mRNA_E-siliculosus-1a_M_contig92.17250.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17250.1
Unique NamemRNA_E-siliculosus-1a_M_contig92.17250.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: D7FYM7_ECTSI (Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM7_ECTSI)

HSP 1 Score: 497 bits (1280), Expect = 8.480e-178
Identity = 246/251 (98.01%), Postives = 248/251 (98.80%), Query Frame = 1 
Query:    1 MSQGPSPHSAPIWHSEGTKNLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            MSQ PSPHSAPIWHSEGTK+LQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQML NTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKEL VTAGERDIYTGDAVEITII+KDGTSTQMFPLKKD
Sbjct:    1 MSQRPSPHSAPIWHSEGTKDLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A835ZC48_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC48_9STRA)

HSP 1 Score: 383 bits (984), Expect = 1.240e-132
Identity = 188/249 (75.50%), Postives = 211/249 (84.74%), Query Frame = 1 
Query:    7 QGPSPHSAPIWHSEGTKNLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            Q PS  +  +W +EG  +  V  S IDHGVTQNPFERRWSPYDFNGGTTLA+AG DYVV+ ADTRMSTGY IMSRDQTKLHQLTSKCVIASAGC++DVTTLWK LD  M MY HN+ K+M+TPA AQML NTLYYRRFFPYYSFNVL GLD +GKG+VFSYDAIGS+ERV YSASGSGQ+YIIP++DNLV FKTR D KP R+A ETV+LVK++F+TAGERDIYTGDAVEI II   GT TQ+F LKKD
Sbjct:    9 QAPSAPALAMWSTEGQSD--VRPSDIDHGVTQNPFERRWSPYDFNGGTTLAVAGEDYVVIGADTRMSTGYQIMSRDQTKLHQLTSKCVIASAGCRSDVTTLWKMLDHRMVMYKHNIGKDMSTPAAAQMLANTLYYRRFFPYYSFNVLAGLDAEGKGAVFSYDAIGSYERVEYSASGSGQSYIIPVMDNLVGFKTRLDPKPVRTAEETVDLVKDVFITAGERDIYTGDAVEICIITATGTQTQIFNLKKD 255
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A7S2DDA1_9STRA (Proteasome subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDA1_9STRA)

HSP 1 Score: 350 bits (898), Expect = 6.300e-119
Identity = 169/250 (67.60%), Postives = 202/250 (80.80%), Query Frame = 1 
Query:   10 GPSPHSAPIWHSEGTKNLQV--LSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            GP     PIWHSEG  ++ +   +  IDHGVTQNP+ERR+SPYDFNGGTTLA+AG D+VVVA DTRMS+GY I+SR  +KLH LTSKC++A+AGCKTDV TL   L++ M MYDH+  KEM+T A AQML NTLYYRRFFPYYSFNVL GLDE+G+G+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D  P  ++ E V +VK+ FVTAGERDIYTGD +EI++I KDG  T  FPLKKD
Sbjct:   47 GPMIQQLPIWHSEGQASVPLGPTADTIDHGVTQNPYERRFSPYDFNGGTTLAVAGKDFVVVAGDTRMSSGYEILSRKVSKLHPLTSKCILAAAGCKTDVDTLTNMLNIKMQMYDHDCGKEMSTTAAAQMLSNTLYYRRFFPYYSFNVLAGLDEEGRGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRTDVMPDFTSEEAVNIVKDAFVTAGERDIYTGDTLEISVIKKDGIETITFPLKKD 296
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A7S2SKB7_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKB7_9STRA)

HSP 1 Score: 338 bits (867), Expect = 8.200e-115
Identity = 163/248 (65.73%), Postives = 195/248 (78.63%), Query Frame = 1 
Query:   10 GPSPHSAPIWHSEGTKNLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            G  P +  +W SEG   L    S  DHGVTQNP+ERR+SPYDFNGGTTLAIAG D+VVVAADTR+S+GY I+SR+ +KLH LT +CV+A+AGCKTDV TL   L   M MY+H+M K M TPAVAQML NTLYYRRFFPYYSFNVL G+D  GKG+VFSYDAIGS+ERVPYS+SGSGQ Y++PL+DNLV FK R+D  P  +  E V +VK+ F+TAGERDIYTGDAVEI +I   G ++++ PLKKD
Sbjct:    9 GAPPPTPIMWSSEGAVALPAEPSAFDHGVTQNPYERRFSPYDFNGGTTLAIAGKDFVVVAADTRLSSGYEILSRNVSKLHPLTGRCVLAAAGCKTDVDTLRNTLHARMQMYEHDMGKAMDTPAVAQMLSNTLYYRRFFPYYSFNVLAGIDSDGKGAVFSYDAIGSYERVPYSSSGSGQNYMVPLMDNLVCFKNRQDTPPELTMEEVVRIVKDAFITAGERDIYTGDAVEIKVITASGVASEIMPLKKD 256
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A7S2FLM8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLM8_9STRA)

HSP 1 Score: 334 bits (856), Expect = 5.090e-113
Identity = 167/248 (67.34%), Postives = 196/248 (79.03%), Query Frame = 1 
Query:   13 PSPHSAPIWHSEGTKNLQV-LSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            PS    PIW SEG    +      IDHGVT+NP+ERR+SPYDFNGGTTLA++G D+VVVA DTRMS+GY I SR+  KLHQLTSK V+A+AGCKTDV TL   L   M MY+H+  KEM+T AVAQML NTLY RRFFPYYSFNVL GLDE+GKG+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D  P  +  E V +VK+ FVTAGERDIYTGDAVEI +I+  G +T++FPLKKD
Sbjct:   17 PSVPPLPIWSSEGPSAGEFGKRDHIDHGVTENPYERRFSPYDFNGGTTLAVSGKDFVVVAGDTRMSSGYEIKSRNVPKLHQLTSKTVLAAAGCKTDVDTLTNLLRTRMQMYEHDCNKEMSTTAVAQMLSNTLYGRRFFPYYSFNVLAGLDEEGKGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRLDPVPDMTVEEIVSIVKDAFVTAGERDIYTGDAVEIKVISATGVTTELFPLKKD 264
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A7S2XWL8_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWL8_9STRA)

HSP 1 Score: 328 bits (842), Expect = 5.020e-111
Identity = 158/247 (63.97%), Postives = 194/247 (78.54%), Query Frame = 1 
Query:   31 PIWHSEGTKN------LQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            PIWHSE + +      L V  S   H V+  P + RW PY+FNGGTTLAIAG+++VVVAADTRMS GY+I+SR+++KLH+LT KC++A+AGC+TDVTTL   LD+ M MY HN+  EM T AVAQML NTLYYRRFFPYYSFNVLCG+D++GKG V+SYDAIGSFE VPYSASGSGQ+YIIPL+D+ V FK R   KP  +  ETV++VK  FVTAGERDIYTGD VEI ++  +G  +++FPLKKD
Sbjct:    9 PIWHSESSNSTVKPYQLPVNGSSQKHEVSGGPVQHRWGPYEFNGGTTLAIAGSNFVVVAADTRMSQGYNILSRNESKLHKLTEKCILAAAGCQTDVTTLRNVLDIRMQMYQHNVGHEMPTTAVAQMLANTLYYRRFFPYYSFNVLCGIDKEGKGVVYSYDAIGSFESVPYSASGSGQSYIIPLMDSTVAFKNRTQPKPNYTIEETVDIVKSAFVTAGERDIYTGDEVEIKVLTAEGCRSEIFPLKKD 255
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: K0S6G4_THAOC (Proteasome subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6G4_THAOC)

HSP 1 Score: 324 bits (830), Expect = 8.740e-109
Identity = 158/251 (62.95%), Postives = 194/251 (77.29%), Query Frame = 1 
Query:    1 MSQGPSPHSAPIWHSEGTKNLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            +S   SPH+ P        +  +  SGIDHGVTQ P+ERR+SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT +CV+ SAGCKTDV  L   LD+ M +Y HN  K MATP+VAQMLGNTLYY+RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++  K R DE+    A E VE+VK+ F+TAGERDIYTGDAV+I +I KDG   Q F LK D
Sbjct:   40 LSVAQSPHADP-------GSSAIDGSGIDHGVTQAPYERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A7S3PW57_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW57_9STRA)

HSP 1 Score: 316 bits (810), Expect = 6.800e-106
Identity = 149/224 (66.52%), Postives = 183/224 (81.70%), Query Frame = 1 
Query:   82 IDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            IDHGVTQ P+ER +SPYDFNGGTTLAI+G DY +VAADTR+STGY I+SR+ TKLH+LTSKCV+ SAGCKTD+  L   LD++  +Y HN  KEM+TP+VAQMLGNTLYY+RFFPYYSFNVL G+D++GKG+V+SYDAIGSFER P +A+GSGQ+++IPLLDN+++   R DEK    A E VE+VK+ FVTAGERDIYTGD +EI +I   G +   FPLK D
Sbjct:   50 IDHGVTQAPYERSFSPYDFNGGTTLAISGPDYAIVAADTRLSTGYQILSRNVTKLHELTSKCVLGSAGCKTDIDQLRSVLDINQKVYHHNHRKEMSTPSVAQMLGNTLYYKRFFPYYSFNVLAGVDKEGKGAVYSYDAIGSFERTPVTATGSGQSFLIPLLDNVIKHNNRNDEKRDLPAEEVVEIVKDAFVTAGERDIYTGDMLEIKVIRASGITNISFPLKAD 273
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: B8BSP9_THAPS (Proteasome subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSP9_THAPS)

HSP 1 Score: 315 bits (808), Expect = 1.740e-105
Identity = 149/231 (64.50%), Postives = 184/231 (79.65%), Query Frame = 1 
Query:   61 LQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            L +  S IDHG+TQ+P+ERR+SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT KCV+ SAGCKTDV  L   LD+ M +Y HN  K MATP+VAQMLGNTLY +RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ ++IPL+DN++  K R D+K    + E VE+VK+ F+TAGERDIYTGDAVEI +I   G  ++ F LK D
Sbjct:   50 LDIDGSNIDHGITQSPWERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Match: A0A6U3TS88_9STRA (Proteasome subunit beta n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TS88_9STRA)

HSP 1 Score: 314 bits (805), Expect = 4.960e-105
Identity = 151/234 (64.53%), Postives = 186/234 (79.49%), Query Frame = 1 
Query:   52 TKNLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKKD 753
            T N+ +  S IDHG+T+ P+ER +SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT +CV+ SAGCKTDV  L   LD+ M +Y HN  K MATP+VAQMLGNTLY +RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ ++IPL+DN++  K R DE+      E VE+VK+ F+TAGERDIYTGDAVEI II K+G  T+MF LK D
Sbjct:   48 TANI-IDGSSIDHGITKAPYERSFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTERCVLGSAGCKTDVDQLRSVLDIKMKVYQHNHRKPMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRCDEQRDLPVEEVVEIVKDAFLTAGERDIYTGDAVEIKIITKEGIRTEMFNLKAD 280
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYM7_ECTSI8.480e-17898.01Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC48_9STRA1.240e-13275.50Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DDA1_9STRA6.300e-11967.60Proteasome subunit beta n=1 Tax=Dictyocha speculum... [more]
A0A7S2SKB7_9STRA8.200e-11565.73Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
A0A7S2FLM8_9STRA5.090e-11367.34Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A7S2XWL8_9STRA5.020e-11163.97Proteasome subunit beta n=1 Tax=Fibrocapsa japonic... [more]
K0S6G4_THAOC8.740e-10962.95Proteasome subunit beta n=1 Tax=Thalassiosira ocea... [more]
A0A7S3PW57_9STRA6.800e-10666.52Proteasome subunit beta n=1 Tax=Chaetoceros debili... [more]
B8BSP9_THAPS1.740e-10564.50Proteasome subunit beta n=1 Tax=Thalassiosira pseu... [more]
A0A6U3TS88_9STRA4.960e-10564.53Proteasome subunit beta n=1 Tax=Skeletonema marino... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:52803..58135 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size756
Model size756
Exons4
Ec32 orthologEc-26_002800.1
Ec32 ortholog descriptionProteasome, subunit alpha/beta
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EC3.4.25.1
EggNOG OGsCOG0638@1,KOG0179@2759
EggNOG free text desc.threonine-type endopeptidase activity
GOsGO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019748,GO:0019774,GO:0019941,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042175,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048046,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051704,GO:0051707,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0090068,GO:0097708,GO:0098542,GO:0098827,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
KEGG ModuleM00337,M00340
KEGG Pathwayko03050,map03050
KEGG koko:K02732
Preferred namePSMB1
Seed eggNOG ortholog2880.D7FYM7
Seed ortholog evalue8.6e-139
Seed ortholog score499.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17250.1prot_E-siliculosus-1a_M_contig92.17250.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig92 52803..58135 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936455.309508-CDS-E-siliculosus-1a_M_contig92:52802..528281622936455.309508-CDS-E-siliculosus-1a_M_contig92:52802..52828Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 52803..52828 +
1696251086.6458962-CDS-E-siliculosus-1a_M_contig92:52802..528281696251086.6458962-CDS-E-siliculosus-1a_M_contig92:52802..52828Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 52803..52828 +
1622936455.332241-CDS-E-siliculosus-1a_M_contig92:53095..532151622936455.332241-CDS-E-siliculosus-1a_M_contig92:53095..53215Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 53096..53215 +
1696251086.6615682-CDS-E-siliculosus-1a_M_contig92:53095..532151696251086.6615682-CDS-E-siliculosus-1a_M_contig92:53095..53215Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 53096..53215 +
1622936455.351878-CDS-E-siliculosus-1a_M_contig92:54431..546231622936455.351878-CDS-E-siliculosus-1a_M_contig92:54431..54623Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 54432..54623 +
1696251086.6720173-CDS-E-siliculosus-1a_M_contig92:54431..546231696251086.6720173-CDS-E-siliculosus-1a_M_contig92:54431..54623Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 54432..54623 +
1622936455.3727934-CDS-E-siliculosus-1a_M_contig92:57717..581351622936455.3727934-CDS-E-siliculosus-1a_M_contig92:57717..58135Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 57718..58135 +
1696251086.6849852-CDS-E-siliculosus-1a_M_contig92:57717..581351696251086.6849852-CDS-E-siliculosus-1a_M_contig92:57717..58135Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig92 57718..58135 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig92.17250.1

>prot_E-siliculosus-1a_M_contig92.17250.1 ID=prot_E-siliculosus-1a_M_contig92.17250.1|Name=mRNA_E-siliculosus-1a_M_contig92.17250.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=252bp
MSQGPSPHSAPIWHSEGTKNLQVLSSGIDHGVTQNPFERRWSPYDFNGGT
TLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDV
TTLWKELDVSMTMYDHNMEKEMATPAVAQMLGNTLYYRRFFPYYSFNVLC
GLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDE
KPARSAAETVELVKELFVTAGERDIYTGDAVEITIIAKDGTSTQMFPLKK
D*
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mRNA from alignment at E-siliculosus-1a_M_contig92:52803..58135+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig92.17250.1 ID=mRNA_E-siliculosus-1a_M_contig92.17250.1|Name=mRNA_E-siliculosus-1a_M_contig92.17250.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5333bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:52803..58135+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCGCAAGGACCTTCACCTCATAGGTGAGTGTTCTTGGTGTCACTATG
TTCAGGTAGTTGTCTACGTGCCACCAAGAGCGGCAGAGGAGTTGCCTCGT
TGCCTCGCTAACCAATCTCAATGTCGTCCTTCTACTTGTACGCAGCAAGA
TCTGCGATCCACCAAGGCGTTCCCACAGCAGGCAATCTTGTTGCTCAATG
TGTAGCGAAGAATATCTTGTGGCTCTTCGCACTCGGGCCCTTCCCCTTCA
CTTACGTTGAAATACTCGAAAACTACTGCTCGCTTTCTTCCAGCGCACCC
ATCTGGCACTCGGAGGGCACGAAGAATCTCCAGGTGTTGTCTTCAGGCAT
TGACCACGGGGTGACTCAAAACCCGTTCGAGCGCAGATGGAGCCCGTATG
ACTTTAATGGCGGGTGAGCAAAGGATTTATCGTTGATGATGCGGAGTCTG
AGGTGGACTGGTAGTTTTTTAGCTGCCTCATACTTATCGTAACAGGAGTA
TGCTAAGTACAGGGGTTTCTCTAAATAGAGGTGAGAGAGCTGGTGCCCGG
CCTACCGCCGCCCCTCCGTATCTACAAAAGTTTTGAGGAGTGTCTCTCCA
GGATCAACGTTCATTTTCGGAAGAGCCCAGAGTTGTGTCGTAGCAGAGAA
CACGGGTGGGTGGTGTGTCAACAAGGAGATGGAGGTTGAAACGTGATGTT
GAAACCGGGGGTGCAGATGTGAACTGGGCGTCCCGCTCTATTTCCTGTGG
CAGTAACACGAGGTCAAACGAAACACAGCATGGGTTCACAGCAGTGGTGG
AGTGTGCGTTTTATCTACGGCCTCTACACAGAAAATACGAGATTGACTGC
TGTCGAAGGCACGTTGAATCAAAATAAAAGTCTTAGGGACCAACCGTTTT
TGTCGCACGTTAACATAGTGGGGGCCAACTGCTCACGGGTAGAAGCTCAG
CTGTTCTTGAACGTCGATGGCCACAACAAAGTACAGTCTCTAGAAGCACG
TTGGCACGTTCCTTGCTTCGCCAGTCTGACGAAACAAAAATGATATTGTA
ACCAAACCAAGAAGCACCCTCCTCTCTCCCGGCCAAAGTTAACAGTAGCC
GGGTAAACGTCAGCGGCGTTGCAATCCTCGACTTGTATACTTGTACGCTG
CATCCTTGAGACACCAATACGATATGCATATGCCTACCTGGTGCCCGACT
TGTACAATGAAACATAAGCGTACGTCCAACGCGTAGGAGCTGCATGGCCT
CTTGGGTTGTCACTATGCTGCGCATGGATTTATAGCGTCCTCGCCACTTT
CGAGTGTTGTACGGGTATGCTGTGTTGTGTTTCAAATACTCTCCTACTTT
GCGCGGATAACGCCGCATAGCGCTACAGCGCGTCGGCCTTCCATCCGCCT
GATCCTTTCGTAGGGTCGTGGGGCAAAGAGGATCGAAAAGATGATCGAAT
TAAACTGTTGCATGATTCGCTAGTGATTGTTCGGCAGTTCCCCGCAAAGG
CTAATCGCCTTGCAGTTTGTACCATGTGTGGGTCAACAAATGTAGTGTCC
TAGTAGTTTCGCAAACATCTCGTCCGTTTCATGTTGTTCGCACATCTTGT
GCTGATTAAACAAGTTTCCCGTGCCCCAGCACGACCCTTGCCATCGCAGG
CGCCGACTACGTGGTTGTGGCGGCCGATACCAGAATGAGTACAGGATACT
CCATCATGTCGCGCGATCAGACCAAGCTTCATCAGCTTACCTCGAAGTGC
GTGATTGCCTCTGCTGGTTGCAAGACAGACGTGACAACTCTGTGGAAAGA
GCTGGATGTTAGCATGACCATGTAAGTTCCGTAGGAACCACGTACTACGC
AACTTGAAAACATGATCAATGTAGAATTTCGAATCGTGTTGGTGTAGGTG
CTGGTATGTCTTGGGATCGTCGACGAACGTCTGTTCAATGTCAAATCTGC
GTCTGTGTGTCGCCGTAGATTTGTCTTGTACCTTGCGGGTGGCGCTGTAA
GTATGATATGTTGCCGATGTGGTGATGTCTTTGATACAGAGAAGTGGCGA
CCCAGGAAAACGGCGGTTTGCGACGAAAATGTCCTTTCTCACAGCAGTAG
TCTCAAGTATCAATGCTGTTGGTTGTTCGTGCTGGCGGTCGTGTGTCTAA
TCAAGTAACTGTACGTCCATTTTGTCATGCATTTGAGAAAAATGCCTAAC
CGTGTATTCGGTCGGAAAGGGTCATAACCTGCGACTAGAGGTAGGGAACA
TTGGCTCAGGTTCAAGCTCGGCCCTCACGCCTCACAGCGACGCCTGAGAG
CGAAGCGGCGGGACTAGGCCTACTCTCAAATCGACACGATAGCGTCACAT
CGCGGCACGTGCCGCATGGGGTGCCGCTCGGCCTCCCTCTCCGCGGAGTC
CACGGGACGCCCTCTCTCAGCGAGACGTCGCCGCCGAGGGCTCCGGGCGC
CTAGCGCCGGACGAGCTTCCCGCGCCGGCGGAACCGCTCCAAATCACGTG
CTCGCACTTTCATTGGCACCTCGGACCTCTTCAAGCGAGACTGTCAATAA
ACGCTGCTTGTGGTTGGGCGGAACTCTCTACCGATGTATTTTTGGCAACT
TGAAGTCATCACAGTTAGGCCTCGAGATTACAAGTTTTTTTGGCCAAAAC
AGTGACCGTGGTCGGTAGCCCAACAGACTAGAGCCAGTTCGAAGTAACCA
ATCAATGATCCCAAAAACAGGTGTGTACGTCACCAATACGCTGAAAAAAC
ACAACTCCACTTGTAAACTTTGTAAACAACACCAAAGCGTACGACGTGCA
CTGCACACAATACACACAGCCACAGGACCAACAGCAAAGGATCATGTGCA
CGACACTAGCCGATCAGGCGAACTAGAATAGCCCATCAGCCGGAGCAGCA
GTGCATGCATATACAGCAGCAGCAAAGTCGGAACATATGCCGATGATGAG
AGCGGAGGAAAAATAGACAAAAAAAACAGGTGCCGTCAGAGGCAGTTCGA
GGTGCTGTTTCTATCCGTCCTGTCGCCTCCCACAAGCTACCACAGGCGAC
CCTGAGCATATGCGCCGCTAGCCCTGCACACACTGACTCTCGGAAGCTAT
CAACTTTGCTCGTCCTCGATAAATTGGTCCCGATATGTGCGTGAGCGTGT
TTTGGTGGAAGCAAGAGATTTGGGTCTGATTCGGCTGAAGAACCGGCCGC
AGGCTCCAACTTCAAGCTTTTCGAAAACACGCTCACGAACATATCGGGAC
CAATTCATCGAGGACGAGCAAAGTTGAGGGCTTCCAAGAATCAGTGTGAG
CAGGGCTAGCGGCGCATCTGCTCAGGGTCGCCTGTGGCAACTTGTGGGCG
GCGGGAGACGGGTGAAACAAAGCTCATGTATGTGTGTATGTCCACGCTCA
GAGACTGAAATGGCCGACGCGGCGTGTAGGTATGTCCAATCGTGTCTCTG
GTGCGCTCCAAGAACGCGCCGTGAACGATCGAACTCTTGAAAAAAATCAT
GCTCTCTTTTTTTTTCGGCCACGATTTTTTGGGTGATCACCCTCAACTCT
TGCCCACGACAGCCAAAACGGGAGTAGCTATTCCTCGACGGCAACGCCTT
GGATCGGGGCGCGGTTTTTTGTGTTGTGGGCGAAACCAAAGCTAGAAATC
ACCAGGAACAGATTTTGGGTTCAAGGGGGAAAAATGGAGCATCGGCGAAA
AGTACTCTAAATATCATACGTTTGCGGCAACCAAAGTGCGCAGAGAAAAT
CTGATCTGGTGTTTCCTTGAGTATGTTCTACAGACTGGTGTCATGCAATA
TAAGAGTCCACTCTCCACCAGGAGCCAGGAATACGTACTCCCAGTTTCTT
GTCTATATTGAAGTCAATTCCAAATCGGCCACCGAGGTTGTGAAAAAAAA
AAAACATTCTTTTGGTGGTCTGCGCGCTGTTTTTTTTTGGTCGTTAACGG
CGTAATCTCGAGGTCTAACAGTAATCGGAACTCGGAACTGTCTAGCACAA
CAAGCAACACTTAAGTCTACCTCTTGTGTAGTTACTGCGAAAAATGGTAC
ATCAGCACTTCTACACCATCGTGTGCTGGGGACTCCTGTGTAACATTGCT
ACGTCGCAATTTGTGTGCGACCAAAAGTGGGCAAACATGTCTCCCAAAAA
TGTGAACAAATGGCGACTTGCCGGATATTCCGAGAATTTACAATTTGCCT
CTCGGAACTCGGAACATCTCTCTTCTTGTGCTAGTTACTGGGGGAAACGT
TGATGTGTGTGCGAAGCATATACTACTACTGTACATGCGTTGTGTGAGCC
CCACAGAGCCATACTAGGTACCAGCCAAAGTTACGCACGGACAGGCTGGC
ACACATGGACGCGATGTCGTGTTCATCCGTGCGCCCGGCTTCAACGTAAA
AAGTTCGTTCTGACAAAAAAACTGGCTCTCGGAATGCATCTCTCTCATAT
TATGCTAACTCTAAAGCACGGATTGAATAATTTATCCCATATGTTTGCTT
AATCAATTTTGATGCGTAGCCTGCTGATCTATCTCTCTGCTGTGGGGGGG
ACAACGGTATGTGTTTGCGTGCATCTCACGGCTATAGCTATGGTACAAGC
CACACTCACACACAATTGCAGTTTTAGAGAAGTGTGGAAGGAGCATGATG
ACGCACGCTTCTCCCGACTTCGAACCTGCCGTACGTTCTTTTCTGCTGTA
CACCACCACCAACGAACCACCGTCCCATTTGGTATGCGGTTATGTACGTT
ACTTTGCTGGTCGGTGATGTCACTTGACTTATTTGTGGACTAGGGTACCA
AGGATGTTCGCGGTCAGCTATTTGCTTTGCTGTCTTTCGTGCACAAAACA
GGTTGCAAACATCACCGGGAACATCGGCTCATCATTCGCTGCGTTCGTTA
ATATTTTCACGTCAGGTATGATCACAACATGGAAAAGGAGATGGCGACTC
CAGCAGTGGCTCAGATGCTTGGCAATACCCTATACTACCGGCGATTCTTC
CCGTACTACTCTTTCAACGTCCTGTGCGGTCTGGATGAACAGGGGAAGGG
ATCTGTCTTTTCTTACGATGCTATTGGATCGTTCGAACGAGTCCCGTACA
GCGCGTCAGGCTCTGGCCAGACGTACATAATCCCACTCCTTGACAATTTG
GTAGAATTCAAAACACGAAAGGACGAGAAGCCCGCACGCTCAGCAGCTGA
AACGGTGGAGTTGGTGAAAGAGCTGTTCGTCACCGCAGGCGAACGAGACA
TCTACACGGGGGACGCGGTGGAGATCACAATCATTGCAAAAGATGGCACA
TCGACACAGATGTTCCCACTTAAGAAAGATTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:52803..58135+

>mRNA_E-siliculosus-1a_M_contig92.17250.1 ID=mRNA_E-siliculosus-1a_M_contig92.17250.1|Name=mRNA_E-siliculosus-1a_M_contig92.17250.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1512bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:52803..58135+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCGCAAGGACCTTCACCTCATAGATGTCGCAAGGACCTTCACCTCAT
AGCGCACCCATCTGGCACTCGGAGGGCACGAAGAATCTCCAGGTGTTGTC
TTCAGGCATTGACCACGGGGTGACTCAAAACCCGTTCGAGCGCAGATGGA
GCCCGTATGACTTTAATGGCGGCGCACCCATCTGGCACTCGGAGGGCACG
AAGAATCTCCAGGTGTTGTCTTCAGGCATTGACCACGGGGTGACTCAAAA
CCCGTTCGAGCGCAGATGGAGCCCGTATGACTTTAATGGCGGCACGACCC
TTGCCATCGCAGGCGCCGACTACGTGGTTGTGGCGGCCGATACCAGAATG
AGTACAGGATACTCCATCATGTCGCGCGATCAGACCAAGCTTCATCAGCT
TACCTCGAAGTGCGTGATTGCCTCTGCTGGTTGCAAGACAGACGTGACAA
CTCTGTGGAAAGAGCTGGATGTTAGCATGACCATCACGACCCTTGCCATC
GCAGGCGCCGACTACGTGGTTGTGGCGGCCGATACCAGAATGAGTACAGG
ATACTCCATCATGTCGCGCGATCAGACCAAGCTTCATCAGCTTACCTCGA
AGTGCGTGATTGCCTCTGCTGGTTGCAAGACAGACGTGACAACTCTGTGG
AAAGAGCTGGATGTTAGCATGACCATGTATGATCACAACATGGAAAAGGA
GATGGCGACTCCAGCAGTGGCTCAGATGCTTGGCAATACCCTATACTACC
GGCGATTCTTCCCGTACTACTCTTTCAACGTCCTGTGCGGTCTGGATGAA
CAGGGGAAGGGATCTGTCTTTTCTTACGATGCTATTGGATCGTTCGAACG
AGTCCCGTACAGCGCGTCAGGCTCTGGCCAGACGTACATAATCCCACTCC
TTGACAATTTGGTAGAATTCAAAACACGAAAGGACGAGAAGCCCGCACGC
TCAGCAGCTGAAACGGTGGAGTTGGTGAAAGAGCTGTTCGTCACCGCAGG
CGAACGAGACATCTACACGGGGGACGCGGTGGAGATCACAATCATTGCAA
AAGATGGCACATCGACACAGATGTTCCCACTTAAGAAAGATTAGGTATGA
TCACAACATGGAAAAGGAGATGGCGACTCCAGCAGTGGCTCAGATGCTTG
GCAATACCCTATACTACCGGCGATTCTTCCCGTACTACTCTTTCAACGTC
CTGTGCGGTCTGGATGAACAGGGGAAGGGATCTGTCTTTTCTTACGATGC
TATTGGATCGTTCGAACGAGTCCCGTACAGCGCGTCAGGCTCTGGCCAGA
CGTACATAATCCCACTCCTTGACAATTTGGTAGAATTCAAAACACGAAAG
GACGAGAAGCCCGCACGCTCAGCAGCTGAAACGGTGGAGTTGGTGAAAGA
GCTGTTCGTCACCGCAGGCGAACGAGACATCTACACGGGGGACGCGGTGG
AGATCACAATCATTGCAAAAGATGGCACATCGACACAGATGTTCCCACTT
AAGAAAGATTAG
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