG
GGCTGGCCCTGGCGGTGCAGGAGTCGGAGATGGGGGAATGGGTGCTCTTC
TCGGGGTAGCGAGTCAGCTTCGGCCTCCACGGACGGAAGAACTGGAGCAA
CCGGCCACTACGAAGGAGCGGTCGGAGAAGCAAGACCGTTCACATCTGCT
AGCGCCGCACGGTTCCGCGGAAGCACCAGCTGGTGGACGAGGCCAGTCCC
ACATGCTGCATCGCATGTCACCCCCACAGCACCCCCACTCTCGACTTCCT
GGGCACCCACCAAGGCCGTTTGCAGGCCCAAGCAGGAGCACAGGGGCTGG
CCCTGGCGGTGCAGGAGTCGGAGATGGGGGAATGGGTGCTCTTCTCGGGG
TAGCGAGTCAGCTTCGGCCTCCACGGATCGACACGAACTCGACCGTGAAA
CGAGAGAGCGGCGGCGGACCTGCAAGCCTCTCGCAACTTCTCCTCACTAG
CCCGTTCGGCTCGAACGATGGTGCGCGTTTCGCTGCGACGAACGATGCCA
TAGGCCAGACAAACACGCACACCGCGGAAATGGAAACATCGACCGCGCCG
GCAGGAGAGATCGACACGAACTCGACCGTGAAACGAGAGAGCGGCGGCGG
ACCTGCAAGCCTCTCGCAACTTCTCCTCACTAGCCCGTTCGGCTCGAACG
ATGGTGCGCGTTTCGCTGCGACGAACGATGCCATAGGCCAGACAAACACG
CACACCGCGGAAATGGAAACATCGACCGCGCCGGCAGGAGAGAGCTATTC
CTCCGCTACTGCGGAATCTCCTGTTTCTCAAGCGGTGCGTGAAACGAGAC
GCCAGGGGACGCGGATGCAGGAAGGAGAACAGAGCTATTCCTCCGCTACT
GCGGAATCTCCTGTTTCTCAAGCGGTGCGTGAAACGAGACGCCAGGGGAC
GCGGATGCAGGAAGGAGAACAGGTGCCGTTGTCGGTCCTTCCGTATTTCC
GCTTCCTGAGTGAGGAAGCCCAGCGAAATGTCATGTCTCAGCTCATCGAC
AACTTCCAAACCACGTCCATCGGAAAAAGAGGGGTTGCGTCAACGTCGTC
TGCGTCGGCAGCCACCTCCTCGGCTTCGTCTCCTGGAGGACTAGCATTCA
TGCGATCACCGTTCGCAAAGGTGCCGTTGTCGGTCCTTCCGTATTTCCGC
TTCCTGAGTGAGGAAGCCCAGCGAAATGTCATGTCTCAGCTCATCGACAA
CTTCCAAACCACGTCCATCGGAAAAAGAGGGGTTGCGTCAACGTCGTCTG
CGTCGGCAGCCACCTCCTCGGCTTCGTCTCCTGGAGGACTAGCATTCATG
CGATCACCGTTCGCAAAGGGACTCGCACCGGTTGGATCCGGTGGGGCGAC
GGCCTCGGCCGGCAACGGATCCTCGTCGCCACCATTCGAAGTGGACGCGA
TGATGGTGGACCACCACAGGGTAGGCGGCACTACTGGGGCATCTATTAGT
GCCGCCGTTGCTGCTGTTGAGGCGCATGCCAGCAGCGATCACGAGATGAA
CCGAGTGCTACCCGCACCCGGTGTCTCTACCGCGGCGAACTCGGAAGCGG
CAATGGAGCAAAGCCGCCTCCCTCCTCTCCGGCAGGGACTCGCACCGGTT
GGATCCGGTGGGGCGACGGCCTCGGCCGGCAACGGATCCTCGTCGCCACC
ATTCGAAGTGGACGCGATGATGGTGGACCACCACAGGGTAGGCGGCACTA
CTGGGGCATCTATTAGTGCCGCCGTTGCTGCTGTTGAGGCGCATGCCAGC
AGCGATCACGAGATGAACCGAGTGCTACCCGCACCCGGTGTCTCTACCGC
GGCGAACTCGGAAGCGGCAATGGAGCAAAGCCGCCTCCCTCCTCTCCGGC
AGGATCCCAGTGATGGCAGGAATTCAGGCGGATTTGGCAGAGTGAACGGA
TCTAGCATGGGCAAAAATGGCAGCTCCCTCGACATCGCGGGCCCTAACCC
TCCTGCAGTACCCGCAAGCACGGGTAGAGACCCTACGACGAGGTCGCCAC
GATCACATATGAGACATGCGTCGGAGAGTGCACTGCCTTCGGCTGCCATG
GCTGCCGCCGCTGCCGCTGCAATGCAGACAGAGCCGATGGATGACGGTGG
AAGGCGGAGCGATTGGAACCAACGGATGGGAAGACATCGGCCACCGTCGC
GTTAGGATCCCAGTGATGGCAGGAATTCAGGCGGATTTGGCAGAGTGAAC
GGATCTAGCATGGGCAAAAATGGCAGCTCCCTCGACATCGCGGGCCCTAA
CCCTCCTGCAGTACCCGCAAGCACGGGTAGAGACCCTACGACGAGGTCGC
CACGATCACATATGAGACATGCGTCGGAGAGTGCACTGCCTTCGGCTGCC
ATGGCTGCCGCCGCTGCCGCTGCAATGCAGACAGAGCCGATGGATGACGG
TGGAAGGCGGAGCGATTGGAACCAACGGATGGGAAGACATCGGCCACCGT
CGCGTTAG
back to top