|
|
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17187.1 vs. uniprot
Match: A0A6H5KX34_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX34_9PHAE) HSP 1 Score: 1345 bits (3482), Expect = 0.000e+0 Identity = 803/890 (90.22%), Postives = 820/890 (92.13%), Query Frame = 1
Query: 640 MDKYGHNLEQELDTNESLSEFATLKTWLDEVVAQQRCALGLHTPISAEQGAKFSTFFARPECGGFRHHTSAKIHNMVKKVLTKQFLALLDMQNNPLNFSRVAQIRQRDRVSGLQQYYTSLTGHEFSNEVPCSRDSHHCDTRRLAEGSNHTHPVIIRTPPTDLSLYDALIQVRRECVRLDVVPATGPVHSIDHRCHLLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLKTFSHHHRSEHLRNALDAKDMDRVCVVLESGADPSTELRSGLFPMMAAVLKRSIPVIQRLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIASRHGRRDIAQFLVETLRADKVVGDMKATRALNHRSSVNRGLTPLAIAAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQAFGDRGVYTFADMNAENALRVAEQRMLDAISSGETVEDDSKRNSRTASVASDSSGSRPGPAMASSSSRQVSYAIGGDTRPLSSASSGRRPTSSRKQSEPXXTSTISATATEEEHNQTLPEPLPEVLSESARDGGLSGFLDVTQFQLGQIRSKILLTVSILHEGRAAPDTETDSGHTALISAVYRGQSSSVRSLIQEGADPNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGAYAFERGFADLAQLLAIAAADGHEAAVDWELDRSRREEEEKERQRVQHLMDKEGGVGGDGVPEADLYDWMIRVTKPREAARIADRKLQSEQGSFDQAEPSKHNNNSLSPPRGQQKGRERCPKCTLFVPCLHFAGAKLPDGVAEWSVNQRGASRRANAGGKRLVHARSGNQSVAWWRTLHQAHRDRTLPPRPVERSHSSTPPVAG 3309
MDKYGHNLEQELDTNESL EFATLKTWLDEVVAQQRCALGLHTPISAEQG+KFSTFFARPECGGFR HT AKIHNMVKKVLTKQFLALLDMQNNPLNFS++AQI QRDRVSGLQ N+ RDSHHCDTRRLAEGSNHTHPV+IRTPPTDLSLYDALIQVRRECVRL VVPATGPVHSIDHRC LLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLK FSHHHRSEHLR+ALDAKDMDRVCV+LESGADPSTELRSGLFPM+AAVLKRSIP+IQRLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIASRHGRRDIAQFLVETLRADKVVGDMKATRALNHRSSVNRGLTPLAIAAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQAFGDRGVYTFADMNAENALRVAEQRMLDAISSGETVEDDSKRNSRTASVAS+S GSRPGP M SSSRQVS AI GD XX +SATATEE HNQTLPEPLPEVLSESARDGGLSGFLDVTQFQLGQIRSKILLTVSILHEGRAAPDTE+DSGHTALISA YRGQSSSVRSLIQEGAD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VAGAYAFERGFADLAQLLAIAAADGHEAAVDWELDR RREEEEKER+ VQHLMDK+GGVGGDGVPEADLYDWMIRVTKPRE ARIADRKLQSEQGSFDQAEP KH NNS+SP RGQQKGRERCPKCTLFVPCLHFAGAKLPD VAEWSVNQRGASRRANAGGKRLV+ARSGN+SVAWWRTLHQAHRDRTLPPRPVERS SSTPPVAG
Sbjct: 1 MDKYGHNLEQELDTNESLLEFATLKTWLDEVVAQQRCALGLHTPISAEQGSKFSTFFARPECGGFRQHTPAKIHNMVKKVLTKQFLALLDMQNNPLNFSKIAQIHQRDRVSGLQDQLMESRRSNLHND----RDSHHCDTRRLAEGSNHTHPVVIRTPPTDLSLYDALIQVRRECVRLGVVPATGPVHSIDHRCRLLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLKNFSHHHRSEHLRHALDAKDMDRVCVLLESGADPSTELRSGLFPMIAAVLKRSIPIIQRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIASRHGRRDIAQFLVETLRADKVVGDMKATRALNHRSSVNRGLTPLAIAAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQAFGDRGVYTFADMNAENALRVAEQRMLDAISSGETVEDDSKRNSRTASVASNSGGSRPGPTMTGSSSRQVSSAISGDXXXXXXXXXXXXXXXXXXXXXXXXXXAVSATATEEGHNQTLPEPLPEVLSESARDGGLSGFLDVTQFQLGQIRSKILLTVSILHEGRAAPDTESDSGHTALISAAYRGQSSSVRSLIQEGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAYAFERGFADLAQLLAIAAADGHEAAVDWELDRFRREEEEKERKLVQHLMDKQGGVGGDGVPEADLYDWMIRVTKPRETARIADRKLQSEQGSFDQAEPGKHKNNSVSPSRGQQKGRERCPKCTLFVPCLHFAGAKLPDEVAEWSVNQRGASRRANAGGKRLVYARSGNESVAWWRTLHQAHRDRTLPPRPVERSRSSTPPVAG 886
BLAST of mRNA_E-siliculosus-1a_M_contig91.17187.1 vs. uniprot
Match: A0A836C9T3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T3_9STRA) HSP 1 Score: 256 bits (653), Expect = 6.080e-68 Identity = 165/500 (33.00%), Postives = 247/500 (49.40%), Query Frame = 1
Query: 673 LDTNESLSEFATLKTWLDEVVAQQRCALGLHTPISAEQGAKFSTFFARPECGGFRHHTSAKIHNMVKKVLTKQFLALLDMQN-----NPLNF-SRVAQIRQRDRVSGLQQYYTSLTGHEFSNEVPCSRDSHHCDTRRLAEGSNHTHPVIIRTPPTDLSLYDALIQVRRECVRLDVVPATGPVHSIDHRCHLLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLKTFSHHHRSEHLRNALDAKDMDRVCVVLESGADPSTELRSGLFPMMAAVLKRS-----------IP---------------VIQRLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIASRHGRRDIAQFLVE--TLRADKVVGD--MKATRALNHRSSVNRGLTPLAIAAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQAFGDRGVYTFADMNAENALRVAEQRMLDAISSG 2064
+D N S ++ +K W+ +V+ Q RC LG+H P++ Q F++F+ PECGG++ T + M+K L++QF L+ MQ P + RVA +RQR++V +Q Y S++ F +E+ C+RD++HC++RR+ EGSNHTH +I+ P DLS Y++L+ + EC+ L + P TGPV +DHR LL+ K+A H++Q L ++R Q R P A L T +E LR A++ DM RV +++ GA P+ E R G+FP++AA L R +P I L A A+R R + + E T A G + R LN R++ G+T L +AA RNE MAR L+R GA ++ H G A +HAA A WL++T+A GD G+YT+AD+ AE A+ AE + AI+ G
Sbjct: 1 MDINCSTTDAEKMKAWVQQVMEQMRCKLGVHKPLTPHQVRPFTSFYGGPECGGYKAFTPTAVVKMLKSFLSRQFAVLVSMQEAFTKEGPEGWVKRVALMRQREQVMAIQDCYESVSREPFRHEIECTRDTNHCNSRRICEGSNHTHGIIVTPPSIDLSEYNSLVALVEECMSLGLDPVTGPVTGMDHRAKLLREKLAAHHKRQELAAAARRSMQRRDAARPWVAHELWTAGETQLAETLRIAIEGDDMARVVTLVQRGAPPNLENRWGMFPLLAAGLARDTGRAHTRSPRCLPPSLSKYTKSRRCCAGAIAALAQAGANPDHVNWLGMSALMWAARRGDLVTVNALLEAGATPAAQGGAFGTALHAAARANRAAAVEAMCEHVTRAAGAAPGHAAVAVARLLNVRATAAGGVTALMVAARRRNEGMARLLLRRGADLGIRDHHGFTAADHAAAAKHDKLARWLRDTRACGDGGIYTYADLQAERAIAAAEGELAQAIAQG 500
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 3147 |
| Model size | 3634 |
| Exons | 6 |
| Ec32 ortholog | Ec-12_003390.1 |
| Ec32 ortholog description | Ankyrin repeat |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko01009,ko03400 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | G |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| EggNOG free text desc. | response to abiotic stimulus |
| KEGG ko | ko:K15503 |
| Seed eggNOG ortholog | 2880.D7FNU0 |
| Seed ortholog evalue | 0.0 |
| Seed ortholog score | 1434.9 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936438.1939309-UTR-E-siliculosus-1a_M_contig91:53519..53684 | 1622936438.1939309-UTR-E-siliculosus-1a_M_contig91:53519..53684 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig91 53520..53684 + |
| 1696251078.4494102-UTR-E-siliculosus-1a_M_contig91:53519..53684 | 1696251078.4494102-UTR-E-siliculosus-1a_M_contig91:53519..53684 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig91 53520..53684 + |
| 1622936438.3226445-UTR-E-siliculosus-1a_M_contig91:58297..58619 | 1622936438.3226445-UTR-E-siliculosus-1a_M_contig91:58297..58619 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig91 58298..58619 + |
| 1696251078.5303934-UTR-E-siliculosus-1a_M_contig91:58297..58619 | 1696251078.5303934-UTR-E-siliculosus-1a_M_contig91:58297..58619 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig91 58298..58619 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig91.17187.1 >prot_E-siliculosus-1a_M_contig91.17187.1 ID=prot_E-siliculosus-1a_M_contig91.17187.1|Name=mRNA_E-siliculosus-1a_M_contig91.17187.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1049bp
MMRAADGDLDVEAWRQVDRATQALVPACAPGTLPTDPKHLDAMFVFATNN
WRTYHGEKPTGNKLARINAIHKQATSGDCADTEWSTPFEKTVLRMWHSYR
GTPAIMAKRRFLALLREVDPRLLEIKAYQFSPWGFPTTAKGERICPYSNT
KKGCPRPLMDKYGHNLEQELDTNESLSEFATLKTWLDEVVAQQRCALGLH
TPISAEQGAKFSTFFARPECGGFRHHTSAKIHNMVKKVLTKQFLALLDMQ
NNPLNFSRVAQIRQRDRVSGLQQYYTSLTGHEFSNEVPCSRDSHHCDTRR
LAEGSNHTHPVIIRTPPTDLSLYDALIQVRRECVRLDVVPATGPVHSIDH
RCHLLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLKTFSHHHRSE
HLRNALDAKDMDRVCVVLESGADPSTELRSGLFPMMAAVLKRSIPVIQRL
LAAGADINHGNSKGMTALMWAVKRNDYAMMDALLEEGADVEVEGCSGWTA
MSIASRHGRRDIAQFLVETLRADKVVGDMKATRALNHRSSVNRGLTPLAI
AAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQ
AFGDRGVYTFADMNAENALRVAEQRMLDAISSGETVEDDSKRNSRTASVA
SDSSGSRPGPAMASSSSRQVSYAIGGDTRPLSSASSGRRPTSSRKQSEPR
PTSTISATATEEEHNQTLPEPLPEVLSESARDGGLSGFLDVTQFQLGQIR
SKILLTVSILHEGRAAPDTETDSGHTALISAVYRGQSSSVRSLIQEGADP
NYSNRNGRTALMAAAAAGDPKMVIILLRHKADAARTDIHGKVAGAYAFER
GFADLAQLLAIAAADGHEAAVDWELDRSRREEEEKERQRVQHLMDKEGGV
GGDGVPEADLYDWMIRVTKPREAARIADRKLQSEQGSFDQAEPSKHNNNS
LSPPRGQQKGRERCPKCTLFVPCLHFAGAKLPDGVAEWSVNQRGASRRAN
AGGKRLVHARSGNQSVAWWRTLHQAHRDRTLPPRPVERSHSSTPPVAG* back to topmRNA from alignment at E-siliculosus-1a_M_contig91:53520..58619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig91.17187.1 ID=mRNA_E-siliculosus-1a_M_contig91.17187.1|Name=mRNA_E-siliculosus-1a_M_contig91.17187.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5100bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:53520..58619+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AGCATACAACGTGCGACGTGGGAGTGCGACGGCCGTCATTTCGGCCAGCA
GCATGCGTGAAAGAGGAGCGCATGTGAGGCATACGACGAGCTGAAGAAAT
TTTCGGTCAGCCTGCTCGCTTCTCTCCGAAGGTGTGGCTTTCTTGCCCAA
CTTGTGTCACAGATCATGATGCGGGCAGCCGATGGGGACCTCGACGTCGA
GGCCTGGCGACAGGTAGATCGAGCAACACAAGCCCTGGTTCCTGCCTGCG
CGCCAGGAACCTTGCCCACGGACCCTAAGCATCTAGATGCTATGTTCGTG
TTTGCTACGAATAACTGGCGGACGTACCATGGAGAAAAACCTACTGGAAA
TAAATTGGTGAGAGTGTGTGGGGATTACGTAACGTTCGCTACTTGCTGCA
CAGCGTGGCTCTCTCCGCAACATACATGTGTCATCTACAACGTAGGTGTC
TTGAACCTTGCGCCGCCCGCGCCTTTGCAATACCCAGTTATAAGCTGTGT
ACGCAGCTCTACTTTCGACGTTGCGCTGTTTTGGTGCTTCAGCTGTTCTG
CAAATGTAGCTGATGTTCCCGGTTGGATGATCACATTGATTGCAGATAGG
GGAACCTTCTCTTTTCATTGTTAGAGACACGCGCACGCTCGTCTCTTTTC
GGCCGCGCTACAACAGGCCCGCATCAACGCGATACACAAGCAAGCTACGT
CTGGCGACTGCGCAGACACAGAATGGTCGACACCTTTCGAGAAGACCGTA
TTGAGAATGTGGCACAGCTACCGAGGCACACCAGCGATCATGGCCAAACG
CAGGTTTCTTGCGCTCCTCAGGGAAGTCGATCCTCGCCTCCTCGAGATCA
AGGCGTACCAGTTCTCGCCGTGGGGGTTCCCCACTACCGCAAAGGGCGAA
CGGATATGCCCTTACAGGTGAAAGCTACCGGGCTGGGCACAATCAACCAC
CGGTGTGGCGGTCGAGCTCGCTGTACTTGGTGGCGGATTGTCATTTGATC
ACCCCCCAAAGAAATCGGAACCTTCAGAAGGTGAATGACACCACTGGTTC
TGAAGTTTTTCCTGCCGCATTTTCTTGTACTCCCATCCCCGTAAAACATG
TAGCAACACAAAGAAAGGCTGTCCCAGGCCGCTCATGGACAAGTACGGTC
ACAACCTGGAACAGGAACTTGACACCAACGAGAGTCTTTCGGAGTTCGCG
ACTCTGAAGACGTGGCTGGATGAAGTGGTCGCTCAACAGCGGTGCGCGCT
GGGACTCCACACCCCGATCTCCGCCGAGCAGGGTGCAAAATTCTCCACGT
TTTTCGCTCGGCCAGAATGTGGCGGCTTTCGGCACCATACCTCAGCGAAG
ATCCACAACATGGTCAAGAAGGTACGGTCGCAGGCGGTAGCAGTGTTGTA
GCAAGAAATATACTTTTTGAAAGACCGGGACGTCGTTGACCAGCGATAGT
CGCACCCTACCCCTGATACGCCACACATTCCTCCGGCAACCTTTAGGAAG
CGGAATCGTGCTGTCCATGATTGATGCTCCTCCGGCAGGTGCTGACAAAG
CAGTTTCTGGCTTTACTGGACATGCAGAACAACCCGCTGAACTTCTCCAG
AGTCGCTCAGATTCGTCAGCGAGATCGAGTCTCGGGGCTTCAGGTATGAT
ATGCATGCACAGAATAACGAGTGGGAGGGCGAGGGAGAGGGGGTCAGTTA
TGCCGCAGTGGCACAAGACCGCGATATCACTCGCGGGGCTCAGCAACCTT
GCATTGAGTTTGCTCAACCGGAGCAGTAGCAGCCTGGGTTGGGCGGGTGC
CGAGGTGGCGTGTTGCAGACAGCAAGGTTTAGCTTACCTGTGCTTGCCGT
GGTACTCGACTTGTATAAACACGTATTGGGCACGGGCCCAGAACTATAAG
CAACATGGATTTTGCTCAGGATCAGCTCATGGAATCGCGGAGAAGCAACA
TGCAAAACGATAGGTACAGTTTACCAGGACCGACACCGCATATCTACGAC
AGGGTCGAGGTGGAAGACCATCTGTACAAGCCCACGATGTTTTTTTCTGA
TTTGCTTGCGTTCGCACGGTCTTATACCACTGCCCCCCGCCCCACTGGAT
GTCATCGCAGCAATACTACACCAGCCTGACTGGTCACGAATTCTCCAACG
AGGTGCCCTGTTCTAGGGACTCTCACCACTGCGATACGCGGCGTCTGGCG
GAAGGGAGCAACCACACTCATCCCGTTATCATTCGTACGCCCCCCACGGA
CCTCTCCCTCTACGATGCTCTGATTCAGGTGAAACACTGCTGGCGTTGAT
TGCTGGTTTTACGATCTGAAAAGTTGCTGACTTAGTTTGCCGGTTCACGA
CGTGTTAGCCAGTGACCAAGATCTCGAACGACCAAAGAATTTTCGAGAAT
GAAGACTTTCTGTTGTCTGCCATACGGCCCAGACGGACTTCCGGGTGCGC
TTTTCACCAAATTTGTGATGCAGCCGATTCCTGCGTTTTTATGTTATCCG
GATGCCATCTAATGTTAGCCTTGTCCGTGTACCACCCACGCCTCTCGAGA
GTCTAGTGCCACTAACGATAGCTCATGCCGGTCGTTCGCCTCTCTCGGAC
CTTCTGGCGAAACAGGTGCGGCGCGAATGTGTTCGCCTGGACGTGGTGCC
CGCGACCGGCCCGGTGCACAGCATCGACCATCGCTGCCACCTCCTTCAGA
TGAAGGTGGCCGACTTCCACCGAAAGCAGATGCTCATCTACGAGTCCCAA
CGGCGGCAGCAGTGGCGAATAGACATCGCTCCCCACGATGCAGCCTTGCT
CAAGACCTTTTCTCACCACCACCGATCAGAGCATCTGAGGAACGCGCTGG
ATGCCAAGGACATGGACCGTGTTTGCGTCGTGCTTGAATCGGGAGCCGAC
CCCAGCACCGAACTGCGCAGCGGGCTTTTCCCGATGATGGCCGCCGTCTT
GAAGCGATCCATCCCGGTTATCCAACGACTACTGGCTGCGGGAGCGGATA
TAAACCACGGCAACTCGAAGGGCATGACGGCTCTCATGTGGGCGGTGAAA
CGCAACGACTACGCGATGATGGACGCCCTTCTCGAGGAAGGGGCAGATGT
CGAGGTCGAAGGATGCTCGGGCTGGACGGCGATGAGCATCGCCTCCCGCC
ACGGCAGGAGGGACATCGCGCAGTTCCTCGTAGAGACTCTCCGCGCGGAC
AAGGTCGTCGGCGACATGAAAGCGACCAGGGCGCTGAACCACCGAAGCAG
CGTGAACCGCGGTCTAACGCCGTTGGCGATCGCGGCGATCCACCGAAACG
AGGCCATGGCGCGGTGCCTGATGCGGCTGGGCGCCAAGCCCGCGGTGAAG
TGCCACCAAGGGCACGTGGCCGGAGAGCATGCCGCCAAAGCAGGGTGGGG
CGTTTTCGGCCTCTGGCTGCAGGAGACCCAAGCGTTCGGCGACCGCGGGG
TGTACACGTTCGCGGACATGAACGCGGAGAATGCTCTTCGGGTCGCGGAG
CAGCGAATGCTGGACGCAATTTCGTCCGGCGAAACGGTAGAAGACGACTC
AAAAAGAAACTCTAGGACAGCCTCCGTGGCTTCCGACAGCAGTGGTAGTA
GGCCGGGGCCTGCGATGGCCAGCAGCAGCAGCAGGCAGGTGTCATATGCG
ATTGGCGGCGACACCAGGCCGTTATCGTCTGCGAGTAGCGGCAGGCGGCC
AACGTCTTCGAGAAAACAAAGCGAACCCAGACCGACGTCCACGATTTCTG
CCACGGCAACGGAAGAAGAGCACAACCAAACCCTGCCGGAGCCGCTGCCG
GAGGTGCTTTCCGAGTCAGCTAGAGACGGAGGCCTTTCGGGATTCCTAGA
CGTGACGCAGTTCCAGCTGGGACAGATTCGATCAAAGATCCTCCTAACCG
TCTCGATCTTGCACGAGGGTCGCGCCGCTCCAGACACGGAGACCGACTCC
GGACACACGGCGCTAATCTCCGCTGTGTATCGAGGGCAGTCGAGTTCGGT
GCGTTCGCTCATCCAAGAAGGGGCCGATCCCAACTATTCCAACCGAAACG
GCCGCACCGCGTTGATGGCAGCGGCTGCGGCGGGCGACCCCAAGATGGTG
ATCATTCTCCTGCGGCACAAGGCCGATGCAGCCCGGACGGACATTCACGG
CAAGGTCGCCGGAGCGTACGCGTTCGAGAGAGGCTTCGCGGACCTGGCGC
AGCTGTTGGCCATCGCGGCGGCCGATGGTCACGAGGCGGCCGTCGACTGG
GAGCTCGACAGGTCTCGCCGAGAGGAAGAGGAAAAGGAACGGCAGCGGGT
GCAGCACCTGATGGACAAGGAAGGAGGGGTGGGCGGGGATGGCGTTCCCG
AGGCGGACTTGTACGATTGGATGATTCGAGTCACGAAGCCTAGGGAGGCC
GCCAGGATCGCGGATCGGAAACTCCAGAGCGAACAGGGCAGCTTTGACCA
GGCTGAGCCCAGCAAGCACAACAACAACAGCTTGTCACCCCCACGGGGGC
AGCAAAAAGGCAGGGAACGCTGCCCGAAATGCACTCTCTTCGTACCGTGC
CTTCATTTTGCCGGCGCGAAGCTGCCAGACGGGGTTGCAGAATGGTCCGT
GAACCAGCGAGGCGCCAGCCGCAGGGCCAACGCAGGGGGGAAACGCTTGG
TGCATGCACGGAGTGGCAATCAGAGCGTCGCTTGGTGGAGGACTCTTCAC
CAAGCACACCGAGACCGCACGCTTCCCCCTCGCCCTGTCGAGAGATCGCA
TAGCAGTACACCACCTGTGGCCGGCTGAGCGAAGTCGTTCAGCCTACTTA
CACCCATGCAATAGTACCATATTTCACGTTACGCGTTTGTTTGGACGTGC
TTTGTGTGCGTGTTTTGGTATTTAGACTATGATGTTGTGGTCGCGTTTGG
TGAGTATGGGTTGCTCTCTTAAGATTGCTTGTGGATGGGGCTCCACGTTC
TTTCGCGCTCACAGCGTCCAACAGAAGCAACCAGTGCCTGTATATTTTTG
ACGAAGTAAGGTGTGAACGATGCCACCGTGCCACACAAAATAATACTGTT
GGAGTTTGTGATGAATTGAGGCTCCCGTTGCCACATACTTTCAATACGTG
back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:53520..58619+ >mRNA_E-siliculosus-1a_M_contig91.17187.1 ID=mRNA_E-siliculosus-1a_M_contig91.17187.1|Name=mRNA_E-siliculosus-1a_M_contig91.17187.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6294bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:53520..58619+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGATGCGGGCAGCCGATGGGGACCTCGACGTCGAGGCCTGGCGACAGGT
AGATCGAGCAACACAAGCCCTGGTTCCTGCCTGCGCGCCAGGAACCTTGC
CCACGGACCCTAAGCATCTAGATGCTATGTTCGTGTTTGCTACGAATAAC
TGGCGGACGTACCATGGAGAAAAACCTACTGGAAATAAATTGATGATGCG
GGCAGCCGATGGGGACCTCGACGTCGAGGCCTGGCGACAGGTAGATCGAG
CAACACAAGCCCTGGTTCCTGCCTGCGCGCCAGGAACCTTGCCCACGGAC
CCTAAGCATCTAGATGCTATGTTCGTGTTTGCTACGAATAACTGGCGGAC
GTACCATGGAGAAAAACCTACTGGAAATAAATTGGCCCGCATCAACGCGA
TACACAAGCAAGCTACGTCTGGCGACTGCGCAGACACAGAATGGTCGACA
CCTTTCGAGAAGACCGTATTGAGAATGTGGCACAGCTACCGAGGCACACC
AGCGATCATGGCCAAACGCAGGTTTCTTGCGCTCCTCAGGGAAGTCGATC
CTCGCCTCCTCGAGATCAAGGCGTACCAGTTCTCGCCGTGGGGGTTCCCC
ACTACCGCAAAGGGCGAACGGATATGCCCTTACAGGCCCGCATCAACGCG
ATACACAAGCAAGCTACGTCTGGCGACTGCGCAGACACAGAATGGTCGAC
ACCTTTCGAGAAGACCGTATTGAGAATGTGGCACAGCTACCGAGGCACAC
CAGCGATCATGGCCAAACGCAGGTTTCTTGCGCTCCTCAGGGAAGTCGAT
CCTCGCCTCCTCGAGATCAAGGCGTACCAGTTCTCGCCGTGGGGGTTCCC
CACTACCGCAAAGGGCGAACGGATATGCCCTTACAGCAACACAAAGAAAG
GCTGTCCCAGGCCGCTCATGGACAAGTACGGTCACAACCTGGAACAGGAA
CTTGACACCAACGAGAGTCTTTCGGAGTTCGCGACTCTGAAGACGTGGCT
GGATGAAGTGGTCGCTCAACAGCGGTGCGCGCTGGGACTCCACACCCCGA
TCTCCGCCGAGCAGGGTGCAAAATTCTCCACGTTTTTCGCTCGGCCAGAA
TGTGGCGGCTTTCGGCACCATACCTCAGCGAAGATCCACAACATGGTCAA
GAAGCAACACAAAGAAAGGCTGTCCCAGGCCGCTCATGGACAAGTACGGT
CACAACCTGGAACAGGAACTTGACACCAACGAGAGTCTTTCGGAGTTCGC
GACTCTGAAGACGTGGCTGGATGAAGTGGTCGCTCAACAGCGGTGCGCGC
TGGGACTCCACACCCCGATCTCCGCCGAGCAGGGTGCAAAATTCTCCACG
TTTTTCGCTCGGCCAGAATGTGGCGGCTTTCGGCACCATACCTCAGCGAA
GATCCACAACATGGTCAAGAAGGTGCTGACAAAGCAGTTTCTGGCTTTAC
TGGACATGCAGAACAACCCGCTGAACTTCTCCAGAGTCGCTCAGATTCGT
CAGCGAGATCGAGTCTCGGGGCTTCAGGTGCTGACAAAGCAGTTTCTGGC
TTTACTGGACATGCAGAACAACCCGCTGAACTTCTCCAGAGTCGCTCAGA
TTCGTCAGCGAGATCGAGTCTCGGGGCTTCAGCAATACTACACCAGCCTG
ACTGGTCACGAATTCTCCAACGAGGTGCCCTGTTCTAGGGACTCTCACCA
CTGCGATACGCGGCGTCTGGCGGAAGGGAGCAACCACACTCATCCCGTTA
TCATTCGTACGCCCCCCACGGACCTCTCCCTCTACGATGCTCTGATTCAG
CAATACTACACCAGCCTGACTGGTCACGAATTCTCCAACGAGGTGCCCTG
TTCTAGGGACTCTCACCACTGCGATACGCGGCGTCTGGCGGAAGGGAGCA
ACCACACTCATCCCGTTATCATTCGTACGCCCCCCACGGACCTCTCCCTC
TACGATGCTCTGATTCAGGTGCGGCGCGAATGTGTTCGCCTGGACGTGGT
GCCCGCGACCGGCCCGGTGCACAGCATCGACCATCGCTGCCACCTCCTTC
AGATGAAGGTGGCCGACTTCCACCGAAAGCAGATGCTCATCTACGAGTCC
CAACGGCGGCAGCAGTGGCGAATAGACATCGCTCCCCACGATGCAGCCTT
GCTCAAGACCTTTTCTCACCACCACCGATCAGAGCATCTGAGGAACGCGC
TGGATGCCAAGGACATGGACCGTGTTTGCGTCGTGCTTGAATCGGGAGCC
GACCCCAGCACCGAACTGCGCAGCGGGCTTTTCCCGATGATGGCCGCCGT
CTTGAAGCGATCCATCCCGGTTATCCAACGACTACTGGCTGCGGGAGCGG
ATATAAACCACGGCAACTCGAAGGGCATGACGGCTCTCATGTGGGCGGTG
AAACGCAACGACTACGCGATGATGGACGCCCTTCTCGAGGAAGGGGCAGA
TGTCGAGGTCGAAGGATGCTCGGGCTGGACGGCGATGAGCATCGCCTCCC
GCCACGGCAGGAGGGACATCGCGCAGTTCCTCGTAGAGACTCTCCGCGCG
GACAAGGTCGTCGGCGACATGAAAGCGACCAGGGCGCTGAACCACCGAAG
CAGCGTGAACCGCGGTCTAACGCCGTTGGCGATCGCGGCGATCCACCGAA
ACGAGGCCATGGCGCGGTGCCTGATGCGGCTGGGCGCCAAGCCCGCGGTG
AAGTGCCACCAAGGGCACGTGGCCGGAGAGCATGCCGCCAAAGCAGGGTG
GGGCGTTTTCGGCCTCTGGCTGCAGGAGACCCAAGCGTTCGGCGACCGCG
GGGTGTACACGTTCGCGGACATGAACGCGGAGAATGCTCTTCGGGTCGCG
GAGCAGCGAATGCTGGACGCAATTTCGTCCGGCGAAACGGTAGAAGACGA
CTCAAAAAGAAACTCTAGGACAGCCTCCGTGGCTTCCGACAGCAGTGGTA
GTAGGCCGGGGCCTGCGATGGCCAGCAGCAGCAGCAGGCAGGTGTCATAT
GCGATTGGCGGCGACACCAGGCCGTTATCGTCTGCGAGTAGCGGCAGGCG
GCCAACGTCTTCGAGAAAACAAAGCGAACCCAGACCGACGTCCACGATTT
CTGCCACGGCAACGGAAGAAGAGCACAACCAAACCCTGCCGGAGCCGCTG
CCGGAGGTGCTTTCCGAGTCAGCTAGAGACGGAGGCCTTTCGGGATTCCT
AGACGTGACGCAGTTCCAGCTGGGACAGATTCGATCAAAGATCCTCCTAA
CCGTCTCGATCTTGCACGAGGGTCGCGCCGCTCCAGACACGGAGACCGAC
TCCGGACACACGGCGCTAATCTCCGCTGTGTATCGAGGGCAGTCGAGTTC
GGTGCGTTCGCTCATCCAAGAAGGGGCCGATCCCAACTATTCCAACCGAA
ACGGCCGCACCGCGTTGATGGCAGCGGCTGCGGCGGGCGACCCCAAGATG
GTGATCATTCTCCTGCGGCACAAGGCCGATGCAGCCCGGACGGACATTCA
CGGCAAGGTCGCCGGAGCGTACGCGTTCGAGAGAGGCTTCGCGGACCTGG
CGCAGCTGTTGGCCATCGCGGCGGCCGATGGTCACGAGGCGGCCGTCGAC
TGGGAGCTCGACAGGTCTCGCCGAGAGGAAGAGGAAAAGGAACGGCAGCG
GGTGCAGCACCTGATGGACAAGGAAGGAGGGGTGGGCGGGGATGGCGTTC
CCGAGGCGGACTTGTACGATTGGATGATTCGAGTCACGAAGCCTAGGGAG
GCCGCCAGGATCGCGGATCGGAAACTCCAGAGCGAACAGGGCAGCTTTGA
CCAGGCTGAGCCCAGCAAGCACAACAACAACAGCTTGTCACCCCCACGGG
GGCAGCAAAAAGGCAGGGAACGCTGCCCGAAATGCACTCTCTTCGTACCG
TGCCTTCATTTTGCCGGCGCGAAGCTGCCAGACGGGGTTGCAGAATGGTC
CGTGAACCAGCGAGGCGCCAGCCGCAGGGCCAACGCAGGGGGGAAACGCT
TGGTGCATGCACGGAGTGGCAATCAGAGCGTCGCTTGGTGGAGGACTCTT
CACCAAGCACACCGAGACCGCACGCTTCCCCCTCGCCCTGTCGAGAGATC
GCATAGCAGTACACCACCTGTGGCCGGCTGAGTGCGGCGCGAATGTGTTC
GCCTGGACGTGGTGCCCGCGACCGGCCCGGTGCACAGCATCGACCATCGC
TGCCACCTCCTTCAGATGAAGGTGGCCGACTTCCACCGAAAGCAGATGCT
CATCTACGAGTCCCAACGGCGGCAGCAGTGGCGAATAGACATCGCTCCCC
ACGATGCAGCCTTGCTCAAGACCTTTTCTCACCACCACCGATCAGAGCAT
CTGAGGAACGCGCTGGATGCCAAGGACATGGACCGTGTTTGCGTCGTGCT
TGAATCGGGAGCCGACCCCAGCACCGAACTGCGCAGCGGGCTTTTCCCGA
TGATGGCCGCCGTCTTGAAGCGATCCATCCCGGTTATCCAACGACTACTG
GCTGCGGGAGCGGATATAAACCACGGCAACTCGAAGGGCATGACGGCTCT
CATGTGGGCGGTGAAACGCAACGACTACGCGATGATGGACGCCCTTCTCG
AGGAAGGGGCAGATGTCGAGGTCGAAGGATGCTCGGGCTGGACGGCGATG
AGCATCGCCTCCCGCCACGGCAGGAGGGACATCGCGCAGTTCCTCGTAGA
GACTCTCCGCGCGGACAAGGTCGTCGGCGACATGAAAGCGACCAGGGCGC
TGAACCACCGAAGCAGCGTGAACCGCGGTCTAACGCCGTTGGCGATCGCG
GCGATCCACCGAAACGAGGCCATGGCGCGGTGCCTGATGCGGCTGGGCGC
CAAGCCCGCGGTGAAGTGCCACCAAGGGCACGTGGCCGGAGAGCATGCCG
CCAAAGCAGGGTGGGGCGTTTTCGGCCTCTGGCTGCAGGAGACCCAAGCG
TTCGGCGACCGCGGGGTGTACACGTTCGCGGACATGAACGCGGAGAATGC
TCTTCGGGTCGCGGAGCAGCGAATGCTGGACGCAATTTCGTCCGGCGAAA
CGGTAGAAGACGACTCAAAAAGAAACTCTAGGACAGCCTCCGTGGCTTCC
GACAGCAGTGGTAGTAGGCCGGGGCCTGCGATGGCCAGCAGCAGCAGCAG
GCAGGTGTCATATGCGATTGGCGGCGACACCAGGCCGTTATCGTCTGCGA
GTAGCGGCAGGCGGCCAACGTCTTCGAGAAAACAAAGCGAACCCAGACCG
ACGTCCACGATTTCTGCCACGGCAACGGAAGAAGAGCACAACCAAACCCT
GCCGGAGCCGCTGCCGGAGGTGCTTTCCGAGTCAGCTAGAGACGGAGGCC
TTTCGGGATTCCTAGACGTGACGCAGTTCCAGCTGGGACAGATTCGATCA
AAGATCCTCCTAACCGTCTCGATCTTGCACGAGGGTCGCGCCGCTCCAGA
CACGGAGACCGACTCCGGACACACGGCGCTAATCTCCGCTGTGTATCGAG
GGCAGTCGAGTTCGGTGCGTTCGCTCATCCAAGAAGGGGCCGATCCCAAC
TATTCCAACCGAAACGGCCGCACCGCGTTGATGGCAGCGGCTGCGGCGGG
CGACCCCAAGATGGTGATCATTCTCCTGCGGCACAAGGCCGATGCAGCCC
GGACGGACATTCACGGCAAGGTCGCCGGAGCGTACGCGTTCGAGAGAGGC
TTCGCGGACCTGGCGCAGCTGTTGGCCATCGCGGCGGCCGATGGTCACGA
GGCGGCCGTCGACTGGGAGCTCGACAGGTCTCGCCGAGAGGAAGAGGAAA
AGGAACGGCAGCGGGTGCAGCACCTGATGGACAAGGAAGGAGGGGTGGGC
GGGGATGGCGTTCCCGAGGCGGACTTGTACGATTGGATGATTCGAGTCAC
GAAGCCTAGGGAGGCCGCCAGGATCGCGGATCGGAAACTCCAGAGCGAAC
AGGGCAGCTTTGACCAGGCTGAGCCCAGCAAGCACAACAACAACAGCTTG
TCACCCCCACGGGGGCAGCAAAAAGGCAGGGAACGCTGCCCGAAATGCAC
TCTCTTCGTACCGTGCCTTCATTTTGCCGGCGCGAAGCTGCCAGACGGGG
TTGCAGAATGGTCCGTGAACCAGCGAGGCGCCAGCCGCAGGGCCAACGCA
GGGGGGAAACGCTTGGTGCATGCACGGAGTGGCAATCAGAGCGTCGCTTG
GTGGAGGACTCTTCACCAAGCACACCGAGACCGCACGCTTCCCCCTCGCC
CTGTCGAGAGATCGCATAGCAGTACACCACCTGTGGCCGGCTGA back to top
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