mRNA_E-siliculosus-1a_M_contig90.17172.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE) HSP 1 Score: 403 bits (1035), Expect = 1.020e-130 Identity = 208/241 (86.31%), Postives = 216/241 (89.63%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDA-RVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
MARV VICATPEALKEAYLA+MGLP + +VLRVKNGFNSDWMPSGYRDVKLNPVVNDH+CEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYD AEESHRELL DAENDA RVAED+DSKESR+ALLRVNAARARLALVLEKQGK+ EADPLYLRAIEVAEK+LGRDHPDLATS NNRAELL
Sbjct: 157 MARVAVICATPEALKEAYLAIMGLP------------------EANVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHRELLGDAENDAARVAEDHDSKESRQALLRVNAARARLALVLEKQGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAELL 379
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: D8LGD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD7_ECTSI) HSP 1 Score: 372 bits (955), Expect = 1.060e-121 Identity = 184/203 (90.64%), Postives = 192/203 (94.58%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGK 609
M RVTVICATPEALKEAYLA+M LP LGGVRLR VSQ GPGN QQD+LRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTT+MRGEDL+KN+SPEVMKEMMRLAGQNWRETGFCLPDLQ AAGQYDLAEESHR+L + AENDARVAEDYDSKESRRALLR NAARARLALVLEKQ +
Sbjct: 1 MTRVTVICATPEALKEAYLAIMELPKLGGVRLRPVSQSGPGNPQQDILRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTDMRGEDLWKNLSPEVMKEMMRLAGQNWRETGFCLPDLQRAAGQYDLAEESHRKLPKGAENDARVAEDYDSKESRRALLRANAARARLALVLEKQAR 203
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE) HSP 1 Score: 314 bits (805), Expect = 5.980e-92 Identity = 160/240 (66.67%), Postives = 187/240 (77.92%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
MARVTVICATPEALKEAYLA+M LP +VLRVKNGFNSDWMPSGYRDVKLNPVVNDH+CEIQLHLR FF LKGGQH VYEWARELNVTT+MR +DLFKN+SPEV +EM+RLAGQNW T + LPD+QL AGQYDLAE+SHR+ L DAE++AR ED+DS+ESRRA+ N AR+RLA VLEKQGK+ EA+ +Y ++ + +K G DHP++AT NN A LL
Sbjct: 158 MARVTVICATPEALKEAYLAIMELP--------------------EVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLRGFFELKGGQHAVYEWARELNVTTDMRSKDLFKNLSPEVSEEMIRLAGQNWAGTAYVLPDVQLDAGQYDLAEKSHRQELADAEHEAREFEDHDSEESRRAMHGENTARSRLAHVLEKQGKFEEAETIYRHSMSILKKTHGPDHPEIATGLNNWAGLL 377
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.200e-90 Identity = 158/240 (65.83%), Postives = 184/240 (76.67%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
+ARVTVIC TPEALKEAYLA+M LP Q VL +KNGF SDWMPSGYRDVKLNPVVN+H+CEIQLHLREFFALKGGQH VYEWAR+LNVTT+MR EDLF+ +S +V KEM+ LAG+NWR TG+ LPDLQLAAG+YDLAE+S R+ L DAEN+ R ED+DSKESR AL R N AR+RLA VL+KQGKY EA+ L +R++ + EKV G DHP +A NNRA L
Sbjct: 158 IARVTVICTTPEALKEAYLAIMELPT------------------QQVLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARSRLATVLDKQGKYEEAETLCVRSLAIDEKVYGPDHPKVAIGLNNRAGFL 379
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: A0A6H5K147_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K147_9PHAE) HSP 1 Score: 295 bits (754), Expect = 8.720e-83 Identity = 154/239 (64.44%), Postives = 175/239 (73.22%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAEL 717
MARVTV+CATPEALKE Y A+ GLP VLRVKNGFNSDWMPSGYRDVK+NPVVN+H+CEIQL LREFFALKGGQH VY+WARELNV ++R E L+KN+S EV KEMMRLAGQNWR TG+CLPDLQ+AAGQYDL E+ + L DAE ED+ SKESRRALLR+N ARARLA V +QGKY+EA+ LY +A E VLG +HP LA NN A L
Sbjct: 254 MARVTVVCATPEALKEVYSAITGLPK-----------------PHHVLRVKNGFNSDWMPSGYRDVKVNPVVNNHLCEIQLQLREFFALKGGQHAVYKWARELNVVADLRAEYLYKNLSIEVTKEMMRLAGQNWRGTGYCLPDLQVAAGQYDLVEKDLGQRLTDAERKTHGVEDHGSKESRRALLRLNTARARLAYVRLQQGKYSEAETLYKQAAASNELVLGPEHPRLAMDLNNLAGL 475
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: D7FH93_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH93_ECTSI) HSP 1 Score: 259 bits (661), Expect = 8.730e-74 Identity = 135/240 (56.25%), Postives = 156/240 (65.00%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
MARVT+ICA PEALKEAY ++M +P +Q VLR+KNGFNSDWMPSGYRDVKLNPVVN+H+CEIQLHLREFFALKGGQH VY+WAR+LNVTT MR EDL KN+SPEV KEM+ LAG+NWR T + LPDLQLAAGQYDLAE+SHR QGKY EA+ L+ R + + EKV G DHP++AT NN AE L
Sbjct: 157 MARVTLICANPEALKEAYSSIMEMP------------------EQHVLRIKNGFNSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHEVYKWARDLNVTTGMRSEDLIKNLSPEVSKEMLHLAGENWRGTAYVLPDLQLAAGQYDLAEKSHR-----------------------------------------QGKYKEAETLFRRLLAINEKVYGADHPEIATDLNNWAEFL 337
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.380e-72 Identity = 134/238 (56.30%), Postives = 159/238 (66.81%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAE 714
MARV+VIC TPE L+ Y +MG DV RV NGFN+DWMP GYRDVK+NPVVN+H+CEIQLHL +F LK QH VYEWAR+L VT++MR DLF +S EV +EM+RLA Q W TG+CLP+L LA+GQYD AEE R+ L +AEND + ED DS +SRRALL VN AR+ L VL +QGKY E L LR +E+ E LG DHPD A NNRAE
Sbjct: 158 MARVSVICLTPEDLQHVYSDIMG--------------------SLDVRRVTNGFNNDWMPGGYRDVKMNPVVNEHLCEIQLHLGDFSVLKSDQHAVYEWARDLKVTSKMRATDLFSTLSREVTEEMIRLARQGWFRTGYCLPELLLASGQYDQAEEGLRQQLSEAENDKQGVEDDDSNKSRRALLGVNTARSNLGAVLREQGKYVEVGRLCLRDVEMGEDTLGPDHPDFAIRLNNRAE 375
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: D8LLA4_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA4_ECTSI) HSP 1 Score: 246 bits (627), Expect = 5.830e-71 Identity = 126/182 (69.23%), Postives = 144/182 (79.12%), Query Frame = 1
Query: 175 MPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
MPSGYRDVKLNPVV +H+CEIQLHLREFFALKGGQH VYEWARELNVTTE+ GE L KN+SPEV KEMMRLAG+NWR TG+ L DLQL AGQYDLAE S RE LRDAE+ AR ED DSK+SRRAL+ NA RARLA +L ++ KY EA L +R++ EK+ G DHP +A NN A +L
Sbjct: 1 MPSGYRDVKLNPVVKEHLCEIQLHLREFFALKGGQHAVYEWARELNVTTEIDGEHLIKNLSPEVTKEMMRLAGENWRGTGYLLQDLQLDAGQYDLAETSFREKLRDAEHKAREFEDDDSKDSRRALVSANAVRARLAHILSEKAKYDEAKALCVRSLATYEKLYGPDHPAVAIGLNNWAGVL 182
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: D7FTB3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB3_ECTSI) HSP 1 Score: 254 bits (650), Expect = 4.650e-69 Identity = 137/240 (57.08%), Postives = 165/240 (68.75%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
MARVTVIC TPEAL++A+ A++G QDVLRV NGFNSDWMPSGYRDVK+N VV++H+CEIQL LREF ALK QH VYEWAR+LNVT+EM ED+F+N+SPEV++EMM LA ++W T CL LQLAAGQY AE+ ++ L +AE RV ED D KESR ALL NA RA L L +QGKY EA+ LY RA+EV +G+ HP A + NRA LL
Sbjct: 201 MARVTVICETPEALEQAFSAILGSLQ-----------------PQDVLRVANGFNSDWMPSGYRDVKVNAVVHEHLCEIQLQLREFVALKSDQHAVYEWARDLNVTSEMEPEDMFENISPEVVEEMMHLATEDWHGTRPCLEHLQLAAGQYAQAEKGLKQQLLEAEGAKRVFEDNDGKESRMALLDENANRAALCRALSEQGKYEEAEHLYTRAVEVLGVTVGQGHPIYARALGNRAGLL 423
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE) HSP 1 Score: 251 bits (642), Expect = 5.860e-67 Identity = 135/240 (56.25%), Postives = 168/240 (70.00%), Query Frame = 1
Query: 1 MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVKNGFNSDWMPSGYRDVKLNPVVNDHVCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDLAEESHRELLRDAENDARVAEDYDSKESRRALLRVNAARARLALVLEKQGKYTEADPLYLRAIEVAEKVLGRDHPDLATSFNNRAELL 720
MARV+VIC TPEALK AYLA++ + Q DVLRV NGFNSDWMPSGYRDVK+NPVVN+H+CEIQLHLREFF LK QH VYEWAR+L VTT +R E+LF +S ++ +EM+RLA +NW TG LP LQL AGQYD AE+ +R+ L +AE++ R ED + ESR A LR +A+A L VL +GKY EA+ LY + + EKVLG +HP LAT+ +N A+LL
Sbjct: 1584 MARVSVICDTPEALKRAYLAIVE------------------SFQGDVLRVANGFNSDWMPSGYRDVKVNPVVNEHICEIQLHLREFFTLKSDQHAVYEWARDLKVTTMLRAENLFDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGYRQKLSEAEDNRRGVEDNGNTESREASLR--SAKAGLGCVLGLKGKYAEAEALYAQCQAIEEKVLGPEHPSLATTLHNLADLL 1803 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig90.17172.1 >prot_E-siliculosus-1a_M_contig90.17172.1 ID=prot_E-siliculosus-1a_M_contig90.17172.1|Name=mRNA_E-siliculosus-1a_M_contig90.17172.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=586bp MARVTVICATPEALKEAYLAVMGLPNLGGVRLRSVSQRGPGNAQQDVLRVback to top mRNA from alignment at E-siliculosus-1a_M_contig90:645723..653794- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig90.17172.1 ID=mRNA_E-siliculosus-1a_M_contig90.17172.1|Name=mRNA_E-siliculosus-1a_M_contig90.17172.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8072bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:645723..653794- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig90:645723..653794- >mRNA_E-siliculosus-1a_M_contig90.17172.1 ID=mRNA_E-siliculosus-1a_M_contig90.17172.1|Name=mRNA_E-siliculosus-1a_M_contig90.17172.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3516bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:645723..653794- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |