mRNA_E-siliculosus-1a_M_contig91.17240.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: D8LJS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS4_ECTSI) HSP 1 Score: 347 bits (889), Expect = 5.640e-116 Identity = 189/197 (95.94%), Postives = 191/197 (96.95%), Query Frame = 2
Query: 59 MAAMKSVLFLASTALVLLHSSTAFVLPAARVGQRTAARSTPALCTAPGRATRSVTRVQMSAGSADEEEMNSLDKALVAWGVKSPPGEPEIDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNEASADAAE 649
MAAMKSVLFLASTALVLL+SSTAFVLPAARVGQRT ARS+PALCTAPGRATRSVTRV MSAGSADEEEMNSLDKALVAWGVKSPPGEPEIDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEK LFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNEASADA E
Sbjct: 1 MAAMKSVLFLASTALVLLNSSTAFVLPAARVGQRTPARSSPALCTAPGRATRSVTRVHMSAGSADEEEMNSLDKALVAWGVKSPPGEPEIDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEK---LFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNEASADADE 194
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A7S2USK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK8_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.330e-35 Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 2
Query: 251 DEEEMNSLDKALVAWGVKSPPGEPEIDFK---EKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNEASAD 640
D+ E++ D LV G K P E E + EK+KSAGLAGAL+YG EL FW++S PLA++ YHQTTGEW DL++ EGK K + LT GFLTFARL VP RIA ALALTPAMDKYVV+ +K S +
Sbjct: 78 DKVELSGWDNFLVGMGFKEDPNEDEENKMTPIEKVKSAGLAGALSYGAFELLFWVVSTPLAILAYHQTTGEWPDLSSAEGKGK---VLALTTGFLTFARLAVPFRIATALALTPAMDKYVVQKYFSKKNDSEE 207
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: W7T0Q7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0Q7_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.830e-22 Identity = 53/125 (42.40%), Postives = 82/125 (65.60%), Query Frame = 2
Query: 251 DEEEMNSLDKALVAWGVKSPPGEPEID---FKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLL 616
D N++ LV G + P E + D +E+++ GLAG +Y +E+ FW IS+P+ +V +HQ+TGEWLDL+T +G+ K + +AGFLTFAR+ +PLR +A AL PA++KYV++ L+
Sbjct: 88 DSTPSNAITSLLVRLGYQ--PEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAF---SAGFLTFARVALPLRAGVAFALAPALNKYVIRPLV 207
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A7S2SU83_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU83_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.150e-21 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 2
Query: 254 EEEMNSLDKALVAWGVKSPPGEPE---IDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNEASADA 643
+ E++ LD+ L+ GVK P PE +D KIKSAG AG AY TE AFW+IS+PLA+ +TG DL+T EG+ +FG + GFL ARL+VP R+ALALALTP +D+ ++ NE A
Sbjct: 85 DAEVSGLDEWLIGIGVKQDPRIPEEEQVDTMTKIKSAGKAGLAAYAITEGAFWVISIPLAIGAVTASTGTLPDLSTNEGR---IAVFGYSFGFLNIARLLVPFRVALALALTPWVDQNIMSRFGGDNEDETTA 214
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A8J2X2M9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2M9_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 6.460e-20 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 2
Query: 260 EMNSLDKALVAWGVKSPPGEPE---IDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVK 607
+++ LD+ L+ WG+K P PE +D +IK AG AG AY TE AFW+ SVPLA+ TTG D T EGKE + G F+ FAR++VPLRIALALAL P ++ +++
Sbjct: 42 KVSQLDEVLIQWGIKDDPRVPEECRVDPMTRIKEAGKAGVAAYTLTEFAFWLGSVPLAIALVAYTTGSLPDFATTEGKEAVA---GYVFVFINFARVIVPLRIALALALAPWCERNIIE 157
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A7S2CSF4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSF4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.560e-18 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 2
Query: 260 EMNSLDKALVAWGVKSPPGEPE---IDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVV 604
E++ D+ L+ +GVK P PE +D K+K+AG AG ++Y TELAFW+ISVPLA+ TG DL + EG+ GFLTFAR +VP+RIALALA P +D+ ++
Sbjct: 82 EVSDFDEFLIKYGVKDDPRIPEDCRVDTMTKVKNAGTAGIVSYALTELAFWVISVPLAIASVAAATGSLPDLGSQEGQAATGAYI---LGFLTFARAIVPVRIALALAGVPWVDENIM 196
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A4D9CMH7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMH7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.410e-17 Identity = 46/104 (44.23%), Postives = 72/104 (69.23%), Query Frame = 2
Query: 311 PGEPEID---FKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGL 613
P E + D +E+++ GLAG +Y +E+ FW IS+P+ +V +HQ+TGEWLDL+T +G+ K + +AGFLTFAR+ +PLR +A AL PA++KY++ +
Sbjct: 3 PEENDADPRSLRERLQDFGLAGIASYIASEVLFWFISLPIGIVAFHQSTGEWLDLSTSDGQAKVAAF---SAGFLTFARVALPLRAGVAFALAPALNKYLLSNM 103
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A7S4E7C2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7C2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 6.240e-17 Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 2
Query: 254 EEEMNSLDKALVAWGVKSPPGEPE---IDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVK 607
+ E++ D+ L+ WG K P PE +D +IK +G AG +AY TE FW+ SVP A+ + TGE D TT EGK + L G + FARL+VP RIALALA P +D+ +VK
Sbjct: 149 DAEVSDFDEVLIKWGFKEDPRIPEECRVDQMTRIKDSGQAGVIAYAITEAGFWVGSVPFALGAAYVATGEIPDWTTEEGK---TALGGYAFVLINFARLIVPARIALALAFAPWVDENIVK 266
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A0G4GD47_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GD47_VITBC) HSP 1 Score: 85.5 bits (210), Expect = 4.250e-14 Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = 2
Query: 338 EKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNE------ASADAAEVRVHSPTRRSTKIHQDHVRIPLSD 721
EKIK AG+AG ++YG TE+AFW+ S+PLA+ + T G D+ E K ++ +AGFL+ AR +VPLRIA ALALTP + KY+ K A+ D +HS S+ + D L D
Sbjct: 89 EKIKEAGVAGVISYGATEVAFWLTSLPLAIAAFLATFGAIPDMANGEDAAKVAVY---SAGFLSIARALVPLRIAAALALTPLVGKYIKAAQTEKGADDSRAVAADDIRSQPLHSSALLSSSVATDIATASLPD 219
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Match: A0A7R9WF11_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WF11_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 9.590e-14 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 2
Query: 257 EEMNSLDKALVAWGVKSPPGEPEIDFKEK----------IKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKASLLFGLTA-GFLTFARLVVPLRIALALALTPAMDKYVVKGLLNKNE 628
EE ++ A A G+ + E +E+ +K AG+AG ++Y E AFWI+SVP+ V+GY+Q G W D ++ E K G A F+ FAR VPLRI LAL+ TP + + +V +KN+
Sbjct: 61 EEKEAVAGAEAAQGLNIDAADEECVVEEELTETEKLLKQVKDAGVAGFISYAAWEWAFWIVSVPVCVLGYYQVAGHWPDFSSKEDMAKV----GAEAFAFVNFARFAVPLRIGLALSTTPWIQENIVDRFFSKND 191 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig91.17240.1 >prot_E-siliculosus-1a_M_contig91.17240.1 ID=prot_E-siliculosus-1a_M_contig91.17240.1|Name=mRNA_E-siliculosus-1a_M_contig91.17240.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=254bp MAAMKSVLFLASTALVLLHSSTAFVLPAARVGQRTAARSTPALCTAPGRAback to top mRNA from alignment at E-siliculosus-1a_M_contig91:671951..676187+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig91.17240.1 ID=mRNA_E-siliculosus-1a_M_contig91.17240.1|Name=mRNA_E-siliculosus-1a_M_contig91.17240.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4237bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:671951..676187+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:671951..676187+ >mRNA_E-siliculosus-1a_M_contig91.17240.1 ID=mRNA_E-siliculosus-1a_M_contig91.17240.1|Name=mRNA_E-siliculosus-1a_M_contig91.17240.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1524bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:671951..676187+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |