mRNA_E-siliculosus-1a_M_contig90.17170.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: D8LKN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN1_ECTSI) HSP 1 Score: 972 bits (2513), Expect = 0.000e+0 Identity = 512/548 (93.43%), Postives = 515/548 (93.98%), Query Frame = 1
Query: 412 EGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVLLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAGGVHSDSRAPCLLCACMLLLPALVQISIDYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLRRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVLACLAAAWFVQGRAGQRGVYAARALTVASVRCLGLLLGVEQVVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSS-PPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARDPWQLDGLYPLPLVALTGVLGVWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAALVPTDGAEPPEMSYLFTVVPIVSLAMAAAAPFALFRRTPPTQAAVGTRLGSGGTVGSGIAEDWSGPMVPLE 2052
EGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLAC LLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAGG IS+DYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGL RRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDS+LASAVLACLAAAWF QGRAGQRGVYAARALTVASVRCLGLLLGVEQ VMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSS PPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARDPWQLDGLYPLPLVALTGVLG+WMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLA LVPTDG E PEMSYLFTVVPIVSLAMAAAAPFALFRRTPPTQAAVGTRLGSG VGSGIAEDWSGPMVPLE
Sbjct: 26 EGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACTLLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAGG-----------------------ISVDYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLGRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSLLASAVLACLAAAWFAQGRAGQRGVYAARALTVASVRCLGLLLGVEQAVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARDPWQLDGLYPLPLVALTGVLGIWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAVLVPTDG-ESPEMSYLFTVVPIVSLAMAAAAPFALFRRTPPTQAAVGTRLGSGEPVGSGIAEDWSGPMVPLE 549
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: A0A6H5KTV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV5_9PHAE) HSP 1 Score: 838 bits (2166), Expect = 1.310e-288 Identity = 485/565 (85.84%), Postives = 493/565 (87.26%), Query Frame = 1
Query: 2074 MASALYICSRPVISPLLRELLSGGSHVASASASSVDSPAHSLAFCGVVLALYALAVVSRHFPDSRVARRSGAALLVASMGLLVLQPSALSGVAEGDYGGVGRSWRSRREYVEQACGVAVAGVGVLTLTGLASPTKTLARRAAFAVAVGVPVGIWSALASMPGADAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRARRVGSVVVELYVAVVAFMPAAGIAQASWGAGWKEKKGLQLLILGPVGRNFMGLPPPTGHNDDXXXXXXXXTNAQGAARFALATAATGHAVIAVALKLLGERTGGAGXXXXXXXXXXXXXXXXXFGRRRGVQGPASVSRAFGEARWIPSMGNASAIFSAVGAFFCCWRHLPGESARALAAIPCCALLLLLQEDGRLFRGDTGFGAAVPAGALSATWAGSAAFYILLKGSSLAGAPRSSFSLMSLLVGGLLRPALGVYRGVLHHFHGAYGAADSRRHGEAAVALRAVSFWTADSPWQPLWNLVLLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADLA 3768
MASALYICSRPVISPLLRELLSGGSHV SASASSVDSPAHSLAFCGV+LALYALAVVSRHFPDSR+ ACGVAVAGVGVLTLTGLASPTKTLARRAAFAVAV VPVG+WSALASMPGADAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRARRVGSVV+ELYVAVVAFMPAAGIAQAS GAGWKE KGLQLLILGPVGRN MGL PPTGHN+D TNAQGAARFALATAATGHAVIAVALKLL ERTGGA XXXXXXXXXXXXXXXXXFGRRRGVQGPAS+SRAFGEARWIPSMGNASAIFSAVGAFFCCWRHLPGESARAL AIPCCALLLLLQEDGRLFRGDTGFGAAVPAGALSATWAGSA FYI+LKGSSLAGAPRSSFSLMSLL G PALGVYRGVLHHFHGAYG+ DSRRHGEAAVALRAVSFWTADSPWQPLWNL LLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADLA
Sbjct: 1 MASALYICSRPVISPLLRELLSGGSHVVSASASSVDSPAHSLAFCGVILALYALAVVSRHFPDSRM-----------------------------------------------ACGVAVAGVGVLTLTGLASPTKTLARRAAFAVAVAVPVGVWSALASMPGADAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRARRVGSVVIELYVAVVAFMPAAGIAQASQGAGWKEIKGLQLLILGPVGRNLMGLAPPTGHNNDGSGGG---TNAQGAARFALATAATGHAVIAVALKLLEERTGGA-XXXXXXXXXXXXXXXXXFGRRRGVQGPASISRAFGEARWIPSMGNASAIFSAVGAFFCCWRHLPGESARALTAIPCCALLLLLQEDGRLFRGDTGFGAAVPAGALSATWAGSAVFYIILKGSSLAGAPRSSFSLMSLLGAG---PALGVYRGVLHHFHGAYGSVDSRRHGEAAVALRAVSFWTADSPWQPLWNLALLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADLA 511
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: D8LKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN2_ECTSI) HSP 1 Score: 504 bits (1297), Expect = 2.780e-162 Identity = 316/359 (88.02%), Postives = 320/359 (89.14%), Query Frame = 1
Query: 2074 MASALYICSRPVISPLLRELLSGGSHVASASASSVDSPAHSLAFCGVVLALYALAVVSRHFPDSRVARRSGAALLVASMGLLVLQPSALSGVAEGDYGGVGRSWRSRREYVEQACGVAVAGVGVLTLTGLASPTKTLARRAAFAVAVGVPVGIWSALASMPGADAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRARRVGSVVVELYVAVVAFMPAAGIAQASWGAGWKEKKGLQLLILGPVGRNFMGLPPPTGHNDDXXXXXXXXTNAQGAARFALATAATGHAVIAVALKLLGERTGGAGXXXXXXXXXXXXXXXXXFGRRRGVQGPASVSRAFGE 3150
MASALYICSRPVISPLLRELLSGG HVASASAS VDSPAHSLAFCGVVLALYALAVVSRHFPDSRVARRSGAALLV SM LLVLQPSALSGV EG++GGVGRSW+SRREYVEQACGVAVAGVGVLTLTGL SPTKTLAR+AAFAVAVGVPVGIWSALASMPGA AAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRARRVGSVVVELYVAVVAFMPAAGIAQ GLQLLILGPVGRN MGL PPTGHND XXXXXXX AATGHAVI VALKLL ERTGG XXXXXXXXXXXXXXXXXFGRRRGVQGPASVSRAFGE
Sbjct: 1 MASALYICSRPVISPLLRELLSGGRHVASASASLVDSPAHSLAFCGVVLALYALAVVSRHFPDSRVARRSGAALLVTSMALLVLQPSALSGVVEGEHGGVGRSWKSRREYVEQACGVAVAGVGVLTLTGLTSPTKTLARKAAFAVAVGVPVGIWSALASMPGAAAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRARRVGSVVVELYVAVVAFMPAAGIAQ-----------GLQLLILGPVGRNLMGLAPPTGHNDGGXXXXXXXXXXXXXXXXXXXXAATGHAVITVALKLLEERTGGX-XXXXXXXXXXXXXXXXXFGRRRGVQGPASVSRAFGE 347
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: D8LKN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN3_ECTSI) HSP 1 Score: 437 bits (1124), Expect = 2.210e-139 Identity = 226/231 (97.84%), Postives = 227/231 (98.27%), Query Frame = 1
Query: 3169 MGNASAIFSAVGAFFCCWRHLPGESARALAAIPCCALLLLLQEDGRLFRGDTGFGAAVPAGALSATWAGSAAFYILLKGSSLAGAPRSSFSLMSLLVGGLLRPALGVYRGVLHHFHGAYGAADSRRHGEAAVALRAVSFWTADSPWQPLWNLVLLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADLASINLMGLTGLAGGLVQLWLLRERQATGRRII 3861
MGNASAIFSAVGAFFCCWRHLPGESARALAAIPCCALLLLLQEDGR+ RGDTGFGAAVPAGALSATWAGSAAFYILLKGSSLAGAPRSSFSLMSLL GGLLRPALGVYRGVLHHFHGAYGAADSRRHGEAAVALRAVSFWTADSPWQPLWNL LLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADL SINLMGLTGLAGGLVQLWLLRERQATGRRII
Sbjct: 1 MGNASAIFSAVGAFFCCWRHLPGESARALAAIPCCALLLLLQEDGRILRGDTGFGAAVPAGALSATWAGSAAFYILLKGSSLAGAPRSSFSLMSLLGGGLLRPALGVYRGVLHHFHGAYGAADSRRHGEAAVALRAVSFWTADSPWQPLWNLALLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADLTSINLMGLTGLAGGLVQLWLLRERQATGRRII 231
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: A0A6H5KUT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT8_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 6.900e-130 Identity = 218/248 (87.90%), Postives = 220/248 (88.71%), Query Frame = 1
Query: 868 VWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLRRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVLACLAAAWFVQGRAGQRGVYAARALTVASVRCLGLLLGVEQVVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFG 1611
+WAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWA PGLRRR+DKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVLACLAAAW CLGLLLGVEQ VMPLFDLSAFALSMLVFS RRDLKAYVVGVAGVSSF LWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAAL FGVLLVPGMVAFGVRQVAIGVVFG
Sbjct: 1 MWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWARPGLRRRMDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVLACLAAAW-----------------------CLGLLLGVEQAVMPLFDLSAFALSMLVFSDRRDLKAYVVGVAGVSSFTLWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALCFGVLLVPGMVAFGVRQVAIGVVFG 225
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: A0A6H5L8K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8K5_9PHAE) HSP 1 Score: 319 bits (818), Expect = 3.100e-97 Identity = 159/167 (95.21%), Postives = 161/167 (96.41%), Query Frame = 1
Query: 103 RQHPSDTVVASSSPQNPHQRIGSSRVPATTSATPRGVPAPGGGAPPPAIGDGSSSPKFLHNLRVWALGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAEGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVLLVGVWATLQFGTIYRDGPDAARLLER 603
+QHPSD VASSSPQ+PHQRIGSSRVP TTSATPRGVPAPGGGAPP AIGDGSSSPKFLHNLRVWA GGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNA GALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVLLVGVWATLQFGTIYRDGPDAARLLER
Sbjct: 2 KQHPSDPAVASSSPQSPHQRIGSSRVPETTSATPRGVPAPGGGAPPRAIGDGSSSPKFLHNLRVWAFGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAGGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVLLVGVWATLQFGTIYRDGPDAARLLER 168
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: B8BKU7_ORYSI (Uncharacterized protein n=13 Tax=Oryzeae TaxID=147380 RepID=B8BKU7_ORYSI) HSP 1 Score: 137 bits (344), Expect = 1.140e-28 Identity = 146/550 (26.55%), Postives = 233/550 (42.36%), Query Frame = 1
Query: 259 SSSPKFLHNLRVWALGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAEGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVL----------LVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAGGVHSDSRA------PCLLCACMLLLPALVQISIDYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLRRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVL--ACLAAAWFVQGRAGQRGVYAARALTVASVRCLG---LLLGVEQVVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARD--PWQLDGLYPLPLVALTGVLGVWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAA 1839
+S P F HN RV A P LL LGG P +A G+ A Y D +GA +VW A++ +A + ++L A+V VL L+GVWA+LQF I + P LERLLFAC P+ A AI TWA V+ G A+ +A F L+++P S D+ C+ +L +P L + + L W ++ + L +P+ L ++G LWW T R +D+I G V+L+V+ + V+ F ++ + PPL+ +L + + L A G+ G ++ A T +V G +++G + +PL +S + + F ++ L +Y VA S +LWF W L+ W G PL S + A G+ L+P + F V G HA+++ +E L ++ D +YP +V T LG+ + RL D V P W+ + ++K+ F+ +
Sbjct: 80 ASQPAFAHNARVAAALAPAAAFLLDLGGLPVFAVLAVGLAAAYLLDALRQRQGAFFTVWAALI-AADVAFFFSASLSSAASASVPLTVLALLLCAETSFLIGVWASLQFRWIQLENPTIVAALERLLFACVPIAAPAIFTWAVVSAVGMANASYYLATFSMVFYWLFSIPRPSSFKNRKQDAPWQDTDGILGPLESCVHALYLLFVPVLFHAASHHATLF-----ASWANVCDLLLLFFIPFLFQLYASTRGALWWITRD-ARTMDQIRMANGLVALVVVVLCLEVRVVFHSFERYIHA--PPPLNYLLVTVTMLGGALGMAAHAAGKVGD--AVSSVAFTGLAVLVSGAGAIVIGFPIMFLPLPMISGYYAAR--FFTKKSLSSYFTFVAIASMMVLWFVVHNYWDLNI----------WIAGM----PLKSFTKYVVAAVIMAMTVPGLALLPTKLRFLVELGLTG-----HALLICYIENRLFNYATMYYFGFEDDVMYPSYMVLFTTFLGLALVRRLSVDQRVGPKAAWILTCLYSSKLSMLFITS 597
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: A0A811QDE1_9POAL (Hypothetical protein n=2 Tax=Andropogoneae TaxID=147429 RepID=A0A811QDE1_9POAL) HSP 1 Score: 134 bits (338), Expect = 3.960e-28 Identity = 151/560 (26.96%), Postives = 236/560 (42.14%), Query Frame = 1
Query: 226 GGAPP--PAIGDGSSSPKFLHNLRVWALGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAEGALVSVWGAVL-------WSAGTLLWAGSTLGLVHKANVLACV--LLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAGGVHSDSRA------PCLLCACMLLLPALVQISIDYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLRRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVL--ACLAAAWFVQGRAGQRGVYAA-RALTVASVRCLGLLLGVEQVVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARDPWQL--DGLYPLPLVALTGVLGVWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAA 1839
GGA P A +S P F HN R+ P LL LGG P +A G+ A Y D +GA +VW A+L +SA A ++L L A +L L+GVWA+LQF I + P LERLLFAC P+ A A+ TWA V+ G A+ A F L+++P S DS C+ +L +P L + L + W S+ ++ L +P+ L ++G LWW T R +D+I V G V+L+V+ + V+ F ++ + PPL+ +L + + L A G+ G A L V +++G + +PL +S + ++ F ++ L +Y VA S +LWF W L+ W G PL S + A G+ L+P + F + IG H ++L +E L + + D +YP +V +T LG+ + RL D + P W+ + ++K+ F+ +
Sbjct: 69 GGAGPRGSAAATSASGPAFAHNARLAVALVPAAAFLLDLGGLPVFAVLAIGLAAAYLLDALQLRQGAFFTVWAALLAADVAFFFSASLSSAAAASLPLTALALLLCAETSFLIGVWASLQFRWIQLENPTIVAALERLLFACVPIAAPALFTWALVSAVGMANASYYFAAFCMVFYWLFSIPRPSSFNSRKQDTPILDSDGILGPLESCVHSLYVLFVPVLFHAVSHHATLFTS-----WASVCELLLLFFIPFLFQLYASTRGALWWITRD-ARAMDQIRIVNGFVALVVVVLCLEVRVVFHTFGRYIHA--PPPLNYLLVTVTMLGGALGLAAHAAGKVGDAASSVAFTGLAVLVSGAGAVVIGFPMMFLPLPMISGYYVAR--FFTKKSLSSYFTFVALASLMVLWFVVHNYWDLNI----------WLAGM----PLKSFTKYVVAAVIMAMAVPGLALLPTKLRFLLELGLIG-----HTLLLCYIENRLFNYASMYYYGFEDDIIYPNYMVFITTFLGLALVRRLYVDQRLGPKAAWILTCLYSSKLAMLFMTS 599
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: A0A453JK02_AEGTS (Uncharacterized protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453JK02_AEGTS) HSP 1 Score: 134 bits (337), Expect = 6.740e-28 Identity = 147/551 (26.68%), Postives = 232/551 (42.11%), Query Frame = 1
Query: 274 FLHNLRVWALGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAEGALVSVWGAVL-------WSAGTLLWAGSTLGLVHKANVLACV--LLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAGGVHSDSRA------PCLLCACMLLLPALVQISIDYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLRRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVL--ACLAAAWFVQGRAGQRGVYAARALTVASVRCLGL----------LLGVEQVVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARD--PWQLDGLYPLPLVALTGVLGVWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAA 1839
F HN R+ P LL LGG P +A G+ A Y D +GA +VW A+L +SA A ++L L A +L L+GVWA+LQF I + P LERLLFAC P+ A+A+ TWA V+ G A+ +A F L++VP S DS C+ +L +P L + ++ L W ++ + L +P+ LL ++G LWW T R +D+I G V+L+++ + V+ F ++ + PPL+ +L + + L A G+ G V+SV +GL ++G V +PL +S + ++ F ++ L +Y V S +LWF W L+ W G PL S + A G+ L+P + F V IG HA++L +E L A ++ D +YP +V +T G+ + RL D V W+ + ++K+ F+ +
Sbjct: 129 FAHNARIAVALAPAAAFLLDLGGAPVLAVLAVGLAAAYALDALRLRQGAFFTVWAALLAADVAFFFSASLSSAAAASLPLTVLALLLCAETSFLIGVWASLQFRWIQLENPTIVAALERLLFACVPIAASAVFTWAVVSAVGMANASYYLATFAMVFYWLFSVPRSSSFKNRKQDAPLQDSDGILGPLESCVHALYLLFVPVLFHAASNHTTLF-----ASWANVCDLLLLFFVPFLFLLYASTRGSLWWITRD-TRTMDQIRMANGLVALVIVVLCLEVRVVFHAFGRYIHA--PPPLNYLLVTVTMLGGALGLAAHAAGKVGD---------AVSSVAFMGLAVLVSGAGAVVIGFPLVFLPLPMMSGYYVAR--FFTKKSLSSYFTFVGISSLMVLWFVVHNYWDLNI----------WVAGM----PLKSFTKYIVAAVIMAMAVPGLALLPAKLRFLVELGLIG-----HALLLCYIENRLFNYAAMYYFGFEDDIIYPSYMVLITTFFGLALVRRLSVDQRVGSKAAWILTCLYSSKLSMLFITS 641
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Match: A0A5J5AID0_9ASTE (Uncharacterized protein n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5AID0_9ASTE) HSP 1 Score: 130 bits (327), Expect = 1.130e-26 Identity = 150/548 (27.37%), Postives = 242/548 (44.16%), Query Frame = 1
Query: 274 FLHNLRVWALGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAEGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVL--------LVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGG---ATY---AAPCVALFMYAAVGLYAVPLRSGLGGGGAGGVHSDSRAPCLLCAC-----MLLLPALVQISIDYRLLVWAGGAVRWKSLQKVA---LAASLPWPMLLSLRSKGVLWWATPGLRRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVL--ACLAAAWFVQGRAGQRGVYAARALTVASVRCLGLLLGVEQVVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARDPWQL--DGLYPLPLVALTGVLGVWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAA 1839
FLHN R+ PC LL LGG P + G+M Y FD + G+ +VW ++L+S ++ S H + + L+GVWA+LQF I + P LERLLFAC PL A+ + TWA V+ G A+Y A CV ++++ + + L+ + G G V D+ L +C +L P L I+ Y AV + S V L +P+ L ++G LWW T +L I V GAV+L+++ + V+ F ++ P P ++ +A+L A A A+ + A A AL V +++G + +PL ++ F L+ F ++ L +Y V VA S ++WF Q W L+ W G + L S L S A G+ L+P + F +G++ HA++L +E + + L D +YP +V LT +G+ + RL DH + P +W+ + ++K+ F+ +
Sbjct: 70 FLHNPRIAIALVPCAAFLLDLGGTPVIATLTVGLMISYIFDAVNFKSGSFFAVWLSLLFSQIAFFFSSSLFVTFHSIPLALLAIFVCGQANFLIGVWASLQFKWIQIEYPTIVLALERLLFACVPLTASVLFTWATVSAVGMNNASYYLMAFNCVFYWIFSVPRVSSFKLKQEVSYHG-GEVPVDNLILGQLESCVHTLNLLHFPLLFHIASHY--------AVTFSSAASVCDLLLLFFIPFLFQLYASTRGALWWVTKN-EHQLRGIRVVNGAVALVIVVICLEVRVVFNSFGRYI-QVPSPLNYLLVTTAMLGGAAAAGAYALGMIADAFSSVAFTALAVIVSAAGAIVVGFPMLFLPLPSVAGFYLAR--FLTKKSLPSYFVFVALGSLMVIWFVLQNYWDLNI----------WLAGMS----LKSFCKLIVASVVLAMAVPGLALLPSKLHF---LTEVGLIS--HALLLCYIEDRFFNYSSIYYYGLEDDVMYPSYMVVLTTFVGLALVRRLSVDHRIGPKAVWILTCLYSSKLAMMFITS 585 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig90.17170.1 >prot_E-siliculosus-1a_M_contig90.17170.1 ID=prot_E-siliculosus-1a_M_contig90.17170.1|Name=mRNA_E-siliculosus-1a_M_contig90.17170.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1288bp MASLPVRRRVNAGPPTGAAPRTNEHEIRRGTRSRRQHPSDTVVASSSPQNback to top mRNA from alignment at E-siliculosus-1a_M_contig90:600997..618576+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig90.17170.1 ID=mRNA_E-siliculosus-1a_M_contig90.17170.1|Name=mRNA_E-siliculosus-1a_M_contig90.17170.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=17580bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:600997..618576+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig90:600997..618576+ >mRNA_E-siliculosus-1a_M_contig90.17170.1 ID=mRNA_E-siliculosus-1a_M_contig90.17170.1|Name=mRNA_E-siliculosus-1a_M_contig90.17170.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=7728bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:600997..618576+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |