mRNA_E-siliculosus-1a_M_contig91.17241.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig91.17241.1
Unique NamemRNA_E-siliculosus-1a_M_contig91.17241.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: D8LJS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS5_ECTSI)

HSP 1 Score: 500 bits (1287), Expect = 9.970e-178
Identity = 261/286 (91.26%), Postives = 268/286 (93.71%), Query Frame = 1
Query:    7 PTSFGVRRSSPRPALVYSLISASLVLLLVVSARLLPP-RTTATAPERRLPDIMSEKNEEGVSPQHQQQGG-AYRANRVAAGNDFVKFVLQESVGSDDRDPAEAATWRTLNFGEVADLFKKGLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL 858
            PTSF VRRSSPRPAL+YSLISASLVLLLVVSA LLPP RTTATAPERRLPDIMSEK E+GVSPQ        YRANRVAAGNDFVKFVLQESVGSD RDPAEAATWRTLNF EVADLFKKGLPDCFLES+ EANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASR+ GTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAF+RTAPRDQVV+FFGAVGEGLEDEIASRADETPVWLSTSGLGVYW  LHARLDSVPKYYTYAPFK+L
Sbjct:    2 PTSFRVRRSSPRPALLYSLISASLVLLLVVSAGLLPPTRTTATAPERRLPDIMSEKTEDGVSPQXXXXXXXGYRANRVAAGNDFVKFVLQESVGSDGRDPAEAATWRTLNFREVADLFKKGLPDCFLESMKEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASRK-GTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFLRTAPRDQVVQFFGAVGEGLEDEIASRADETPVWLSTSGLGVYW--LHARLDSVPKYYTYAPFKAL 284          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A6H5L146_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L146_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 6.990e-166
Identity = 241/264 (91.29%), Postives = 251/264 (95.08%), Query Frame = 1
Query:    7 PTSFGVRRSSPRPALVYSLISASLVLLLVVSARLLPPRTTATAPERRLPDIMSEKNEEGVSPQHQQQGGAYRANRVAAGNDFVKFVLQESVGSDDRDPAEAATWRTLNFGEVADLFKKGLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYV 798
            PTSFGV  SSPRPALVYSLISASLVLLLV+SA LLPPRTTAT+P+ RLPDIMSEKNEEGVSPQ QQ+GGAYRANRVAAGNDFVKFVLQESVGSD R PAEAATWRTLNF EVA+LFK+GLPDCFLES+ E NFEAVFWES PVTRTTTDKPYEYVLVDSPRLAAVTADG PFAEHIAS++ GT+DVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYV
Sbjct:    2 PTSFGVCCSSPRPALVYSLISASLVLLLVLSAGLLPPRTTATSPDGRLPDIMSEKNEEGVSPQ-QQKGGAYRANRVAAGNDFVKFVLQESVGSDGRVPAEAATWRTLNFREVAELFKQGLPDCFLESMKETNFEAVFWESVPVTRTTTDKPYEYVLVDSPRLAAVTADGSPFAEHIASKQ-GTDDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYV 263          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A2D6ITT3_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2D6ITT3_9GAMM)

HSP 1 Score: 144 bits (362), Expect = 1.020e-38
Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 1
Query:  319 RTLNFGEVADLFKK--GLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
            R L+  +V  L++   G  D F +++ +  F A FWE  P++  + D P+E V+VDSP L+ VTAD  PF   + +  +  + +  F NL  DA L+ PC G  Q    YAHLA FVR AP      F+  VG  L   +AS+    PVWLSTSGLGVYW  LHARLD  PKYYTYAP++ 
Sbjct:   21 RALSCHDVCSLWQHDTGFVDFFSKTLADMPFSAFFWEVCPISMVSVDTPFECVVVDSPVLSGVTADSGPFGSQLDALHS-PDGIALFENLGGDALLIAPCTG--QGAVAYAHLALFVRHAPLQLQRTFWARVGTALAASLASK----PVWLSTSGLGVYW--LHARLDQYPKYYTYAPYRQ 192          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A4R1HCI6_9GAMM (Uncharacterized protein n=1 Tax=Thiogranum longum TaxID=1537524 RepID=A0A4R1HCI6_9GAMM)

HSP 1 Score: 143 bits (360), Expect = 2.210e-38
Identity = 82/202 (40.59%), Postives = 117/202 (57.92%), Query Frame = 1
Query:  262 VLQESVGSDDRDPAE--AATWRTLNFGEVADLFKKGLPDC--FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
            ++QE +     DP    A     L++ +V + +         F + +  + FEA  WE+ P+TR +  +P+EYVLVDSPRLA  + D   FAEH  +       +VSF NL  DARL+ PC    +P +   HLAAF+R AP + VV+ + +V E     ++S   + P+W+ST GLGVYW  LH RLDSVPKYY YAP+++
Sbjct:    4 MIQEQLQPGSTDPYRITADDGSVLSYAQVIEHWGNNTSFALFFSKQLAASAFEAFLWETPPITRDSLQRPFEYVLVDSPRLARASPDSTAFAEHFETDRGQM--MVSFDNLGGDARLIAPCP--LEPVSACTHLAAFLRQAPANAVVELWRSVSEA----VSSALSDQPLWVSTCGLGVYW--LHVRLDSVPKYYRYAPYQT 195          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A426QJY7_9GAMM (Uncharacterized protein n=1 Tax=Thiohalobacter thiocyanaticus TaxID=585455 RepID=A0A426QJY7_9GAMM)

HSP 1 Score: 141 bits (355), Expect = 1.190e-37
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1
Query:  376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL 858
            F +S+ EA F A FWE+  VT    ++P+E+V V++P L    AD R FA     R  G + +  F NL  DARLV PC     P A YAHL +FVR AP  Q   F+  +GE     ++ R  ++P+WLSTSGLGVYW  LHARLDS PKYYTYA ++++
Sbjct:   47 FNQSLAEAPFAACFWETPAVTHAGLERPFEFVCVEAPSLVGTNADPRAFAAQF-DRHCGEDAIAEFSNLGGDARLVAPCP--VPPNACYAHLLSFVREAPAGQRDAFWRRIGEA----VSQRLSDSPLWLSTSGLGVYW--LHARLDSRPKYYTYAAYRAV 198          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A5J4EAD9_9BACT (Uncharacterized protein n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4EAD9_9BACT)

HSP 1 Score: 137 bits (346), Expect = 2.330e-36
Identity = 74/160 (46.25%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
            F+  VT+A F+A++WE+ PVT  T D+ +E+VLVDS +L  V AD   FA +  S +   +D+V+F NL +DA LVVPC  G      YAHLA F R AP  Q   F+  VG  + + ++ R    P+WLST+G G++W  LH RLDS PKYYT+ P++S
Sbjct:   45 FISLVTQAPFQALYWETPPVTSATFDQEFEFVLVDSSQLRNVRADPLTFASYFESSDVD-DDIVTFWNLGKDALLVVPCPVGSDSA--YAHLAEFTRNAPVAQQHAFWKHVGNAVRERLSDR----PLWLSTAGTGIFW--LHVRLDSRPKYYTHDPYRS 195          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A846AAJ9_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AAJ9_9CYAN)

HSP 1 Score: 137 bits (346), Expect = 3.460e-36
Identity = 70/161 (43.48%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL 858
            F +++    +EA FWE+ P++  T  +P+E  L+DSP+LA VTAD + FA+++ +     ++V +F NL+ D  LVVPCRG QQ    YAHLAAFVR+AP  Q    +  VG  +   + +   + P+W+STSGLGVYW  LH RLD+ PKYY +  ++ +
Sbjct:   56 FTQALAHMPYEAFFWETPPLSEATLQQPFECCLIDSPQLAKVTADPQAFADYLHAERC--DEVQAFPNLKGDTLLVVPCRGSQQQ--QYAHLAAFVRSAPTPQTHALWQVVGRSVA-RLLNEYGQQPLWVSTSGLGVYW--LHVRLDAFPKYYRHPTYQQM 209          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: UPI001880BA32 (hypothetical protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001880BA32)

HSP 1 Score: 136 bits (343), Expect = 6.710e-36
Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  319 RTLNFGEVADLFK--KGLPDCFLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTND-VVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFK 852
            + + + EV  L++  K     F+  + +A F A FWE+  ++  T ++ +E+VLVDSP LA V A+   FA H A+  AG  + +++F NL +DA LVVPC       + Y H+AAF+R AP  Q    + +VG  LE ++    DE P+WLSTSGLGVYW  LH RLDS PKYY+Y P++
Sbjct:   24 KLILYSEVIQLWQHSKDFRTFFISLLADAPFSAFFWETPALSDATINQVFEFVLVDSPNLAGVQANPSDFASHFAA--AGEKESIITFPNLGKDALLVVPCPKAST--STYRHIAAFMREAPTQQKHALWQSVGLALEQKL----DEHPIWLSTSGLGVYW--LHIRLDSYPKYYSYHPYR 194          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A3B0VAL2_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VAL2_9ZZZZ)

HSP 1 Score: 135 bits (339), Expect = 2.360e-35
Identity = 74/160 (46.25%), Postives = 99/160 (61.88%), Query Frame = 1
Query:  376 FLESVTEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
            F+  + +A F+A FWE+ PVTR +  +P+E+VLVD+P+LA V A+ R FA + ++     + VV F NL  DA LVVPC   Q     Y HLA F R AP +Q   F+  VG  + + +  R    P+W+STSGLGVYW  LH RLDS PKY TY P++ 
Sbjct:   45 FIGLLADAPFDAYFWETPPVTRESLQRPFEFVLVDAPQLAQVQAEPRAFASYFSA-----DPVVDFGNLGGDAHLVVPCP--QTAVTAYPHLATFSRLAPIEQQHHFWQRVGTAVSNHVGER----PLWVSTSGLGVYW--LHVRLDSRPKYVTYRPYRE 191          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Match: A0A661FR64_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661FR64_9GAMM)

HSP 1 Score: 135 bits (339), Expect = 2.960e-35
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  373 CFLESV-TEANFEAVFWESAPVTRTTTDKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARLVVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADETPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKS 855
            CF  SV  +A F A FWE+  V+  T D+ +E+VLV+SP+LA +  + R FA   A+     + V+ F NL  DA LVVPC  G  P + Y+ ++ F R AP DQ  + +  VG  LE +++ R    PVWLSTSGLGVYW  +H R DS PKYYTY P+++
Sbjct:   46 CFFVSVLVDAPFPAYFWETPAVSSATIDREFEFVLVESPQLAGIRTNERAFANQFAAARPEAS-VIEFSNLGGDATLVVPCLQG--PISAYSQISTFARLAPADQQHQLWALVGATLEQQLSER----PVWLSTSGLGVYW--IHIRFDSEPKYYTYEPYRN 198          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJS5_ECTSI9.970e-17891.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L146_9PHAE6.990e-16691.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D6ITT3_9GAMM1.020e-3844.75Uncharacterized protein n=1 Tax=Chromatiales bacte... [more]
A0A4R1HCI6_9GAMM2.210e-3840.59Uncharacterized protein n=1 Tax=Thiogranum longum ... [more]
A0A426QJY7_9GAMM1.190e-3747.20Uncharacterized protein n=1 Tax=Thiohalobacter thi... [more]
A0A5J4EAD9_9BACT2.330e-3646.25Uncharacterized protein n=1 Tax=bacterium MnTg04 T... [more]
A0A846AAJ9_9CYAN3.460e-3643.48Uncharacterized protein n=1 Tax=Leptolyngbya sp. S... [more]
UPI001880BA326.710e-3643.09hypothetical protein n=1 Tax=unclassified Coleofas... [more]
A0A3B0VAL2_9ZZZZ2.360e-3546.25Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A661FR64_9GAMM2.960e-3545.68Uncharacterized protein n=2 Tax=Gammaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig91contigE-siliculosus-1a_M_contig91:677531..680407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size861
Model size861
Exons5
Ec32 orthologEc-12_003090.1
Ec32 ortholog descriptionSecreted protein similar to EsV-1-207
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2B3PJ@1,2S91Y@2759
Seed eggNOG ortholog2880.D8LJS5
Seed ortholog evalue5.7e-139
Seed ortholog score500.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig91.17241.1prot_E-siliculosus-1a_M_contig91.17241.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig91 677531..680407 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936452.2841105-CDS-E-siliculosus-1a_M_contig91:677530..6775941622936452.2841105-CDS-E-siliculosus-1a_M_contig91:677530..677594Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 677531..677594 -
1696251085.2616353-CDS-E-siliculosus-1a_M_contig91:677530..6775941696251085.2616353-CDS-E-siliculosus-1a_M_contig91:677530..677594Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 677531..677594 -
1622936452.297717-CDS-E-siliculosus-1a_M_contig91:678029..6781421622936452.297717-CDS-E-siliculosus-1a_M_contig91:678029..678142Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 678030..678142 -
1696251085.2822483-CDS-E-siliculosus-1a_M_contig91:678029..6781421696251085.2822483-CDS-E-siliculosus-1a_M_contig91:678029..678142Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 678030..678142 -
1622936452.314897-CDS-E-siliculosus-1a_M_contig91:678521..6786581622936452.314897-CDS-E-siliculosus-1a_M_contig91:678521..678658Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 678522..678658 -
1696251085.2952151-CDS-E-siliculosus-1a_M_contig91:678521..6786581696251085.2952151-CDS-E-siliculosus-1a_M_contig91:678521..678658Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 678522..678658 -
1622936452.329195-CDS-E-siliculosus-1a_M_contig91:679312..6794091622936452.329195-CDS-E-siliculosus-1a_M_contig91:679312..679409Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 679313..679409 -
1696251085.30638-CDS-E-siliculosus-1a_M_contig91:679312..6794091696251085.30638-CDS-E-siliculosus-1a_M_contig91:679312..679409Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 679313..679409 -
1622936452.3495805-CDS-E-siliculosus-1a_M_contig91:679957..6804071622936452.3495805-CDS-E-siliculosus-1a_M_contig91:679957..680407Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 679958..680407 -
1696251085.3187044-CDS-E-siliculosus-1a_M_contig91:679957..6804071696251085.3187044-CDS-E-siliculosus-1a_M_contig91:679957..680407Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 679958..680407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig91.17241.1

>prot_E-siliculosus-1a_M_contig91.17241.1 ID=prot_E-siliculosus-1a_M_contig91.17241.1|Name=mRNA_E-siliculosus-1a_M_contig91.17241.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=287bp
MPPTSFGVRRSSPRPALVYSLISASLVLLLVVSARLLPPRTTATAPERRL
PDIMSEKNEEGVSPQHQQQGGAYRANRVAAGNDFVKFVLQESVGSDDRDP
AEAATWRTLNFGEVADLFKKGLPDCFLESVTEANFEAVFWESAPVTRTTT
DKPYEYVLVDSPRLAAVTADGRPFAEHIASREAGTNDVVSFRNLRRDARL
VVPCRGGQQPGANYAHLAAFVRTAPRDQVVKFFGAVGEGLEDEIASRADE
TPVWLSTSGLGVYWYVLHARLDSVPKYYTYAPFKSL*
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mRNA from alignment at E-siliculosus-1a_M_contig91:677531..680407-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig91.17241.1 ID=mRNA_E-siliculosus-1a_M_contig91.17241.1|Name=mRNA_E-siliculosus-1a_M_contig91.17241.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2877bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:677531..680407- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGCCGACGTCCTTCGGTGTTCGTCGCTCTTCGCCTCGCCCCGCGCT TGTCTACTCGCTGATCTCTGCCTCGCTGGTGCTTCTCCTGGTGGTGTCGG CCCGACTCTTGCCCCCTAGGACAACGGCGACGGCACCAGAACGGCGACTC CCGGATATCATGAGCGAGAAAAACGAGGAGGGAGTCTCTCCGCAGCACCA GCAGCAGGGGGGGGCGTACCGAGCCAACCGGGTGGCAGCGGGGAACGACT TTGTTAAGTTTGTGCTCCAAGAGAGCGTCGGGAGCGACGACAGAGACCCC GCCGAGGCGGCGACGTGGCGTACCCTGAACTTCGGAGAGGTTGCCGACCT CTTCAAGAAAGGCTTGCCGGACTGTTTCTTGGAGTCCGTGACGGAGGCCA ACTTCGAAGCGGTGTTTTGGGAGTCGGCACCTGTCACAAGGACCACGACG GTGAGGGAGCGGTTTTGATGTTTTGATGCGCACACCCTGCACATTGGTAT GTATGTATGGTGGTAGAATTAGGAGCAGCGGGGCGCAAGGAGCAACGGTT AGCTTCCATTCCACGTATCAGATTTCCCCGCAATACCGCTTGTTGTCATC CCGCACGTGTGTCTGGGGACAGCGCGCCCCCCTCTTTGTATCCGTTGAGG AAGTACGGCGAATGTCGTGTGTGTTTCGGCTTCGTCTGCGAGATACTACA GTAGCACTAGTCTTCACAGGAGCGGGTCAAGGAAAGGTGTGCCGTTGCTT GGGCCATTTCTGAAGTATCGTAAGGCACACGCCTGTAGAGCGCCCACAAT GTGTGTGTGTTTGGAAGCGTCAAGTCGTTGACGAGTGGGAATCAAATCGT CCTGGCTTTCTCGAACTCCAAAGAATGCTTGGTCCATGCTCCAAAACGTG CAAAAACTTGAGATTCAAACAACGACGAACGAGCGCCCCGCCCTCTACTT ATCCATGTGTACAATATCCCTTCTCCGAATCGCTGCCGATTGTTCCAGGA CAAACCGTACGAGTACGTGCTAGTTGACTCTCCAAGGCTGGCGGCGGTGA CGGCAGATGGCCGTCCGTTCGCCGAACACATCGCGTCCCGAGAAGGTGAG GTGCCTGCCGGTGGTCTTAGTGCTGTAGTGCGCTTTTTTCTTTTTTGTTA GGGAAATTAAATACCAACACAGACTACCCGTTCGAAATGTATTAACCTTT CTTGCCGGAGCCATCTATGAACATGTACAGTCGTATCTAGGCCCTCTAGA AGGTGGGTATGCGCCAGACCGATTCACCCGCCCTATAGCGGGCACCCGCC TTATATAACCCGCCTTATTGAGAGCCTATTAATACGACTGTATCAATCTA TCCACCTGCCTGCCTGCCTGCCTGCCTGCCTACCGGTCTCACTGCTGTTA TCTCTACAGGCGCAGTCGATCCCTCTCTCTTGGTCGTCTTCTCTCCTTGT CTCCCTCTCATTCTCTTCTGCCCCCCTTCGATGCCGTACTCCGTTTTCTC GCATTGATTGGGTCGTCCGGCGCAGTTGCAGATTGATTGGAGGTAAACAT AGCACTCCCGTTTTGTTTTGATTCGCCTACGCTTCACAAAAGCAACCTCA CGCTTCCGCGCGTCACAATATCGACCGGTGGCCTAGAACCCAAACCGACA GCAGCGCCCACCACGATACTATTACCACGTAGATACGCGCCATTTTCGTG TCATAAGTTCATGGGGTGACAAGCGATTCGTTTATTGATTATTGCTTAGC AGGCACCAACGACGTGGTTTCCTTCCGAAATCTCCGGAGAGACGCTCGAC TCGTCGTGCCGTGCAGGGGAGGGCAGCAGCCGGGGGCCAACTACGCCCAC CTCGCCGCGTTCGTGCGAACCGCACCTCGCGACCAGGTACCTCTGCTGCT GACCTCCCTTTCTTGTTGGCCGCGCTGGACTGTCTTTTTGCGGTTTGTTG TTTTCCAAGGCGTTTCTGCCTGCCCCAGCGGTGGAAACATGTTTGTTTGT CCTCTCCGTGGGTGGTGCACGAAAGGGTTTCCATCTGTGCGGCGGTTTCA TCTCGTCTCGTGCTGCATTGTTTTTGTGTACACGAACCACGTGTCAACTC TCACGGCGGCCTGTCTTGGGTGTGATTGTTGGCGTTGATACGCAACAGCC GATGCTAGGTGAATCACGCAACAACCCAAAACTACAGTGCTTCTTGGTGC CCGGTTGAAACGTTCATCGGAAGGAACTGCCAGAATTAATTTCCCTGTTA CCAACGCGGTTCCAGGTGGTTAAGTTTTTCGGCGCTGTTGGCGAGGGCCT TGAAGACGAGATCGCCTCCAGAGCTGACGAAACCCCTGTCTGGCTCAGCA CTTCGGGACTCGGAGTATACTGGTACGTGTGCTTTAAGTCAGTGATCCAA GGGCGGGGGGGCGGGGGGGCTGGGGGGGTGCACTTATGTAAATGCATGCC GTAGTCGTTAGACCATTGACCTCGCATCCCTACAATGCCGGGGCGGAGCG GGGGCGGGGGGGTATTCGTCCGTAAGACCGGCGCTGCGGTTCGTGTTCCA ACCACAGAACTAAAGGTGTTTTTTTTAACCCTCCACATAATTATCGTTCA AGAGATAGAGGTCCTCGTCGTTTTACGGCCACCAAACATCTTCAGGACGT GCTTCGGAACAAACGGAAAGACGTGATTCACTCCGATGACACCAAATCGA TTTGCGACACCTCTTTGCACGCTCGAAGCCGGACAGCCCCAGTCTTTGGC TTTGTCAAGCGCTCATGGTCATGTTACCCCCCCCCCCCGCACGTGCCCGC TCTCCGCACGCAGGCTGCACGCGAGGTTGGACTCCGTGCCGAAGTACTAC ACATATGCGCCGTTCAAGTCATTATGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:677531..680407-

>mRNA_E-siliculosus-1a_M_contig91.17241.1 ID=mRNA_E-siliculosus-1a_M_contig91.17241.1|Name=mRNA_E-siliculosus-1a_M_contig91.17241.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1722bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:677531..680407- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCGCCGACGTCCTTCGGTGTTCGTCGCTCTTCGCCTCGCCCCGCGCT
TGTCTACTCGCTGATCTCTGCCTCGCTGGTGCTTCTCCTGGTGGTGTCGG
CCCGACTCTTGCCCCCTAGGACAACGGCGACGGCACCAGAACGGCGACTC
CCGGATATCATGAGCGAGAAAAACGAGGAGGGAGTCTCTCCGCAGCACCA
GCAGCAGGGGGGGGCGTACCGAGCCAACCGGGTGGCAGCGGGGAACGACT
TTGTTAAGTTTGTGCTCCAAGAGAGCGTCGGGAGCGACGACAGAGACCCC
GCCGAGGCGGCGACGTGGCGTACCCTGAACTTCGGAGAGGTTGCCGACCT
CTTCAAGAAAGGCTTGCCGGACTGTTTCTTGGAGTCCGTGACGGAGGCCA
ACTTCGAAGCGGTGTTTTGGGAGTCGGCACCTGTCACAAGGACCACGACG
ATGCCGCCGACGTCCTTCGGTGTTCGTCGCTCTTCGCCTCGCCCCGCGCT
TGTCTACTCGCTGATCTCTGCCTCGCTGGTGCTTCTCCTGGTGGTGTCGG
CCCGACTCTTGCCCCCTAGGACAACGGCGACGGCACCAGAACGGCGACTC
CCGGATATCATGAGCGAGAAAAACGAGGAGGGAGTCTCTCCGCAGCACCA
GCAGCAGGGGGGGGCGTACCGAGCCAACCGGGTGGCAGCGGGGAACGACT
TTGTTAAGTTTGTGCTCCAAGAGAGCGTCGGGAGCGACGACAGAGACCCC
GCCGAGGCGGCGACGTGGCGTACCCTGAACTTCGGAGAGGTTGCCGACCT
CTTCAAGAAAGGCTTGCCGGACTGTTTCTTGGAGTCCGTGACGGAGGCCA
ACTTCGAAGCGGTGTTTTGGGAGTCGGCACCTGTCACAAGGACCACGACG
GACAAACCGTACGAGTACGTGCTAGTTGACTCTCCAAGGCTGGCGGCGGT
GACGGCAGATGGCCGTCCGTTCGCCGAACACATCGCGTCCCGAGAAGGAC
AAACCGTACGAGTACGTGCTAGTTGACTCTCCAAGGCTGGCGGCGGTGAC
GGCAGATGGCCGTCCGTTCGCCGAACACATCGCGTCCCGAGAAGCAGGCA
CCAACGACGTGGTTTCCTTCCGAAATCTCCGGAGAGACGCTCGACTCGTC
GTGCCGTGCAGGGGAGGGCAGCAGCCGGGGGCCAACTACGCCCACCTCGC
CGCGTTCGTGCGAACCGCACCTCGCGACCAGCAGGCACCAACGACGTGGT
TTCCTTCCGAAATCTCCGGAGAGACGCTCGACTCGTCGTGCCGTGCAGGG
GAGGGCAGCAGCCGGGGGCCAACTACGCCCACCTCGCCGCGTTCGTGCGA
ACCGCACCTCGCGACCAGGTGGTTAAGTTTTTCGGCGCTGTTGGCGAGGG
CCTTGAAGACGAGATCGCCTCCAGAGCTGACGAAACCCCTGTCTGGCTCA
GCACTTCGGGACTCGGAGTATACTGGTACGTGTGGTTAAGTTTTTCGGCG
CTGTTGGCGAGGGCCTTGAAGACGAGATCGCCTCCAGAGCTGACGAAACC
CCTGTCTGGCTCAGCACTTCGGGACTCGGAGTATACTGGTACGTGCTGCA
CGCGAGGTTGGACTCCGTGCCGAAGTACTACACATATGCGCCGTTCAAGT
CATTATGAGCTGCACGCGAGGTTGGACTCCGTGCCGAAGTACTACACATA
TGCGCCGTTCAAGTCATTATGA
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