mRNA_E-siliculosus-1a_M_contig91.17184.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: D7FNT6_ECTSI (Derlin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT6_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 8.100e-170 Identity = 247/283 (87.28%), Postives = 257/283 (90.81%), Query Frame = 2
Query: 77 KNMPLGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMPAPGAVRPPRDIPRTGGGSGWGTGRTLGSS 925
KNMPLG NG GG+SPEELFRSIPPVSKVLIVGMVGT+ S+VLGVCSPY+YALSWPLVWNKFHLWRLFTSG+FPG P Y LM M S+GMFS+RYEKDGFSMGGGGGSADYAYMLLFGFV IE SLLLLFYQPFMIFT AIMFYICYVWSRKNPGMSVSFWGI+INALYVPWVM+A+RVVLG SIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWG EGSGVTMQAGG AGMPAPGAVRPPRDIPRTGGGSGWGTGRTLGSS
Sbjct: 17 KNMPLGVFNGSGGSSPEELFRSIPPVSKVLIVGMVGTILSVVLGVCSPYQYALSWPLVWNKFHLWRLFTSGMFPGTPSYETLMLMISMGMFSIRYEKDGFSMGGGGGSADYAYMLLFGFVGIETSLLLLFYQPFMIFTTAIMFYICYVWSRKNPGMSVSFWGIIINALYVPWVMVALRVVLGHSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGHEGSGVTMQAGGXXXXXXXXXXXAGMPAPGAVRPPRDIPRTGGGSGWGTGRTLGSS 299
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A6H5KW67_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW67_9PHAE) HSP 1 Score: 357 bits (915), Expect = 8.310e-119 Identity = 183/190 (96.32%), Postives = 187/190 (98.42%), Query Frame = 2
Query: 356 RYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMPAPGAVRPPRDIPRTGGGSGWGTGRTLGSS 925
RYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGI INALYVPWVMIAMRV +G+SIFMALLGIAVGHLFYFLVDVLPDLH+IDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAG+PAPG VRPPRDIPRTGGGSGWGTGRTLGSS
Sbjct: 10 RYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGIHINALYVPWVMIAMRVAIGASIFMALLGIAVGHLFYFLVDVLPDLHEIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGVPAPGVVRPPRDIPRTGGGSGWGTGRTLGSS 199
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A835YYA5_9STRA (Derlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA5_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.640e-73 Identity = 130/273 (47.62%), Postives = 169/273 (61.90%), Query Frame = 2
Query: 107 GGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMPAPGAVRPPRDIPRTGGGSGWGTG-RTLGS 922
G SPEE F+S+PPVSKVLI +VG+ ++LGV Y AL W + +KF +WRL+T+ +F G P + LM++ G +S+RYEKD F GGGGGSADYA+ML FG + L F PF+ + +MF I YVWSRK P + SFWGI + ++YVPWVM+A ++ G+S F LLGI VGHL+YFLVDV+PD D+L TP FL ++ G+G +GV PAPG PPR PR GGG WG+G R LG+
Sbjct: 11 GAAGSPEEWFKSLPPVSKVLITSLVGSTVLVMLGVIDAYNLALLWSPLRHKFEIWRLYTNAVFLGAPSFPFLMNLMIFGQYSIRYEKDAFDTGGGGGSADYAWMLAFGMAVLSGLSLAFFVVPFL--SIPLMFMIIYVWSRKVPDVPTSFWGITVQSVYVPWVMVAFNLLTGASAFNPLLGIGVGHLYYFLVDVVPDQFGKDVLTTPAFLTDLFGYGGLNTGVQR-----------------FPAPGHAAPPRGFPRPGGGHTWGSGGRPLGT 264
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A6H5KUK6_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK6_9PHAE) HSP 1 Score: 189 bits (480), Expect = 3.980e-54 Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 2
Query: 83 MPLGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRY----EKDGFSMG 385
MPLGFVNGG GNSPEELFRSIPPVSKVLI+GMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPG+PGYGALMS+FSIGMFS+R+ EK F G
Sbjct: 1 MPLGFVNGGSGNSPEELFRSIPPVSKVLILGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGKPGYGALMSIFSIGMFSIRWSGHQEKSFFGAG 105
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A7S2XX42_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX42_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.010e-49 Identity = 102/275 (37.09%), Postives = 165/275 (60.00%), Query Frame = 2
Query: 107 GGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDG-FSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSF-WGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMPAPGAVRPPRDIPRTGGGSGWGTGRTLGSS 925
G G SP++ + S+P ++KV + + ++ G+ L++PL+W KF WRL T+ G+ G+G L++ + + +S +YE G F+ GGGGG +DYA+M++FG V + + PFM + ++F++ YVWSR+ P ++VSF +G+ I ++Y PW +A +++LG+S FMALLGIAVGHL+YFL +++PD +D ++L+TP F+++ G+G T A A G+ G G PA + P GG WG G LG++
Sbjct: 8 GQGGSPQDWYNSVPFITKVWLTSTLAVTLAVNFGILPAGHLFLNFPLIWKKFQFWRLLTNFTCMGKLGFGTLITFYMLYSYSEKYETGGCFNTGGGGGVSDYAFMMMFGMVVMNIIGYFM-NTPFM--AQPLVFFVMYVWSRRFPDLTVSFMFGVKIQSIYAPWAYVAFQILLGNSPFMALLGIAVGHLYYFLAEIVPDQYDFEILKTPVFMIHYFGYGAYHPVNTAPA----AQRGSVNGTGGQPANSSFPMP-------GGRQWGQGHVLGTN 268
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A7S0SWB6_9STRA (Derlin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWB6_9STRA) HSP 1 Score: 169 bits (427), Expect = 4.970e-45 Identity = 96/281 (34.16%), Postives = 160/281 (56.94%), Query Frame = 2
Query: 107 GGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMP------APGAVRPPRD--IPRTGGGSGWGTGRTLGSS 925
G G+S ++ + +IP V+KVLI V + + P + L W +W+KFH+WRLFT +F G + LM + S++YE + ++ GGGG SADY Y++++ V + L++ +Y FMI ++ +M+ I YVWSR+ V+ +G LY+PW+ I + +++G+SI L+GIAVGH +YFL++V+P ++++DL++TP+F ++++ + +G T + +P AP A P R P G G WG GR LG++
Sbjct: 9 GQGDSIQDWYNNIPFVTKVLITSTVVIGGLLTFQLIPPQDLILDWRFIWHKFHIWRLFTPFVFAGSFSFNFLMHTVVLYQNSLKYENNPYNTGGGGSSADYLYLIIYSIVLL---LVIAYYMNFMILSDPLMYVIVYVWSRRESESVVNMYGFKFKGLYLPWIYIGISMLMGNSIVPPLIGIAVGHSYYFLIEVMPTIYNVDLIRTPKFCIDIITYS---TGRTPNV------------LSNIPIPNLAAAPNAGAPVRGNGFPNLGTGHNWGRGRVLGAN 271
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A8J2WZQ4_9STRA (Derlin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZQ4_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.770e-41 Identity = 98/280 (35.00%), Postives = 149/280 (53.21%), Query Frame = 2
Query: 89 LGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFM---IFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMPAPGAVRPPRDIPRTGGGSGWGTGRTLG 919
LG V G N ++ S+PPV++V V GT I G+ PY SWP V ++F +WRL T F G + L++++ + +S YE ++ GGGG +ADY +M+ G +L+L FM +A+++ + YVWSR+NP VS +G + A+ +PW + A +V+G+S+ + L+GI VGHL+YF ++VLPD + +D+++TP+ L++ G A G R GAA PPR GG WG GR LG
Sbjct: 7 LGRVGQGPANPVKDWLESLPPVTRVWFVASFGTTCLISFGLVDPYRLLWSWPAVRHRFEVWRLITPYFFFGGFSFPFLINLYLLQQYSKGYEISPYNTGGGGDTADYIWMMFLG------ALMLCGVSEFMGQVAPAQAMLYLVLYVWSRRNPTQQVSLYGFPVQAIMLPWALCAFNMVIGNSLLLPLMGIGVGHLYYFAIEVLPDAYGVDIVKTPRALIDACGGXXXXXXAV--------APGVR-GAAXXXXXXXXAPPR------GGHNWGGGRVLG 265
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A482RVM1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVM1_9ARCH) HSP 1 Score: 156 bits (394), Expect = 1.270e-40 Identity = 80/212 (37.74%), Postives = 126/212 (59.43%), Query Frame = 2
Query: 113 GNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNML 748
G++ + F S+P ++KV +V + T + + L WP V NKFH WRLFT +F G + + + RYE + F+ G GG SAD+ ++LL + + L+L + + +E +++ I YVWSR+ P ++ WG ALY+PWV IA+R+V+G +I L+G+AVGHL+YFLV VLP H +DL++TP+F V+++
Sbjct: 5 GDTLQGWFSSVPLITKVFLVSTLITGAGLSFKMLDGGSLVLLWPYVQNKFHFWRLFTCFVFAGPFSFNFALHTLVLYENCKRYESNPFNTGAGGNSADFLWLLL---IAMTVLLVLAYIFDMYVLSEPLLYVIMYVWSRREPDAMLNIWGFRFKALYLPWVYIAIRMVMGGAITEPLIGVAVGHLYYFLVQVLPATHGVDLIKTPKFCVDIV 213
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A7S2SNX6_9STRA (Derlin n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNX6_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.340e-40 Identity = 81/224 (36.16%), Postives = 133/224 (59.38%), Query Frame = 2
Query: 83 MPLGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQ-PFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLG 751
M G G GN+P+E F S+PP+++ L+V ++ T + G+ SP++ L W VW F +WRL ++ +F G + L++++ + ++ RYE F+ G GG SAD+A+ML G C ++ F+ PFM + + F I YVW+RKNP S + A Y+PW M+A +++G+ I++ L+GIA GH++YFL P D+++TP F++ +LG
Sbjct: 1 MMRGMGRVGDGNTPQEWFYSLPPITRSLLVAVLATTAACSFGIVSPFQLHLDWTRVWRGFEIWRLASNFVFFGTFSFPFLINLYLLVQYASRYEVSPFNTGAGGSSADFAWMLTIG--CSLLAIASYFFGLPFM--GQPMSFMIMYVWTRKNPDEMTSIFFFKFQAFYLPWAMLAFNLLIGNDIYLPLMGIAAGHVYYFLHYTAPAELGRDIIKTPTFMIELLG 220
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Match: A0A5D6YDW5_9STRA (Derlin n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDW5_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.500e-38 Identity = 95/267 (35.58%), Postives = 136/267 (50.94%), Query Frame = 2
Query: 119 SPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGEPGYGALMSMFSIGMFSMRYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGILINALYVPWVMIAMRVVLGSSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGMPAPGAVRPPRDIPRTGGGSGWGTGRTLG 919
S E F ++P +++ + + LG P L + LVW+KF LWRL TS ++ G G+ LM + + ++ R E+D F GGG +AD+A+ML FG V + + F+ +++F I YVWSR+NP M V+ WG LY+PW +IA V++G + M + G+ GHL+YFL++VLP L+QTP F NM +G+G T P GA P GGG WGTGR LG
Sbjct: 4 SIEAWFHAMPTITRFYLSACFLSTCLSALGFLQPRSLYLDFDLVWHKFQLWRLPTSFMYLGGFGFPFLMQLMILNNYASRLEEDPFPSGGGP-TADFAFMLFFGAVVLWV---IAFFMALPFLGSSLIFMIVYVWSRRNPTMPVAIWGFQFEGLYLPWALIAFTVLMGGNPMMDIFGVIAGHLYYFLLEVLPTTKGWTLIQTPSFFANMFP-SPQGTGAT-------------------PIIGARGPAGAAAAAGGGYTWGTGRPLG 246 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig91.17184.1 >prot_E-siliculosus-1a_M_contig91.17184.1 ID=prot_E-siliculosus-1a_M_contig91.17184.1|Name=mRNA_E-siliculosus-1a_M_contig91.17184.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=282bp MPLGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGTMFSIVLGVCSPYEYAback to top mRNA from alignment at E-siliculosus-1a_M_contig91:21573..25742- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig91.17184.1 ID=mRNA_E-siliculosus-1a_M_contig91.17184.1|Name=mRNA_E-siliculosus-1a_M_contig91.17184.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4170bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:21573..25742- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig91:21573..25742- >mRNA_E-siliculosus-1a_M_contig91.17184.1 ID=mRNA_E-siliculosus-1a_M_contig91.17184.1|Name=mRNA_E-siliculosus-1a_M_contig91.17184.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1692bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig91:21573..25742- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |