mRNA_E-siliculosus-1a_M_contig91.17241.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: D8LJS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS5_ECTSI) HSP 1 Score: 500 bits (1287), Expect = 9.970e-178 Identity = 261/286 (91.26%), Postives = 268/286 (93.71%), Query Frame = 1
Query: 7 PTSFGVRRSSPRPALVYSLISASLVLLLVVSARLLPP-RTTATAPERRLPDIMSEKNEEGVSPQHQQQGG-AYRANRVAAGNDFVKFVLQESVGSDDRDPAEAATWRTLNFGEVADLFKKGLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL 858
PTSF VRRSSPRPAL+YSLISASLVLLLVVSA LLPP RTTATAPERRLPDIMSEK E+GVSPQ YRANRVAAGNDFVKFVLQESVGSD RDPAEAATWRTLNF EVADLFKKGLPDCFLES+ EANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASR+ GTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAF+RTAPRDQVV+FFGAVGEGLEDEIASRADETPVWLSTSGLGVYW LHARLDSVPKYYTYAPFK+L
Sbjct: 2 PTSFRVRRSSPRPALLYSLISASLVLLLVVSAGLLPPTRTTATAPERRLPDIMSEKTEDGVSPQXXXXXXXGYRANRVAAGNDFVKFVLQESVGSDGRDPAEAATWRTLNFREVADLFKKGLPDCFLESMKEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASRK-GTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFLRTAPRDQVVQFFGAVGEGLEDEIASRADETPVWLSTSGLGVYW--LHARLDSVPKYYTYAPFKAL 284
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A6H5L146_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L146_9PHAE) HSP 1 Score: 469 bits (1208), Expect = 6.990e-166 Identity = 241/264 (91.29%), Postives = 251/264 (95.08%), Query Frame = 1
Query: 7 PTSFGVRRSSPRPALVYSLISASLVLLLVVSARLLPPRTTATAPERRLPDIMSEKNEEGVSPQHQQQGGAYRANRVAAGNDFVKFVLQESVGSDDRDPAEAATWRTLNFGEVADLFKKGLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYV 798
PTSFGV SSPRPALVYSLISASLVLLLV+SA LLPPRTTAT+P+ RLPDIMSEKNEEGVSPQ QQ+GGAYRANRVAAGNDFVKFVLQESVGSD R PAEAATWRTLNF EVA+LFK+GLPDCFLES+ E NFEAVFWES PVTRTTTDKPYEYVLVDSPRLAAVTADG PFAEHIAS++ GT+DVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYV
Sbjct: 2 PTSFGVCCSSPRPALVYSLISASLVLLLVLSAGLLPPRTTATSPDGRLPDIMSEKNEEGVSPQ-QQKGGAYRANRVAAGNDFVKFVLQESVGSDGRVPAEAATWRTLNFREVAELFKQGLPDCFLESMKETNFEAVFWESVPVTRTTTDKPYEYVLVDSPRLAAVTADGSPFAEHIASKQ-GTDDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYV 263
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A2D6ITT3_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2D6ITT3_9GAMM) HSP 1 Score: 144 bits (362), Expect = 1.020e-38 Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 319 RTLNFGEVADLFKK--GLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
R L+ +V L++ G D F +++ + F A FWE P++ + D P+E V+VDSP L+ VTAD PF + + + + + F NL DA L+ PC G Q YAHLA FVR AP F+ VG L +AS+ PVWLSTSGLGVYW LHARLD PKYYTYAP++
Sbjct: 21 RALSCHDVCSLWQHDTGFVDFFSKTLADMPFSAFFWEVCPISMVSVDTPFECVVVDSPVLSGVTADSGPFGSQLDALHS-PDGIALFENLGGDALLIAPCTG--QGAVAYAHLALFVRHAPLQLQRTFWARVGTALAASLASK----PVWLSTSGLGVYW--LHARLDQYPKYYTYAPYRQ 192
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A4R1HCI6_9GAMM (Uncharacterized protein n=1 Tax=Thiogranum longum TaxID=1537524 RepID=A0A4R1HCI6_9GAMM) HSP 1 Score: 143 bits (360), Expect = 2.210e-38 Identity = 82/202 (40.59%), Postives = 117/202 (57.92%), Query Frame = 1
Query: 262 VLQESVGSDDRDPAE--AATWRTLNFGEVADLFKKGLPDC--FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
++QE + DP A L++ +V + + F + + + FEA WE+ P+TR + +P+EYVLVDSPRLA + D FAEH + +VSF NL DARL+ PC +P + HLAAF+R AP + VV+ + +V E ++S + P+W+ST GLGVYW LH RLDSVPKYY YAP+++
Sbjct: 4 MIQEQLQPGSTDPYRITADDGSVLSYAQVIEHWGNNTSFALFFSKQLAASAFEAFLWETPPITRDSLQRPFEYVLVDSPRLARASPDSTAFAEHFETDRGQM--MVSFDNLGGDARLIAPCP--LEPVSACTHLAAFLRQAPANAVVELWRSVSEA----VSSALSDQPLWVSTCGLGVYW--LHVRLDSVPKYYRYAPYQT 195
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A426QJY7_9GAMM (Uncharacterized protein n=1 Tax=Thiohalobacter thiocyanaticus TaxID=585455 RepID=A0A426QJY7_9GAMM) HSP 1 Score: 141 bits (355), Expect = 1.190e-37 Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1
Query: 376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL 858
F +S+ EA F A FWE+ VT ++P+E+V V++P L AD R FA R G + + F NL DARLV PC P A YAHL +FVR AP Q F+ +GE ++ R ++P+WLSTSGLGVYW LHARLDS PKYYTYA ++++
Sbjct: 47 FNQSLAEAPFAACFWETPAVTHAGLERPFEFVCVEAPSLVGTNADPRAFAAQF-DRHCGEDAIAEFSNLGGDARLVAPCP--VPPNACYAHLLSFVREAPAGQRDAFWRRIGEA----VSQRLSDSPLWLSTSGLGVYW--LHARLDSRPKYYTYAAYRAV 198
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A5J4EAD9_9BACT (Uncharacterized protein n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4EAD9_9BACT) HSP 1 Score: 137 bits (346), Expect = 2.330e-36 Identity = 74/160 (46.25%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
F+ VT+A F+A++WE+ PVT T D+ +E+VLVDS +L V AD FA + S + +D+V+F NL +DA LVVPC G YAHLA F R AP Q F+ VG + + ++ R P+WLST+G G++W LH RLDS PKYYT+ P++S
Sbjct: 45 FISLVTQAPFQALYWETPPVTSATFDQEFEFVLVDSSQLRNVRADPLTFASYFESSDVD-DDIVTFWNLGKDALLVVPCPVGSDSA--YAHLAEFTRNAPVAQQHAFWKHVGNAVRERLSDR----PLWLSTAGTGIFW--LHVRLDSRPKYYTHDPYRS 195
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A846AAJ9_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AAJ9_9CYAN) HSP 1 Score: 137 bits (346), Expect = 3.460e-36 Identity = 70/161 (43.48%), Postives = 103/161 (63.98%), Query Frame = 1
Query: 376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL 858
F +++ +EA FWE+ P++ T +P+E L+DSP+LA VTAD + FA+++ + ++V +F NL+ D LVVPCRG QQ YAHLAAFVR+AP Q + VG + + + + P+W+STSGLGVYW LH RLD+ PKYY + ++ +
Sbjct: 56 FTQALAHMPYEAFFWETPPLSEATLQQPFECCLIDSPQLAKVTADPQAFADYLHAERC--DEVQAFPNLKGDTLLVVPCRGSQQQ--QYAHLAAFVRSAPTPQTHALWQVVGRSVA-RLLNEYGQQPLWVSTSGLGVYW--LHVRLDAFPKYYRHPTYQQM 209
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: UPI001880BA32 (hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001880BA32) HSP 1 Score: 136 bits (343), Expect = 6.710e-36 Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 319 RTLNFGEVADLFK--KGLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTND-VVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFK 852
+ + + EV L++ K F+ + +A F A FWE+ ++ T ++ +E+VLVDSP LA V A+ FA H A+ AG + +++F NL +DA LVVPC + Y H+AAF+R AP Q + +VG LE ++ DE P+WLSTSGLGVYW LH RLDS PKYY+Y P++
Sbjct: 24 KLILYSEVIQLWQHSKDFRTFFISLLADAPFSAFFWETPALSDATINQVFEFVLVDSPNLAGVQANPSDFASHFAA--AGEKESIITFPNLGKDALLVVPCPKAST--STYRHIAAFMREAPTQQKHALWQSVGLALEQKL----DEHPIWLSTSGLGVYW--LHIRLDSYPKYYSYHPYR 194
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A3B0VAL2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VAL2_9ZZZZ) HSP 1 Score: 135 bits (339), Expect = 2.360e-35 Identity = 74/160 (46.25%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
F+ + +A F+A FWE+ PVTR + +P+E+VLVD+P+LA V A+ R FA + ++ + VV F NL DA LVVPC Q Y HLA F R AP +Q F+ VG + + + R P+W+STSGLGVYW LH RLDS PKY TY P++
Sbjct: 45 FIGLLADAPFDAYFWETPPVTRESLQRPFEFVLVDAPQLAQVQAEPRAFASYFSA-----DPVVDFGNLGGDAHLVVPCP--QTAVTAYPHLATFSRLAPIEQQHHFWQRVGTAVSNHVGER----PLWVSTSGLGVYW--LHVRLDSRPKYVTYRPYRE 191
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A661FR64_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661FR64_9GAMM) HSP 1 Score: 135 bits (339), Expect = 2.960e-35 Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 373 CFLESV-TEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
CF SV +A F A FWE+ V+ T D+ +E+VLV+SP+LA + + R FA A+ + V+ F NL DA LVVPC G P + Y+ ++ F R AP DQ + + VG LE +++ R PVWLSTSGLGVYW +H R DS PKYYTY P+++
Sbjct: 46 CFFVSVLVDAPFPAYFWETPAVSSATIDREFEFVLVESPQLAGIRTNERAFANQFAAARPEAS-VIEFSNLGGDATLVVPCLQG--PISAYSQISTFARLAPADQQHQLWALVGATLEQQLSER----PVWLSTSGLGVYW--IHIRFDSEPKYYTYEPYRN 198 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig91.17241.1 >prot_E-siliculosus-1a_M_contig91.17241.1 ID=prot_E-siliculosus-1a_M_contig91.17241.1|Name=mRNA_E-siliculosus-1a_M_contig91.17241.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=287bp MPPTSFGVRRSSPRPALVYSLISASLVLLLVVSARLLPPRTTATAPERRLback to top mRNA from alignment at E-siliculosus-1a_M_contig91:677531..680407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig91.17241.1 ID=mRNA_E-siliculosus-1a_M_contig91.17241.1|Name=mRNA_E-siliculosus-1a_M_contig91.17241.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2877bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:677531..680407- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:677531..680407- >mRNA_E-siliculosus-1a_M_contig91.17241.1 ID=mRNA_E-siliculosus-1a_M_contig91.17241.1|Name=mRNA_E-siliculosus-1a_M_contig91.17241.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1722bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:677531..680407- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |