mRNA_E-siliculosus-1a_M_contig90.17176.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: D8LGE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE0_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 9.890e-219 Identity = 355/387 (91.73%), Postives = 365/387 (94.32%), Query Frame = 3
Query: 1248 AYVMMVAALVLFALLKLVFEDSIPKGKPTKTSKQVKVSTKKSTSLVKTEAEMAYSSGSAAKYLMGAPSDVSLARSGWMSDSDTDDQWP--EPGARNGSSGPGLFVDSDDEDETRRPSAVSVXXXXTPATAAVKDSELGLLATPSGNDSNGYGSVPAPEEG-----GEXXXXXXXXRWWCRAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLDCVEITKQKSLSRQA 2387
AYVM+VAALVLFALLKLVFEDSIP GKPTKTSKQVKVSTKKST LVKTEAEMAYSSGSAAKYLMGAPSDVSLARSGWMSDSDTDDQWP E GARNGSSGPGLFVDSDDEDETRR SAVS TP+TAAV+DSELGLLATPSGN+SNGYGSVPA +EG GEXXXXXXXXRWWCRAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGS FATFGSIGV SLLSMRLICRYLNDVQIVLGGMGVM+VACLMFVR PEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQ+LGTS LFMVLVGTLSITAAILFAFR+ YLDCV+ITK+KSLSRQA
Sbjct: 169 AYVMIVAALVLFALLKLVFEDSIPNGKPTKTSKQVKVSTKKSTPLVKTEAEMAYSSGSAAKYLMGAPSDVSLARSGWMSDSDTDDQWPPAELGARNGSSGPGLFVDSDDEDETRRLSAVSATTTPTPSTAAVRDSELGLLATPSGNNSNGYGSVPAAKEGAAGEGGEXXXXXXXXRWWCRAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSIFATFGSIGVVSLLSMRLICRYLNDVQIVLGGMGVMIVACLMFVRSPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQELGTSKLFMVLVGTLSITAAILFAFRRRYLDCVDITKRKSLSRQA 555
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: A0A6H5KUL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL2_9PHAE) HSP 1 Score: 644 bits (1661), Expect = 2.550e-215 Identity = 347/387 (89.66%), Postives = 354/387 (91.47%), Query Frame = 3
Query: 1248 AYVMMVAALVLFALLKLVFEDSIPKGKPTKTSKQVKVSTKKSTSLVKTEAEMAYSSGSAAKYLMGAPSDVSLARSGWMSDSDTDDQWP--EPGARNGSSGPGLFVDSDDEDETRRPSAVSVXXXXTPATAAVKDSELGLLATPSGNDSNGYGSVPAPEEG----GEXXXXXXXXRWWCRAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLDCVEITKQKSLSRQAA 2390
AYVM+VAAL+LF LLKLVFEDSIPKGK TKTSKQVK STKKST LVKTEAE+AYSSGSAAKYLMGAPS+VSLARSGWMSDSDTDDQWP EPGARNGSSGPGLFVDSDDEDETRRPS VS T ATA V+DSE GLLA PSGNDSNGYGSVPAPEEG G RWWCR PTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGV SLLSMRLICRYLNDVQIVLGGMGVM+VACLMFVR+PEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTS LFMVLVGTLSITAAILFAFRK YLDCVEITKQKSLSRQAA
Sbjct: 343 AYVMVVAALLLFTLLKLVFEDSIPKGKSTKTSKQVKASTKKSTPLVKTEAEIAYSSGSAAKYLMGAPSEVSLARSGWMSDSDTDDQWPPAEPGARNGSSGPGLFVDSDDEDETRRPSTVSATTPKT-ATAMVQDSEQGLLAAPSGNDSNGYGSVPAPEEGAGEEGGEEELRREERWWCRTPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVVSLLSMRLICRYLNDVQIVLGGMGVMIVACLMFVRNPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSKLFMVLVGTLSITAAILFAFRKRYLDCVEITKQKSLSRQAA 728
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: D8LI50_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI50_ECTSI) HSP 1 Score: 282 bits (722), Expect = 5.510e-79 Identity = 188/420 (44.76%), Postives = 236/420 (56.19%), Query Frame = 3
Query: 1248 AYVMMVAALVLFALLKLVFEDSIPKGKPTKTSKQVKVSTKKSTSLVKTEAEMAYSSGSAAKYLMGAPSDVSLAR------SGWMSDSDT------DDQWP------------EPGARNGSSGP----GLFVD---------SDDEDETRRPSAVSVXXXXTPATAAVKDSELGLLAT--PSGNDSNGYGSVPAPEEGGEXXXXXXXXRWWCRAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLDCVEITKQKSLSRQAA 2390
A+ + + VLF LL VF+D I + KP KT+ S+AK L G S V+L SG +SD D D WP + G R G P G +VD SDD+ A AA + G+ AT S +G V E + R P+ ++LIYGGFLLN+STKGTI+CFET+GA YA+T F +TSAEAGS FAT G+IGV +LLSMRL+C++ ND+Q+VLGGM +M+V C M P GL +F+ AVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGAL+GWFGSAG+LAR FPV+AGV+ Q GTS LF+ LV LS+T A+LF FR+PYLDC++IT ++ + AA
Sbjct: 264 AFFVAAMSTVLFLLLWFVFQDGIEQ-KPAKTT-------------------------SSAKELSGTASGVTLTTDLGSDDSGCLSDDDDVPNQEQQDLWPAAEYSPPGSVSSDSGGRTGRGSPPSVVGQYVDISRDGGWGGSDDKGMEDVEDGYQTGLAAAAAGAAAAGNRAGVQATFHDSVQHEAKHGDVVGRETATLGEGGWLARKLRLRLPSRGDMLIYGGFLLNVSTKGTISCFETIGAAYAITTFSLTSAEAGSVFATCGAIGVVALLSMRLLCKHFNDIQLVLGGMSLMIVTCAMLALPPT-FIGLNVFIAAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALMGWFGSAGALARTCFPVLAGVLCQVFGTSALFLFLVALLSVTFALLFTFRRPYLDCIDITNRRKAAVGAA 656
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: D8LI51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI51_ECTSI) HSP 1 Score: 259 bits (662), Expect = 5.310e-73 Identity = 126/209 (60.29%), Postives = 165/209 (78.95%), Query Frame = 3
Query: 1764 RAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLDCVEITKQKSLSRQAA 2390
R P+ ++ IYGGFLLN+STKGTI+CFET+GA YA+T F +T+AEAGS FA G+IGV +LLSMRL+C++ ND+Q+VLGG+ +M+V C M P GL +F+ AVFL+YS+GYPIGHTAVL LFSK+VG QPQG L+GWFGSAG+++R FPV+AGV+ + LGTS LF+ LV LS+ A+LF FR+PYLDC+EIT ++ + AA
Sbjct: 234 RLPSRGDMHIYGGFLLNVSTKGTISCFETIGAAYAITTFSLTNAEAGSIFAACGAIGVVTLLSMRLLCKHFNDIQLVLGGVSLMIVTCAMLALPPT-FIGLHVFIAAVFLVYSIGYPIGHTAVLALFSKMVGTQPQGTLMGWFGSAGAISRASFPVLAGVLCEVLGTSALFLFLVAMLSVPIALLFTFRRPYLDCIEITNRRKAAVGAA 441
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: D7FUX3_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX3_ECTSI) HSP 1 Score: 256 bits (653), Expect = 2.770e-70 Identity = 122/204 (59.80%), Postives = 162/204 (79.41%), Query Frame = 3
Query: 1758 WCRAPTASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLDCVEITKQK 2369
W R P+ ++LIYGGFLLN+STKGTI+CFET+GA YA+ +F +T+AEAGS FA G+IGV +LLSMRL+C++ ND+Q+VLGG+ +M+V C M P GL +F+ AVFL+YS+GYPIGHTAVL LFSKVVGAQPQG L+GWFGSAG+++R FPV+AGV+ + GTS LF+ L LS+T A++F FR+PYLD +E+ ++
Sbjct: 361 WLRLPSRGDMLIYGGFLLNVSTKGTISCFETIGAAYAIINFSLTNAEAGSIFAACGAIGVVTLLSMRLLCKHFNDIQLVLGGVSLMIVTCAMLALPPT-FIGLHVFIAAVFLVYSIGYPIGHTAVLALFSKVVGAQPQGTLMGWFGSAGAISRASFPVLAGVLCEVFGTSALFLFLGALLSVTFALVFTFRRPYLDWIEVPNRR 563
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: A0A835YNN7_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN7_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.080e-46 Identity = 98/196 (50.00%), Postives = 135/196 (68.88%), Query Frame = 3
Query: 1776 ASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVA-CLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLD-CVEI 2357
A I FLLN++TKGTIAC+ETLGA YA++ G++ G+ FA FG++GVA+L+SMR +CR NDVQ+++GG+ VM+ + L+ G +G F+ ++FL YSVGYPIGHT+VLGLFSKVVG +PQG L G F SAGS+ARI FP++AGVI++ +F VL L+ T + A+R +L C E+
Sbjct: 279 ALRAAILACFLLNVATKGTIACYETLGASYAVSALGLSHGNIGAFFAAFGALGVAALVSMRWLCRVFNDVQLIVGGVAVMLASTALLLDAGAPGRAGDIAFVVSIFLQYSVGYPIGHTSVLGLFSKVVGKRPQGTLQGLFASAGSVARIAFPILAGVIAELSSEHVVFAVLCVVLTTTILAVVAYRNTFLQYCREV 474
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: A0A4D9CYB7_9STRA (MFS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYB7_9STRA) HSP 1 Score: 179 bits (454), Expect = 2.010e-45 Identity = 97/186 (52.15%), Postives = 135/186 (72.58%), Query Frame = 3
Query: 1788 LIYGGFLLNMSTKGTIACFETLGAEYAMTHF-GMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYL 2342
+IYGG LLN++TKGTIA +ETLG ++A +HF GMT+ +AG FA+FG +GV +LL M+ +C+ NDVQ++LGGM VM+VA + + PE +L A+FLMY+VGYP+GHTA +GLFSK++G +PQG L+G FGSAGSLAR+ FP++ G I+++L + LF LS +A IL R+ L
Sbjct: 207 VIYGGILLNVATKGTIAIYETLGIQFATSHFRGMTAPDAGFLFASFGLVGVIALLYMKALCKRFNDVQLILGGM-VMMVASELLMIGPETFPVWRFYL-AIFLMYAVGYPVGHTAAIGLFSKILGKRPQGYLMGVFGSAGSLARVIFPILGGHIAEQLSDNALFSSAAVFLSFSAVILLLAREEVL 390
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: A0A836C8M5_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M5_9STRA) HSP 1 Score: 181 bits (458), Expect = 9.700e-45 Identity = 95/194 (48.97%), Postives = 131/194 (67.53%), Query Frame = 3
Query: 1776 ASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGAS-GLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAAILFAFRKPYLDCVE 2354
++E I G FLLN++ KG IA +ETLGA YA+ ++ A AG FATFG+ GV +LLSM + R NDVQ+++GG VM+++C + V +G G F+ ++FL YS+GYPIGH+AVLG+FSK+VG + QGAL G F SAGS+ARI FP+ G ++Q LG +F +L LS+T IL +R+ YL E
Sbjct: 334 SAEAAILGAFLLNVACKGVIATYETLGANYAINTLSLSPASAGLFFATFGAGGVVALLSMGALSRRFNDVQLIVGGAVVMLLSCALLVVPTQGGGLGYAGFVASIFLQYSIGYPIGHSAVLGMFSKIVGKRAQGALQGLFASAGSVARIAFPLAVGTVAQLLGVHVVFALLCVVLSVTIVILLVYRRTYLAYCE 527
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: A0A7S1ZB43_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB43_TRICV) HSP 1 Score: 180 bits (456), Expect = 2.890e-44 Identity = 88/177 (49.72%), Postives = 129/177 (72.88%), Query Frame = 3
Query: 1773 TASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMFVRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSI 2303
T + I G LLN++TKG+IA FETLG +A HF +++++AG+ AT GSIGV SLL M + +YL+DVQ+++GGM +M++ L V + + +++A+FL+YS+GYPIGHTAV+GLFSK+VG +PQG LLGWF SAGSLAR+ FP+++G ++ G S +F+VL L++
Sbjct: 364 TVYDACILGCMLLNVATKGSIASFETLGIAFAEGHFNLSASQAGTIVATCGSIGVVSLLCMGQLAKYLSDVQMIVGGMLIMIIGVLSIVGMEADENSVWRYMFAIFLIYSIGYPIGHTAVIGLFSKIVGRRPQGTLLGWFASAGSLARMMFPIMSGYVADSQGMSAVFLVLTVVLAL 540
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Match: A0A7S4AKJ6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKJ6_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.350e-43 Identity = 93/181 (51.38%), Postives = 127/181 (70.17%), Query Frame = 3
Query: 1773 TASEVLIYGGFLLNMSTKGTIACFETLGAEYAMTHFGMTSAEAGSTFATFGSIGVASLLSMRLICRYLNDVQIVLGGMGVMVVACLMF-VRDPEGASGLPLFLWAVFLMYSVGYPIGHTAVLGLFSKVVGAQPQGALLGWFGSAGSLARIGFPVVAGVISQKLGTSTLFMVLVGTLSITAA 2312
T + I G LLN+STKG+I+ FETLG A +HF M+S+ AG AT GSIGV +LLSM + R+L+D+Q++ GGMG+M L + + + F A+FL+YSVGYPIGHTAV+GLFSK+VG +PQGALLGWF SAGSLAR+ FP+++G ++ G S++F VL+ L ++ A
Sbjct: 297 TVYDCCILGCMLLNVSTKGSISAFETLGVSIAQSHFDMSSSRAGVIVATCGSIGVVALLSMGHMARFLSDIQLICGGMGIMCFGVLSLGFLEKDVINPSWKFCTAIFLIYSVGYPIGHTAVIGLFSKIVGRRPQGALLGWFASAGSLARLCFPIMSGYLTNFFGVSSVFYVLLCVLPLSIA 477 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig90.17176.1 >prot_E-siliculosus-1a_M_contig90.17176.1 ID=prot_E-siliculosus-1a_M_contig90.17176.1|Name=mRNA_E-siliculosus-1a_M_contig90.17176.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=396bp MMVAALVLFALLKLVFEDSIPKGKPTKTSKQVKVSTKKSTSLVKTEAEMAback to top mRNA from alignment at E-siliculosus-1a_M_contig90:674822..681120- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig90.17176.1 ID=mRNA_E-siliculosus-1a_M_contig90.17176.1|Name=mRNA_E-siliculosus-1a_M_contig90.17176.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6299bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:674822..681120- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig90:674822..681120- >mRNA_E-siliculosus-1a_M_contig90.17176.1 ID=mRNA_E-siliculosus-1a_M_contig90.17176.1|Name=mRNA_E-siliculosus-1a_M_contig90.17176.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2376bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:674822..681120- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |