mRNA_E-siliculosus-1a_M_contig92.17243.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: D7FYM1_ECTSI (NLE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM1_ECTSI) HSP 1 Score: 358 bits (920), Expect = 1.580e-119 Identity = 181/218 (83.03%), Postives = 183/218 (83.94%), Query Frame = 1
Query: 1 MLASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALSKFTPEEAQAVALERYNLAR 654
MLASGGGDMTVRFWDVQTSLPRFTCR PSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKV WNVEGEGRKLGILVRTLVGHGHRVNTLALSCEA+LRTGPFGKEECALKA+SKFTPEEAQAVALERYNLAR
Sbjct: 169 MLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKV----WNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSKFTPEEAQAVALERYNLAR 382
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: A0A7S2V738_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V738_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.900e-89 Identity = 126/176 (71.59%), Postives = 140/176 (79.55%), Query Frame = 1
Query: 13 GGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCE 540
GGGD TVRFWD T +PR TCRGH+HHVLCTAW+P+G+RFASADRKGEI LW+P G G PL HKQWVT L+WEPLHRN ER+ASSSKD +KIWNTRTGRCE++LSGH SVE + WGGEGLLYSASRDRTIKV W VE G+ LVRTLVGHGHRVNTLALS +
Sbjct: 1 GGGDTTVRFWDTNTCMPRRTCRGHKHHVLCTAWSPDGRRFASADRKGEIILWNPDSGEMVGTPLKGHKQWVTYLSWEPLHRNPRAERMASSSKDTTVKIWNTRTGRCELSLSGHTQSVECVKWGGEGLLYSASRDRTIKV----WAVEDRGQ----LVRTLVGHGHRVNTLALSSD 168
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: A0A836CH64_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH64_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.860e-81 Identity = 133/217 (61.29%), Postives = 149/217 (68.66%), Query Frame = 1
Query: 4 LASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALSKFTPEEAQAVALERYNLAR 654
LASGGGDMTVRFWDV T PRFTCR P+ G G PL +HKQWVTSL+WEP+H+N+A ERLASSSKD L+K+WN RTGRC VTLSGHADSVE + WGGEGLLYSASRDR N+ VW+++GEGRK GILVRTL GHGHRVNTLALSCE LRTGPFG K ++ TPEEAQA AL RY A+
Sbjct: 163 LASGGGDMTVRFWDVNTCTPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGQPIGSPLVSHKQWVTSLSWEPMHKNAACERLASSSKDGLVKVWNVRTGRCLVTLSGHADSVECVKWGGEGLLYSASRDR----NIMVWSMDGEGRKFGILVRTLAGHGHRVNTLALSCEYVLRTGPFGH-----KPVTFATPEEAQAAALARYQEAK 370
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: K0TNB6_THAOC (NLE domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TNB6_THAOC) HSP 1 Score: 258 bits (660), Expect = 4.700e-80 Identity = 114/184 (61.96%), Postives = 140/184 (76.09%), Query Frame = 1
Query: 13 GGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPF 564
GGGD TVRFWDV TS PR TCRGH+ HVLCT+W+P+G RFAS D++G + LWDP+KG G + AH +W+T +AWEP+H N++ ERL ++SKD K+WNTRT RCE T+SGH DS+E + WGGEGL+Y+ASRDRTIKV WN + G+LVRTL GHGHRVN LALSC+ RTGPF
Sbjct: 203 GGGDATVRFWDVNTSTPRHTCRGHKDHVLCTSWSPDGLRFASGDKRGNLILWDPTKGTASG-TIKAHSKWITGMAWEPMHSNASCERLVTASKDGHAKVWNTRTRRCEATMSGHLDSIEGVRWGGEGLVYTASRDRTIKV----WNANEAKGRTGLLVRTLTGHGHRVNALALSCDYVCRTGPF 381
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: UPI0010A032B1 (notchless protein homolog 1-like n=1 Tax=Grammomys surdaster TaxID=491861 RepID=UPI0010A032B1) HSP 1 Score: 215 bits (547), Expect = 5.130e-66 Identity = 108/218 (49.54%), Postives = 138/218 (63.30%), Query Frame = 1
Query: 4 LASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALS-KFTPEEAQAVALERYNLAR 654
LASG GD TVRFWD+ T P FTC+GHRH VL +W+P+GK+ AS + G+I LWDPS G+Q G+ L+ H EPLH N +ASSSKD +++W+T GRCE L+GH SV + WGG+GLLYSAS+DRTIKV W G+L RTL GHGH VNT+ALS + +LRTG F + + A + + +E + A RYNL R
Sbjct: 39 LASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGMQVGRTLTGHXXXXXXXXXEPLHMNPECRYVASSSKDGSVRVWDTTAGRCEQILTGHTQSVTCLRWGGDGLLYSASQDRTIKV----WRAHD-----GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPADATVNAQDLQGSLKELKERASSRYNLVR 247
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: G1N4Q4_MELGA (Uncharacterized protein n=11 Tax=Neognathae TaxID=8825 RepID=G1N4Q4_MELGA) HSP 1 Score: 210 bits (535), Expect = 5.350e-63 Identity = 107/218 (49.08%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 4 LASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALSKF-TPEEAQAVALERYNLAR 654
LASG GD TVRFWD+ T P+FT +GHRH VL AW+P+GK+ AS + +I LWDP+ G Q G+ L+ H +W+T L WEPLH N LAS+SKD I+IW+T GRC+ L+ H SV + WGG+GLLYS+S+DRTIKV W + GIL RTL GH H VNT+ALS + LRTG F E + + E + A +RY+ R
Sbjct: 60 LASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTSHTQSVTCVKWGGDGLLYSSSQDRTIKV----WRSQD-----GILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVR 268
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: A0A7S3XZG7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG7_HETAK) HSP 1 Score: 211 bits (537), Expect = 3.680e-62 Identity = 117/217 (53.92%), Postives = 133/217 (61.29%), Query Frame = 1
Query: 4 LASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAG--ERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALSKF-TPEEAQAVALERYN 645
LASGGGD VRFWDV T LP+ T P+ QGQPL+ H+QWVTSLAWEPLHR ERLAS+SKD KIWN RTGRCE++LSGH DSVE + WGGEGL+Y+ASRDRTIKV W+ + G KLG LVRTLVGHGHRVNTLALS + LRTGPF ++F +PE A A ERYN
Sbjct: 169 LASGGGDGAVRFWDVHTCLPKHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASARPQGQPLTGHRQWVTSLAWEPLHRRRPHPCERLASASKDGTCKIWNVRTGRCEISLSGHTDSVECVKWGGEGLIYTASRDRTIKV----WDAD-VGPKLGTLVRTLVGHGHRVNTLALSSDYVLRTGPFDHHG------NRFASPEAAADAAEERYN 374
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: A0A482SD67_9ARCH (NLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SD67_9ARCH) HSP 1 Score: 211 bits (538), Expect = 6.430e-62 Identity = 111/214 (51.87%), Postives = 132/214 (61.68%), Query Frame = 1
Query: 4 LASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALSKFTPEEAQAVALERYN 645
LASGGGDMTVRFW+V T+LP TC G Q+GQPL HK+WVT+LA+EPLH N+ R+ASSSKD +KIWN TG CE T+SGHADSVE + WGG GLLY+ASRDRTI+V W V+G GR +LVRTLVGH HR+NTLAL+ + RTG F + + TPEEAQ VAL+RY
Sbjct: 212 LASGGGDMTVRFWNVITNLPMHTCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGTQRGQPLRGHKKWVTALAFEPLHLNAHSTRMASSSKDQTVKIWNLSTGLCESTISGHADSVECVKWGGTGLLYTASRDRTIRV----WAVDGHGRSQHMLVRTLVGHAHRINTLALNTDYLFRTGSFELAQ----TNANLTPEEAQQVALKRYQ 417
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: B7G8X7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8X7_PHATC) HSP 1 Score: 204 bits (519), Expect = 2.660e-59 Identity = 89/136 (65.44%), Postives = 107/136 (78.68%), Query Frame = 1
Query: 1 MLASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSA 408
MLASGGGD TVRFWDV TS P++TC+ H++HVLC AWAPNGKRF SAD+ G +WDP+KG G+ + AH+QW+TSLAWEP+H N+A +RLA+SSKD IKIWN RT +TLSGH DSVE I W G+G LYSA
Sbjct: 199 MLASGGGDTTVRFWDVHTSTPKYTCKQHKNHVLCVAWAPNGKRFVSADKNGVWIVWDPTKGEAVGKAVKAHRQWITSLAWEPMHLNAACDRLATSSKDGTIKIWNVRTQAQNLTLSGHTDSVESIKWSGDGFLYSA 334
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Match: A0A3Q7MK11_CALUR (notchless protein homolog 1 isoform X2 n=17 Tax=Eutheria TaxID=9347 RepID=A0A3Q7MK11_CALUR) HSP 1 Score: 200 bits (508), Expect = 1.330e-58 Identity = 100/218 (45.87%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 4 LASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVNLGVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEASLRTGPFGKEECALKALS-KFTPEEAQAVALERYNLAR 654
LASG GD TVRFWD+ T P FTC+GHRH VL +W+P+GK+ AS + G+I LWDPS G Q G+ L+ H +W+T L+WEPLH N A +ASSSKD +++W+T GRCE L+GH SV + WGG+GLLYSA GH VNT+ALS + +LRTG F E ++ A + + +E + AL RYNL R
Sbjct: 95 LASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSRWITGLSWEPLHANPACRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSAXXXXXXXXXXXXXXXXXXXXXXX---------GHWVNTMALSTDYALRTGAFEPAEASVNAQDLQGSLQELKDGALRRYNLVR 303 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig92.17243.1 >prot_E-siliculosus-1a_M_contig92.17243.1 ID=prot_E-siliculosus-1a_M_contig92.17243.1|Name=mRNA_E-siliculosus-1a_M_contig92.17243.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=219bp MLASGGGDMTVRFWDVQTSLPRFTCRGHRHHVLCTAWAPNGKRFASADRKback to top mRNA from alignment at E-siliculosus-1a_M_contig92:3665..5244- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig92.17243.1 ID=mRNA_E-siliculosus-1a_M_contig92.17243.1|Name=mRNA_E-siliculosus-1a_M_contig92.17243.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1580bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:3665..5244- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig92:3665..5244- >mRNA_E-siliculosus-1a_M_contig92.17243.1 ID=mRNA_E-siliculosus-1a_M_contig92.17243.1|Name=mRNA_E-siliculosus-1a_M_contig92.17243.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1314bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig92:3665..5244- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |