mRNA_E-siliculosus-1a_M_contig91.17207.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig91.17207.1
Unique NamemRNA_E-siliculosus-1a_M_contig91.17207.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A6H5KJ97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ97_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 2.130e-139
Identity = 211/220 (95.91%), Postives = 214/220 (97.27%), Query Frame = 1 
Query:  952 KGRSCDTKDSSSTAPGGVEKKALNLPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDSGGNSQLGF 1611
            KGRSCD   SSSTA GGVE++ALN PNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVA+IFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFL QLEDSGGNSQLGF
Sbjct:  273 KGRSCDPTGSSSTAQGGVEEQALNFPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVADIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLTQLEDSGGNSQLGF 492
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: D7FNW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW0_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 1.100e-124
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 1 
Query: 1048 MLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDSGGNSQLGF 1611
            MLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGML VVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLED GGNSQLGF
Sbjct:    1 MLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLLVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDPGGNSQLGF 188
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A024UQM2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQM2_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.130e-61
Identity = 101/213 (47.42%), Postives = 146/213 (68.54%), Query Frame = 1 
Query:  970 TKDSSSTAPGGVEKKALNLPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDSGGNSQLG 1608
            +K     A G  E + LN    LDPIML ++G   + FVRPNG+VV+YN+D+LV Y ++TG F EPETR+PFSD+ L+ +D  A AAG    SV+AA++  G++ ++K ++D L+GLER T E+VT ML ++E+ D EEGE+RLV ++FP FAD+F Q+ + D  +A QC +HY  +L GPPNRPT D  G  D+++ F+KQ+     +S+ G
Sbjct:   73 SKKKKGNATGKAEPQMLNT---LDPIMLTELGPHTFHFVRPNGMVVVYNVDTLVQYILATGSFAEPETRIPFSDEVLKQLDSAATAAGFKFASVVAAQQQKGKFEQEKIKRDGLLGLERCTGEVVTEMLHIIEDDDAEEGEMRLVMDVFPSFADMFGQLKSNDPEYAAQCHKHYMEYLRGPPNRPTVDASGLFDVVLDFMKQVAAQRSSSRYG 282
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A1V9ZM66_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM66_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.090e-59
Identity = 98/182 (53.85%), Postives = 133/182 (73.08%), Query Frame = 1 
Query: 1030 NELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQ 1575
            N +DPIML ++G   +RFVRPNG VV+YN+DSLV Y ++TGDF EPETR+PF D+ LR +D +A AAGL   SV+AAK+D   + + K ++D L+GLER   E+VT ML+V+E+ D E+GE+RLV EIFP FADL+ Q+   D  +A QC +HY  +L+GPPNRPT DE G   +++ F+ Q
Sbjct:   83 NTVDPIMLTELGPHTFRFVRPNGTVVVYNIDSLVQYILATGDFSEPETRIPFPDEMLRQLDTEATAAGLELGSVVAAKQDKATFEQLKIKRDGLLGLERCAGEVVTEMLQVIEDDDGEDGELRLVMEIFPNFADLYSQLKMNDPDYAAQCHKHYIEYLQGPPNRPTVDESGLYQVVLEFMAQ 264
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A485KK40_9STRA (Aste57867_8354 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK40_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.480e-59
Identity = 98/198 (49.49%), Postives = 142/198 (71.72%), Query Frame = 1 
Query: 1018 LNLPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDSGGNSQLGF 1611
            + + N LDPIML ++G++ +RFVRPNG VV+YN+D+LV Y ++TG+F EPETR+PFSDD L+ ID + K++GL   SV  A++   ++   K ++D L+GLER   E+VT ML ++E+ D EEGE+RLV E+FP FADLF Q+ + D  +A QC +H+  +L GPPNRPT DE G  ++++ F+KQ   +G +S  GF
Sbjct:   76 VQVVNTLDPIMLTELGQNTFRFVRPNGTVVLYNVDTLVQYILATGNFSEPETRIPFSDDILKQIDAEVKSSGLELASVFEAQQQKAKFEALKVKRDGLLGLERCAGEVVTEMLSIIEDEDSEEGEMRLVMEVFPSFADLFGQLKSNDFEYASQCHKHFVEYLHGPPNRPTVDESGLFEVVLDFMKQT--AGKSSSKGF 271
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A067CQT9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQT9_SAPPC)

HSP 1 Score: 209 bits (531), Expect = 3.910e-59
Identity = 101/188 (53.72%), Postives = 134/188 (71.28%), Query Frame = 1 
Query: 1012 KALNLPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQ 1575
            KA +  N +DPIML ++G   +RFVRPNG +V+YN++SLV Y ++TGDF EPETRLPF D  L  +D +AKAAGL   SV AAK+D   + + K ++D L+GLER   E+VT ML V+E+ D EEGE+RLV EIFP FADL+ Q+   D A+A QC +H+  +L+GPPNRPT DE G   I++ F+ Q
Sbjct:   78 KASSGLNTVDPIMLTELGPHTFRFVRPNGTIVVYNIESLVQYILATGDFSEPETRLPFPDAMLAQLDAEAKAAGLELGSVAAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIEDDDGEEGEMRLVMEIFPNFADLYSQLKMNDAAYAAQCHKHFVEYLQGPPNRPTIDESGLYHIVLDFMAQ 265
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A1V9ZCL8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCL8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 4.260e-59
Identity = 101/198 (51.01%), Postives = 136/198 (68.69%), Query Frame = 1 
Query: 1030 NELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDG-------------KAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLED 1584
            N +DPIML ++G   +RFVRPNG VV+YNLDSL+ Y ++TGDF EPETR+PF DD LR +D              +AKAAGL   SV+ AK +  ++ +QK ++D L+GLER   E+VT ML+V+E+ D EEGE+RLV EIFP FADL+ Q+   D  +A QC +HY  +L+GPPNRPT DE G   +++ F+KQ  +
Sbjct:   80 NTVDPIMLTELGPHTFRFVRPNGTVVVYNLDSLIAYILATGDFSEPETRIPFPDDMLRQLDTEVCPRRGTLSVILRAKAAGLELQSVVTAKANKAQFEQQKIKRDGLLGLERCAGEVVTEMLQVIEDEDSEEGEMRLVMEIFPNFADLYSQLKMNDPEYAAQCHKHYLEYLQGPPNRPTVDESGLYQVVVEFMKQTAE 277
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A7S2GAV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAV9_9STRA)

HSP 1 Score: 209 bits (531), Expect = 8.010e-59
Identity = 105/194 (54.12%), Postives = 137/194 (70.62%), Query Frame = 1 
Query: 1036 LDPIMLVKV--GKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDSGGNSQLGF 1611
            +DPIML ++  G   + F RPNG  V+YNL SL+DYF +TGDF EPETR+ FS+  L+ +D  A+ A L+K SVLAAKRDP R+ E  F++DA+ GLER   ELV  ML V+E  D EEG++RLV  +FP F+DL +Q+L+AD  FA  CMQH+ S+L GPPNRPT D  GFL I++ FLKQ+++ G     GF
Sbjct:  109 MDPIMLTEIPPGTVTFDFHRPNGTKVVYNLTSLIDYFNTTGDFSEPETRIEFSESDLKKMDQMAEKAKLNKSSVLAAKRDPARFDEANFKRDAMNGLERCAGELVADMLNVIESNDPEEGQMRLVMYLFPLFSDLHRQLLSADTEFAAMCMQHFVSYLSGPPNRPTHDRFGFLPIVLHFLKQVQE-GAPGDYGF 301
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A6G0XFD0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFD0_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.200e-58
Identity = 98/193 (50.78%), Postives = 135/193 (69.95%), Query Frame = 1 
Query: 1009 KKALNLPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDS 1587
            K+   + N +DPIM  ++G   +RFVRPNG VV+YN+D+LV Y ++TGDF EPETRL FS+D L++ID  AKAAG    SVL A +   ++ + K ++D L+GLER   E+VT ML ++E+ D EEGE+RLV E+FP FADLF Q+ + D  +A QC +HY  +L GPPNRPT DE G  ++++ F+KQ   S
Sbjct:   81 KEEAQVVNTVDPIMFTELGPHTFRFVRPNGTVVLYNVDTLVQYILATGDFSEPETRLAFSEDILKEIDSTAKAAGFKCGSVLEAFQQKAKFDQMKIKRDGLLGLERCAGEVVTEMLHIIEDEDSEEGEMRLVMEVFPSFADLFGQLKSNDPEYASQCHKHYIEYLHGPPNRPTVDESGLFEVVLEFMKQTAKS 273
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BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Match: A0A2D4BJA5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJA5_PYTIN)

HSP 1 Score: 206 bits (523), Expect = 1.230e-57
Identity = 101/190 (53.16%), Postives = 137/190 (72.11%), Query Frame = 1 
Query: 1009 KKALNLPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQL 1578
            K+A N+ N +DPIML ++G   + FVR NG VV+YN+D+LV Y ++TGDF EPETR+PF+D+ LR ID +AK A L + SVL AK +   + EQK ++D L+GLER   E VT ML VVE+ D EEGEI L+  +FP F+ +F+QI AADK +A QCM H++++L GP NRPT D  G L +I+SFL+ +
Sbjct:  102 KRAKNVINTVDPIMLTELGHHTFDFVRRNGSVVVYNVDTLVQYILATGDFSEPETRIPFTDEDLRRIDAEAKRAKLDERSVLEAKYNKHVFDEQKVKRDGLLGLERCAGEYVTKMLGVVEDEDAEEGEIELITVLFPSFSSIFEQIRAADKEYAKQCMNHFKAFLRGPKNRPTTDHSGLLPVILSFLEDV 291
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ97_9PHAE2.130e-13995.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNW0_ECTSI1.100e-12498.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024UQM2_9STRA1.130e-6147.42Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9ZM66_9STRA1.090e-5953.85Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485KK40_9STRA2.480e-5949.49Aste57867_8354 protein n=1 Tax=Aphanomyces stellat... [more]
A0A067CQT9_SAPPC3.910e-5953.72Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZCL8_9STRA4.260e-5951.01Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2GAV9_9STRA8.010e-5954.12Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6G0XFD0_9STRA1.200e-5850.78Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2D4BJA5_PYTIN1.230e-5753.16Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig91contigE-siliculosus-1a_M_contig91:253166..257755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1191
Model size1913
Exons9
Ec32 orthologEc-12_003170.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs293KV@1,2RAHN@2759
Seed eggNOG ortholog2880.D7FNW0
Seed ortholog evalue4.6e-102
Seed ortholog score378.3
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936442.7299545-UTR-E-siliculosus-1a_M_contig91:253165..2532631622936442.7299545-UTR-E-siliculosus-1a_M_contig91:253165..253263Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 253166..253263 +
1696251080.9430761-UTR-E-siliculosus-1a_M_contig91:253165..2532631696251080.9430761-UTR-E-siliculosus-1a_M_contig91:253165..253263Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 253166..253263 +
1622936442.7456286-UTR-E-siliculosus-1a_M_contig91:253479..2535881622936442.7456286-UTR-E-siliculosus-1a_M_contig91:253479..253588Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 253480..253588 +
1696251080.9586742-UTR-E-siliculosus-1a_M_contig91:253479..2535881696251080.9586742-UTR-E-siliculosus-1a_M_contig91:253479..253588Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 253480..253588 +
1622936442.7651-UTR-E-siliculosus-1a_M_contig91:254164..2542461622936442.7651-UTR-E-siliculosus-1a_M_contig91:254164..254246Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 254165..254246 +
1696251080.9706397-UTR-E-siliculosus-1a_M_contig91:254164..2542461696251080.9706397-UTR-E-siliculosus-1a_M_contig91:254164..254246Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 254165..254246 +
1622936442.779352-UTR-E-siliculosus-1a_M_contig91:254911..2549471622936442.779352-UTR-E-siliculosus-1a_M_contig91:254911..254947Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 254912..254947 +
1696251080.9822214-UTR-E-siliculosus-1a_M_contig91:254911..2549471696251080.9822214-UTR-E-siliculosus-1a_M_contig91:254911..254947Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 254912..254947 +
1622936442.798898-UTR-E-siliculosus-1a_M_contig91:255003..2551011622936442.798898-UTR-E-siliculosus-1a_M_contig91:255003..255101Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 255004..255101 +
1696251080.9927592-UTR-E-siliculosus-1a_M_contig91:255003..2551011696251080.9927592-UTR-E-siliculosus-1a_M_contig91:255003..255101Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 255004..255101 +
1622936442.8990746-UTR-E-siliculosus-1a_M_contig91:257456..2577551622936442.8990746-UTR-E-siliculosus-1a_M_contig91:257456..257755Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 257457..257755 +
1696251081.057848-UTR-E-siliculosus-1a_M_contig91:257456..2577551696251081.057848-UTR-E-siliculosus-1a_M_contig91:257456..257755Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig91 257457..257755 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936442.8143306-CDS-E-siliculosus-1a_M_contig91:255101..2555241622936442.8143306-CDS-E-siliculosus-1a_M_contig91:255101..255524Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 255102..255524 +
1696251081.0021563-CDS-E-siliculosus-1a_M_contig91:255101..2555241696251081.0021563-CDS-E-siliculosus-1a_M_contig91:255101..255524Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 255102..255524 +
1622936442.8394032-CDS-E-siliculosus-1a_M_contig91:255553..2559251622936442.8394032-CDS-E-siliculosus-1a_M_contig91:255553..255925Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 255554..255925 +
1696251081.0113513-CDS-E-siliculosus-1a_M_contig91:255553..2559251696251081.0113513-CDS-E-siliculosus-1a_M_contig91:255553..255925Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 255554..255925 +
1622936442.8598435-CDS-E-siliculosus-1a_M_contig91:256128..2562251622936442.8598435-CDS-E-siliculosus-1a_M_contig91:256128..256225Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 256129..256225 +
1696251081.0242708-CDS-E-siliculosus-1a_M_contig91:256128..2562251696251081.0242708-CDS-E-siliculosus-1a_M_contig91:256128..256225Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 256129..256225 +
1622936442.8730397-CDS-E-siliculosus-1a_M_contig91:256556..2567771622936442.8730397-CDS-E-siliculosus-1a_M_contig91:256556..256777Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 256557..256777 +
1696251081.0334585-CDS-E-siliculosus-1a_M_contig91:256556..2567771696251081.0334585-CDS-E-siliculosus-1a_M_contig91:256556..256777Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 256557..256777 +
1622936442.8867285-CDS-E-siliculosus-1a_M_contig91:257378..2574561622936442.8867285-CDS-E-siliculosus-1a_M_contig91:257378..257456Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 257379..257456 +
1696251081.0444572-CDS-E-siliculosus-1a_M_contig91:257378..2574561696251081.0444572-CDS-E-siliculosus-1a_M_contig91:257378..257456Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig91 257379..257456 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig91.17207.1prot_E-siliculosus-1a_M_contig91.17207.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig91 255102..257456 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig91.17207.1

>prot_E-siliculosus-1a_M_contig91.17207.1 ID=prot_E-siliculosus-1a_M_contig91.17207.1|Name=mRNA_E-siliculosus-1a_M_contig91.17207.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=397bp
MHGAVAVAHPRRPKKNKGKACPRPPSSSRRAPGQECYCALQKATRTRINH
WPLRHGHRRHPAPGRNSSSRGETVNEEAAAVAVAVAAAAAAAAAPAAAPP
QLPQPTRPAGSAAAAAMGQNQQRARPRTMSKQVRAPTTPRRQQQQQQQQP
PPPPPRRNGKGKAKARDSSGGSGGGDKGRSCDTKDSSSTAPGGVEKKALN
LPNELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPET
RLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLE
RMTSELVTGMLRVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFAL
QCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDSGGNSQLGF*
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mRNA from alignment at E-siliculosus-1a_M_contig91:253166..257755+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig91.17207.1 ID=mRNA_E-siliculosus-1a_M_contig91.17207.1|Name=mRNA_E-siliculosus-1a_M_contig91.17207.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4590bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:253166..257755+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCAGTTCTTCAGGTGCAGCTGCTTGGCTGGAGGCGAAACTCAGTCCTGCT
CGCGTCCGGCGAAGCACGTGATACCCGGCAGCAGGCCACCACGACCAGGT
ATGCGGCGAAGGAAAGCAGCGCCAGCGCCGGCACGGACGCACAGAAGTCA
GCACTCGTCCCAACTTCAAACACGAAATTACTTTGCCTTTTAGTCTGCGC
ATTGTTTGCGTGCAGCAGAATTACTCTCTCCCTCTCGTAGGACCTTGACA
GCGGCAGCAGCCTTCTCGGCCTCTCTGTGACCCCACCCCCCTGCCTCCTC
TCTCTCTCCAGTAGAGCTGGCAAGCAGCTCGGAAGGAAGGAACACCTCTC
CCCACCACCAGCAGCTTCGAGAAGGCCAAGAGATGGAAACGCGCAATTCT
CCATCTTTGTATCAACTTCAGAGGTGAGCTAAACAGTGTAGTTGCGCCCA
TGCATGCAGCAGCAAGCAGCTTTCTATTCACCAGGCGGCTTCCTCGTCGC
GCCCGGCAGCAACGCTGCTGATACATGGCCCTTACTTTGGGCGTGCCGAG
ATATAGCAAGGTGTGTAGTTCCTTGTATTGCTCTCCGGCCTCACGGCTGA
GAGACAGGGGCGTGGTGCCATTTGAACTGAGATGCGGAATTTTTTCCTGC
TGGTGCTGGTGCTGCTGCGGATGAGTTTGCTGTTCCTCACGTACACATGC
ATTACCCATGGTCTCGGTACATAGGTATCCCCGGTATTCACCATCTCTGC
GAGGGAGACCTCTCTCGGCATCTGTGCTGTGATGGCCACAGCGAAAGCCC
AGACCTTGTGACACAGCAGTCGTCGGTTGTCCTGGTGCTCAACTTGGGGC
TGAATACTCCGCCACCCTGTGGCAAAACCCTTCCCATTTTGAACTGGTGA
CGGTCCGGCAAACTCGCCGCCGATCTGCTGTGTACGTACATACATCAGTT
TGTGCGTGTTCATACGTGTTACCGTCCCTCTGTTCTATTGTCCCGTTAGG
CTGGCCCGGCAAGCTCACATCGGCGCCCATGACTTCTCGGCTATGTCCAA
ACCCGCGCTGTTTGGCCACCTCCGCGCTAACGTGAGTTCTCTGTGCTGGT
TCGTTCAAACCCAGACGTGTGCTGTTGATGTCATACGTATTTGAAGACAC
CCCGCTACAGGTACACTGCTGTAGTTTTTTGGTGGAGAAAGTTGGAACGT
TGGACGCGCCCCAATGGCCAAACTTGGAGGGGCCACAGGTTACTTGATTT
CATTCGCACCTGTGCTTCAACGCTGGAGCGAGCCAAAGTGTCCACACCAC
GTTTCCGCCGAGGGTGCTGTTTCGTGCTGAAAATTCTCATCTTCATCGAT
GGGAACTACTTCAAGATAACAGTCGAGATCGGGCCGATGTCTGGCACTAC
AAGTATAGATAAACGTACTGCTGTACATAGGATATTGTAGACTCACGTGT
TTGCGTACCTCACCACAGTAACAGCAGCGCATACATAGCATGTATTTAAA
ATAGGTGTGTGTGTGTGTGCCTCTCACAAGGAGGACCAGGCCGTATGCTC
ATCATCGGCATAGATTCACGTACATAGCGGCCAAGCGCTAGGGCCTGTCC
CCTGGGTGATTGCCCTCCGGCCGACCTGGCCGCCAGCACTTGCGCACATC
TACATATCTGCTTACTTCCTGTCCACAGTCTAAGCTATGCATATATATAT
GCACTCCACGTGTCTTTATTCACACCCCGGACGGTCCAACGAACAGTACG
ACTACAACCGGTTGGAGCGCGCGCACCACATCGCCCTGAAGCGCGACATT
GGCCGGGGTAAAGAGTGCAGTACCGCCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCGGCAGCACCGGCCGCAGCACCAACATCAACGGCA
AGAGCAGCAAGAAGCGGCAGTGCCTAGCCGGAAGGGATGCACGGAGCGGT
GGCGGTCGCTCATCCCCGTCGGCCGAAGAAGAACAAGGGCAAGGCCTGCC
CCCGGCCTCCATCTTCGTCCAGACGCGCTCCCGGTCAAGAATGCTACTGC
GCGCTGCAGAAGGCAACGCGAACGCGGATCAACCATTGGCCCCTCCGACA
CGGCCATCGGCGTCACCCCGCGCCCGGACGAAACTCAAGCTCGCGGGGGG
AAACGGTAAACGAGGAGGCGGCAGCGGTAGCGGTAGCGGTAGCGGCGGCG
GCGGCGGCAGCGGCAGCACCAGCGGCGGCCCCGCCGCAGCTGCCGCAGCC
GACGCGGCCTGCGGGTTCGGCAGCAGCAGCGGCGATGGGGCAGAACCAGC
AGCGAGCAAGGCCGAGGACGATGTCGAAGCAAGTGAGGGCTCCGACAACA
CCGCGAAGGGCAAGGGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCCGCCGCCGCCGCCGCCACGCCGGAATGGCAAGGGCAA
AGCGAAGGCGAGGGACTCAAGCGGCGGTAGCGGTGGTGGCGACAAGGGAC
GATCTTGCGACACCAAAGATTCCAGCAGCACCGCACCAGGCGGTGTCGAG
AAGAAGGCACTCAACCTCCCGAACGAGCTAGACCCCATCATGCTCGTCAA
GGTCGGGAAGGACCACTACCGTTTCGTGCGACCGAATGGGATCGTTGTCA
TGTACAACCTCGACTCGCTTGTGGACTACTTCATCTCGACCGGGGACTTC
CTGGAACCGGAAACCCGGCTGCCTTTTTCGGACGACCAGCTCCGAGACAT
CGACGGCAAGGTCAGCTTGGTGTTGAAACAACGTGCATCGCGTATGTATG
GGCCGACTCACCCGCGGAGTAGATCCCCCGGGAGGGACGTAAGAACCAGC
AAGGAGCAGCCCTCAAGATCCGTTCTTGCAGTTTTAGCTCACTCTTCCAC
CCTCGGCACCTCATTCGACCCTGCCCCCCTTCCCATCGAATGCATGGACT
AACCCGTCTTCAGGCGAAGGCGGCGGGACTGTCGAAGCCGAGCGTTCTAG
CCGCCAAGCGGGACCCTGGCCGCTACGCCGAGCAGAAGTTCCAGCAGGAC
GCGCTCGTGGGTGAGAAGAGACTGCGGGGGCAAGATCTCACGCCGCGGCT
GTTGTCGGGGCGAAAGTCTTTGGCCGTTTACAGATTTTTTTTTTCTGAAG
TCACCGATGTCGATCGTACTCTCAAGCAAGACAGACGCACATGTCGATTG
TTGTCGGAAAACGAGGCTTCAATCGACACAGCAGTAGTTCAAGGACAAAG
GAGTGTTGTGACCTGGTTCCGCCCCAGTGCAACCGATTCACGAGTGCGTG
CCAAAGCGCTGTCCTCCCGTGTGTTGAGCACAGGCACAACCGACTCTCCC
ACCATTTTTGCTCAACGCGCTCGCTTGTTCCGCGTGCGAAGGCTTAGAGC
GGATGACTTCCGAGCTGGTGACGGGCATGCTTCGGGTCGTGGAGGAATGC
GATCGAGAGGAAGGAGAGATTCGCCTCGTGGCGGAGATCTTCCCCCCCTT
CGCGGACCTGTTCAAGCAGATCCTGGCGGCGGACAAGGCCTTCGCGCTGC
AGTGCATGCAGCACTACAGGTCCTGGCTGGAGGGTCCTCCCAACCGCCCT
ACCGAAGACGAGGTGCGAGCTTAAGGATAAGCGAGCTTAAGGTTAAGCGA
GCTTAAGGTTAAGCGAGCTTAAGGTTAAGCGAGCTTAAGGTTAAGCGAGC
TTAAGGTTAAGCGAGCTTAAGGCTAAGCGAGCTTAAGGTTAAGCGAGCTT
AAGGTTGAGCGCCGGCCGCCGCCGCCGCCACCACCACCACCACCGGTGTT
TGGCCTGCCTGTCTCCGTGCTTGTTTGTTTGTGAGGGCAAGTCTGGGTCG
TTCTCATTTGGGCGGTGTGTTAAAAGGCAGAACGGTTGCCGACCTACTTA
CGATTGTACGCGGGGACTTGAACGGAGAGCATTGAGGGCATAAAGTGCGG
GGAGGCGCTGTCGTTACCGCCGAAAACGGCATTTAGGGTAGAAACCAAAT
ATGCCTTCACGCGTGGTATGAACGAGTTTCTGCAAGTGCTAGCACGGGGC
ACGCGTAGCGTGGAGGTGCGAGGTCGATGGTGGAAGCAGTTAAAGCACTT
TCCATGGAAGCCGTGCTTGGGTCACCCCCCTCAAATCCCGATATTTTCTC
TCCTCCCACCATTCCCATGCGCCCTTCCCACACGCCCCTCCCCTAAAATG
CCGTGTTCCTCAGATGGGTTTCCTGGACATCATCATCAGTTTCCTTAAAC
AGCTTGAAGACTCTGGAGGAAATTCTCAGCTCGGATTTTAAGATTATTCA
TGACGTGCTTGTGGACCGTCTCGCGACTGGTTAGGCCGGTTGGTGGGGCA
GGATCGGCAGGGTCGAAGCGCATCACTTGTCGACAGCAGGGAGAGCTACA
CCCATTCCTGCACTGGCTCGGTTGATATATCTGATGTTGGTGCGGAGAAT
CAAGCTCATCGGCCGCACCGGTGGCGGCGGGCGGCCCAAGCTTGTTTGTT
TTGGGTTTTTGTAGTGGGGTCGGTTCAGTCAGCGAATCACTCGTCTTTCT
TTGATTGTTTTTCCTTGTGAGACTTGTGCCAGAGAGAGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:253166..257755+

>mRNA_E-siliculosus-1a_M_contig91.17207.1 ID=mRNA_E-siliculosus-1a_M_contig91.17207.1|Name=mRNA_E-siliculosus-1a_M_contig91.17207.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2382bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:253166..257755+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCACGGAGCGGTGGCGGTCGCTCATCCCCGTCGGCCGAAGAAGAACAA
GGGCAAGGCCTGCCCCCGGCCTCCATCTTCGTCCAGACGCGCTCCCGGTC
AAGAATGCTACTGCGCGCTGCAGAAGGCAACGCGAACGCGGATCAACCAT
TGGCCCCTCCGACACGGCCATCGGCGTCACCCCGCGCCCGGACGAAACTC
AAGCTCGCGGGGGGAAACGGTAAACGAGGAGGCGGCAGCGGTAGCGGTAG
CGGTAGCGGCGGCGGCGGCGGCAGCGGCAGCACCAGCGGCGGCCCCGCCG
CAGCTGCCGCAGCCGACGCGGCCTGCGGGTTCGGCAGCAGCAGCGGCGAT
GGGGCAGAACCAGCAGCGAGCAAGGCCGAGGACGATGTCGAAGCAAGTGA
GGGCTCCGACAACACCGCGAAGGATGCACGGAGCGGTGGCGGTCGCTCAT
CCCCGTCGGCCGAAGAAGAACAAGGGCAAGGCCTGCCCCCGGCCTCCATC
TTCGTCCAGACGCGCTCCCGGTCAAGAATGCTACTGCGCGCTGCAGAAGG
CAACGCGAACGCGGATCAACCATTGGCCCCTCCGACACGGCCATCGGCGT
CACCCCGCGCCCGGACGAAACTCAAGCTCGCGGGGGGAAACGGTAAACGA
GGAGGCGGCAGCGGTAGCGGTAGCGGTAGCGGCGGCGGCGGCGGCAGCGG
CAGCACCAGCGGCGGCCCCGCCGCAGCTGCCGCAGCCGACGCGGCCTGCG
GGTTCGGCAGCAGCAGCGGCGATGGGGCAGAACCAGCAGCGAGCAAGGCC
GAGGACGATGTCGAAGCAAGTGAGGGCTCCGACAACACCGCGAAGGCAGC
AGCAGCAGCAGCAGCAGCAGCCGCCGCCGCCGCCGCCACGCCGGAATGGC
AAGGGCAAAGCGAAGGCGAGGGACTCAAGCGGCGGTAGCGGTGGTGGCGA
CAAGGGACGATCTTGCGACACCAAAGATTCCAGCAGCACCGCACCAGGCG
GTGTCGAGAAGAAGGCACTCAACCTCCCGAACGAGCTAGACCCCATCATG
CTCGTCAAGGTCGGGAAGGACCACTACCGTTTCGTGCGACCGAATGGGAT
CGTTGTCATGTACAACCTCGACTCGCTTGTGGACTACTTCATCTCGACCG
GGGACTTCCTGGAACCGGAAACCCGGCTGCCTTTTTCGGACGACCAGCTC
CGAGACATCGACGGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCC
GCCGCCGCCACGCCGGAATGGCAAGGGCAAAGCGAAGGCGAGGGACTCAA
GCGGCGGTAGCGGTGGTGGCGACAAGGGACGATCTTGCGACACCAAAGAT
TCCAGCAGCACCGCACCAGGCGGTGTCGAGAAGAAGGCACTCAACCTCCC
GAACGAGCTAGACCCCATCATGCTCGTCAAGGTCGGGAAGGACCACTACC
GTTTCGTGCGACCGAATGGGATCGTTGTCATGTACAACCTCGACTCGCTT
GTGGACTACTTCATCTCGACCGGGGACTTCCTGGAACCGGAAACCCGGCT
GCCTTTTTCGGACGACCAGCTCCGAGACATCGACGGCAAGGCGAAGGCGG
CGGGACTGTCGAAGCCGAGCGTTCTAGCCGCCAAGCGGGACCCTGGCCGC
TACGCCGAGCAGAAGTTCCAGCAGGACGCGCTCGTGGGCGAAGGCGGCGG
GACTGTCGAAGCCGAGCGTTCTAGCCGCCAAGCGGGACCCTGGCCGCTAC
GCCGAGCAGAAGTTCCAGCAGGACGCGCTCGTGGGCTTAGAGCGGATGAC
TTCCGAGCTGGTGACGGGCATGCTTCGGGTCGTGGAGGAATGCGATCGAG
AGGAAGGAGAGATTCGCCTCGTGGCGGAGATCTTCCCCCCCTTCGCGGAC
CTGTTCAAGCAGATCCTGGCGGCGGACAAGGCCTTCGCGCTGCAGTGCAT
GCAGCACTACAGGTCCTGGCTGGAGGGTCCTCCCAACCGCCCTACCGAAG
ACGAGGCTTAGAGCGGATGACTTCCGAGCTGGTGACGGGCATGCTTCGGG
TCGTGGAGGAATGCGATCGAGAGGAAGGAGAGATTCGCCTCGTGGCGGAG
ATCTTCCCCCCCTTCGCGGACCTGTTCAAGCAGATCCTGGCGGCGGACAA
GGCCTTCGCGCTGCAGTGCATGCAGCACTACAGGTCCTGGCTGGAGGGTC
CTCCCAACCGCCCTACCGAAGACGAGATGGGTTTCCTGGACATCATCATC
AGTTTCCTTAAACAGCTTGAAGACTCTGGAGGAAATTCTCAGCTCGGATT
TTAAATGGGTTTCCTGGACATCATCATCAGTTTCCTTAAACAGCTTGAAG
ACTCTGGAGGAAATTCTCAGCTCGGATTTTAA
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