mRNA_E-siliculosus-1a_M_contig91.17191.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17191.1 vs. uniprot
Match: D7FNU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU3_ECTSI) HSP 1 Score: 1038 bits (2684), Expect = 0.000e+0 Identity = 716/841 (85.14%), Postives = 726/841 (86.33%), Query Frame = 1
Query: 1 MSSITVPKTQTWGRSAASSRVESAVVPVMPAATPVQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQARTHQIARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKRIHDKTATAAAWLDLAQAGLLQRERALAAAQSERDRLTAAVEAGRRAVADREALLRGEQETASRSRALAGEVTDEAKALESEVAGLRRDLARKEEERGEAADTLAAIKKHTAETMVRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKAAQEALVAERAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRMKRANAEFSSLMAALSLVFREYDKAVTANRQLELDAAETESALKALSEESQGDLLLLHEKRDRLRASNAELRAAVEADRRRTEELELLFGDSQKGVDEATASISAKQVLVADTKKRLQEGEARLQVKKERKAQALQAAAGDVAAAEVQAQASRARLEQSQTAVIDFDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLATIQEGGAAKLKAAKEAKAARLTSLRDQVRHASHELADLRARGEAAKNVEAALNLKLEARREADQRRAAEAAVAAQEAAKAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPRFATPETRPSNPPSSASGHDAPPYGGRPPARSLSKAATGQPVAAAAA-------ASDWLAVRQVAGGSAQTSGRAGGARGGATSGRSRHLSSDKEV 2502
MSSITVP T+TWGRSAASSRVESAVVPVMPAATP+QRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQAR AESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEA FKQVLADEGHIAS AAALESDLVVFTAEHKRI DKTATAA+WLDLAQAGLLQRER LAAAQSE DRLTAAVEAGRRAVADRE LLRGEQE ASRSRALAGE D+AKALESEVAGLRRDLAR KHTAET VRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKA QEALVAER XXXXXXXXXXXXXX SDRMKRANAEFS+LMAALSLVFREYDKAVTANRQLELDA +TESALKALSEESQGDLLLLHEKRDRLRASNAELRAA EADRRR EELE+L DSQKGVDEATASI+AKQVLVADTKKRLQEGEARLQ KKERK QAL AA G VAAAEVQAQASRARLEQ QTAVI FDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETL TIQEGGAAKLKAAKEAKAARLTSLRDQV HASHELADLR+RGEAAKNVEAALNLKLEARRE QEAAKAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPRFATPETRPSNPPSSASGH APPYGGRPPARSLSKAATGQP ASDWL VRQVAGGSAQTSGR GGARGGATSGRSRHLS+DKEV
Sbjct: 1 MSSITVPTTKTWGRSAASSRVESAVVPVMPAATPIQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQAR------AESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAAFKQVLADEGHIASSAAALESDLVVFTAEHKRIRDKTATAASWLDLAQAGLLQRERTLAAAQSESDRLTAAVEAGRRAVADREGLLRGEQERASRSRALAGEAADDAKALESEVAGLRRDLARXXXXXXXXXXXXXXXXKHTAETTVRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKAGQEALVAERXXXXXXXXXXXXXXXXXKETVDAEVRLLSDQLATADAEIVKAEESVAQA---SDRMKRANAEFSNLMAALSLVFREYDKAVTANRQLELDATDTESALKALSEESQGDLLLLHEKRDRLRASNAELRAAAEADRRRAEELEILLCDSQKGVDEATASIAAKQVLVADTKKRLQEGEARLQAKKERKTQALHAAEGCVAAAEVQAQASRARLEQCQTAVIAFDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGGAAKLKAAKEAKAARLTSLRDQVLHASHELADLRSRGEAAKNVEAALNLKLEARREXXXXXXXXXXXXXQEAAKAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPRFATPETRPSNPPSSASGHYAPPYGGRPPARSLSKAATGQPAXXXXXXXXXXXXASDWLVVRQVAGGSAQTSGRGGGARGGATSGRSRHLSADKEV 832
BLAST of mRNA_E-siliculosus-1a_M_contig91.17191.1 vs. uniprot
Match: A0A6H5KW75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW75_9PHAE) HSP 1 Score: 954 bits (2466), Expect = 0.000e+0 Identity = 831/1052 (78.99%), Postives = 854/1052 (81.18%), Query Frame = 1
Query: 1 MSSITVPKTQTWGRSAASSRVESAVVPVMPAATPVQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQARTHQIARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKRIHDKTATAAAWLDLAQAGLLQRERALAAAQSERDRLTAAVEAGRRAVADREALLRGEQETASRSRALAGEVTDEAKALESEVAGLRRDLARKEEERGEAADTLAAIKKHTAETMVRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKAAQEALVAERAGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRMKRANAEFSSLMAALSLVFREYDKAVTANRQLELDAAETESALKALSEESQGDLLLLHEKRDRLRASNAELRAAVEADRRRTEELELLFG--------------------DSQKGVDEATASISAKQVLVADTKKRLQEGEARLQVKKERKAQALQAAAGDVAAAEVQAQASRARLEQSQTAVIDFDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLATIQEGGAAKLKAAKEAKAARLTSLRDQVRHASHELADLRARGEAAKNVEAALNLKLEARREADQRRAAEAAVAAQEAAKAAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPRFATPETRPSNPPSSASGHDAPPYGGRPPARSLSKAATGQPVAAAAAASDWLAVRQVAGGSAQTSGRAGGARGGATSGRSRHLSSDKEVHTSVEPAARRSRSDNPQSAEAAMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNGSGSXXXS------GRIHGSRRGAEKDHRREXXXXXXXXXXXXXXXXXXXXX-ASXRKXXXXXXXXXXXXXPRSPRPANKEYDLWTDNTLVGDSDFSFF 3075
MSSITVPKT+TWG SSRVESAVVPVMPAATP+QRRTAKKSK SNARATVHLVDS ARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARN AGDA LRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHK I +KTATAA+WLDLAQAGLLQRERA+A AQSE DRLTAAVEAGRR VADREALLRGEQE +SRSRALAGE DEAKALESEVAGLRRDLARKEEE DTLAAIKKHTAE VATKERAKTELDERV+AAQEALVAER Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NAEFS+LMAALSLVFREYDKAVTANRQLELDAAETESALKALSEES+ DLLLLHEKRDRLRASNAELRA VEADRRR EELEL+FG DSQ +DEATASI+AKQVLVADT+KRLQEGEARLQ KKERKAQALQAA G VAAAEVQAQASRARLEQ Q +VI FD+E AAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETL TIQEGGAAKLK AKEAKAARLTSLRDQV HASHELADLR RGE AKN+EAALNLKLEARRE +QR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPRFATPETRPSNPPSSASGH APPYGGR PARSLSKAATGQP AAAA ASDWL VRQVA GSAQT G GGA GGATSGRSRHLS+DKEV+T VEPAARRSRSDN QSAEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S++ XXX RI GSRRGAE+ XXXXXXXXXXXXXXXXXXXXX AS RK PRSPRP+NKEYDLWTDNTLVGDSDFSFF
Sbjct: 1 MSSITVPKTKTWG---ISSRVESAVVPVMPAATPIQRRTAKKSKISNARATVHLVDS--------------------ARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNAAGDASLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKCIRNKTATAASWLDLAQAGLLQRERAIAEAQSESDRLTAAVEAGRRTVADREALLRGEQERSSRSRALAGEAADEAKALESEVAGLRRDLARKEEEGXXXXDTLAAIKKHTAE-----------------------------VATKERAKTELDERVQAAQEALVAERVDQKAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAEFSNLMAALSLVFREYDKAVTANRQLELDAAETESALKALSEESERDLLLLHEKRDRLRASNAELRATVEADRRRAEELELIFGTTHSVVVVDDDGFLVVRGPGDSQNALDEATASIAAKQVLVADTRKRLQEGEARLQAKKERKAQALQAAKGGVAAAEVQAQASRARLEQCQASVIKFDRETAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGGAAKLKVAKEAKAARLTSLRDQVLHASHELADLRTRGETAKNMEAALNLKLEARRE-EQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAPRFATPETRPSNPPSSASGHYAPPYGGRTPARSLSKAATGQP-AAAARASDWLEVRQVARGSAQTFGLGGGAGGGATSGRSRHLSADKEVNTIVEPAARRSRSDNHQSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARASSKPDATSNSXXXXXXXXXXXXXXSRIPGSRRGAEEXXXXXXXXXXXXXXXXXXXXXXXXXXPASGRKGSSKSRSKSPRHRPRSPRPSNKEYDLWTDNTLVGDSDFSFF 998 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig91.17191.1 >prot_E-siliculosus-1a_M_contig91.17191.1 ID=prot_E-siliculosus-1a_M_contig91.17191.1|Name=mRNA_E-siliculosus-1a_M_contig91.17191.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1026bp MSSITVPKTQTWGRSAASSRVESAVVPVMPAATPVQRRTAKKSKNSNARAback to top mRNA from alignment at E-siliculosus-1a_M_contig91:99593..109231- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig91.17191.1 ID=mRNA_E-siliculosus-1a_M_contig91.17191.1|Name=mRNA_E-siliculosus-1a_M_contig91.17191.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=9639bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:99593..109231- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:99593..109231- >mRNA_E-siliculosus-1a_M_contig91.17191.1 ID=mRNA_E-siliculosus-1a_M_contig91.17191.1|Name=mRNA_E-siliculosus-1a_M_contig91.17191.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6156bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:99593..109231- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |