mRNA_E-siliculosus-1a_M_contig90.17135.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A6H5LH86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH86_9PHAE) HSP 1 Score: 568 bits (1463), Expect = 3.100e-198 Identity = 294/360 (81.67%), Postives = 298/360 (82.78%), Query Frame = 1
Query: 1 MLDERDHEIGGSHGXXXXXXXXXCGGADEGMGATVLSLAQGLGLEFVPLSALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSFEIYDLEAAPNNGNANANDAGGGDV--GAAEPVEMEDVVVDQPPAQAPLQAAD 1074
MLDERDHEIGGSHG XX GAD+GMGATVLSLAQGLGLEFVPLSALLFLDARDI ACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWT+QDPWYRNEK APKVDFK DHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSFEIYDLEAAP+NGN GAAEPVE+EDV VDQPPAQAPLQAAD
Sbjct: 1 MLDERDHEIGGSHGGGXX-------GADQGMGATVLSLAQGLGLEFVPLSALLFLDARDIEACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTSQDPWYRNEK-------------------------------------APKVDFKPDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSFEIYDLEAAPDNGNXXXXXXXXXXXXGGAAEPVEVEDVAVDQPPAQAPLQAAD 316
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: D8LKJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ8_ECTSI) HSP 1 Score: 473 bits (1216), Expect = 7.370e-162 Identity = 248/324 (76.54%), Postives = 255/324 (78.70%), Query Frame = 1
Query: 1 MLDERDHEIGGSHGXXXXXXXXXCGGADEGMGATVLSLAQGLGLEFVPLSALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQG--LYHHGGAK--------PLESSGTCCRGVLAAQ-----------APKVDFKLDHTVLRHGDMS-----LPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEE 894
MLDERDHEIGGSHG GGAD+GMGATVLSLAQGLGLEFVPLSALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWL AEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAG+G L G P G G L A+ AP+ D V ++ D ANI+WRFV RTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEE
Sbjct: 1 MLDERDHEIGGSHG----------GGADQGMGATVLSLAQGLGLEFVPLSALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLHAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGRGPTLPPRWGKTTGERWRVLPWRPCGAGAEGGLQARPHGSASRRHVAAPREDESAFQGVEKNEDDDGGGGCFAAKANISWRFVGRTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEE 314
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A7S0MIA4_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MIA4_9CRYP) HSP 1 Score: 145 bits (367), Expect = 1.930e-36 Identity = 93/267 (34.83%), Postives = 136/267 (50.94%), Query Frame = 1
Query: 133 EFVPLSALLFL-DARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAM----RAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQ-WEEAMSFNTG 915
E + LS+ + L D R + C +F + + +WR LW KVF+P+ + + R++E +I SL DSKRT + +EEL+S ++FRFK+ AG WT QDP+++ ++ PL R + V F D WRFV+ +G+ GSF+RVS+ R VPTY+VSRH SNWGF+L++CW VY S+ MPP + SL D L MDD+ W EA+++N+G
Sbjct: 20 EEILLSSFIQLKDHRCVVRCSRVCKFWNAVSRQNSLWRDLCISLWSDKVFIPDQFKPLNTSGRSREAFINSLMDSKRTAITSEELSSILFYFRFKEVAGSYWTDQDPFWQKQE---------------------PL-------RITFTPEGRLVGFPWD-------------VLEAKWRFVDNSGKTCQTRGSFIRVSVNDRSVPTYMVSRH-SNWGFILQNCWVVYFSFPMPPIGA---ELSLDDRALDELMDDERWGEALAYNSG 241
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A7S0MYI2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MYI2_9CRYP) HSP 1 Score: 145 bits (366), Expect = 3.060e-36 Identity = 91/267 (34.08%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 133 EFVPLSALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMR----AKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDP-WYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQ-WEEAMSFNTG 915
E + + + R + C + + A + +W+ RLW K VP S R++R +KE +I SLRDSKRT + AEEL+S+ ++FRFK+ AG WT +DP W +NE P+ S + P F A + W FV+ G+ G TGS +RV++ GR VPTY +SRH SNWG +L++ W VY S+ MP E D SL D L +DD+ W EA+ +N G
Sbjct: 26 EIISIIFIQLCSHRCVLICSEVCKLWNMTANQDSIWKDLCIRLWADKAAVPSSFRSLRDSCRSKEAFIGSLRDSKRTSITAEELSSYQFYFRFKRVAGSYWTEKDPYWSKNE----------------------PMRIS-------FSTDGPVTGFPWG-------------ALRMTWHFVDGDGKACGQTGSAMRVAVNGRCVPTYTISRH-SNWGIILQNTWVVYLSFPMPRIED---DDSLTDSALDALLDDERWAEALEYNRG 246
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A0M0J8D1_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8D1_9EUKA) HSP 1 Score: 146 bits (368), Expect = 1.100e-35 Identity = 106/304 (34.87%), Postives = 150/304 (49.34%), Query Frame = 1
Query: 85 EGMGATVLSLAQGLGLEFVPLSALL--FLDARDIGACGAANRFLHKA-AGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLR----DSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSFEIYDLEAAPNNGNANAN 975
+G GA++LS + E L AL+ LD +G +R L + W LW+ KV+VP +R +RA A+LR D++RTWL +EL + W FRFK AGE+WT +DP++ + + + G G A ES GT P L+H LR W++ + G G S L + + GR+VPTY VSRH SNWGFL++SCW +YTS+ MP R D SL D+ L +T++ Q EA ++NTGL YD A + G +A+
Sbjct: 2 DGEGASILSRVE----EHPDLVALIASHLDLAGVGRLAGVDRTLRTIISSTNDAWEGHCSHLWDRKVYVPLRARKLRASGDARAALRLSIEDAERTWLTDDELCALEWNFRFKASAGESWTEEDPYWNDLPPTRVKFEMPSATGGEVGGEADGAESRGT--------MKPSGFEMLEHRSLR-------------WQWAKGRGEDVGGDRSRLELYVDGRKVPTYHVSRH-SNWGFLMQSCWVLYTSFPMPVRG---TDPSLDDEALEITIERQSREARAYNTGL---FYDPTAEVDGGAGSAD 273
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A5J4YMR8_PORPP (F-box domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMR8_PORPP) HSP 1 Score: 132 bits (332), Expect = 6.030e-31 Identity = 79/243 (32.51%), Postives = 116/243 (47.74%), Query Frame = 1
Query: 211 HKAAGDEGVWRAARDRLWEGKVFVPESSRAMRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSFEIYDL 939
H A+ +W+ +LW KV++ ++ R + Y SL DSKR +L+ +EL F W FRFK AGE W DPW++ + +A +V F D V+ G + + WRFVE + GSF+RV+ E P YIVSRH NWGF+L+SCW ++TS+ MP R D L D+ LTVT++ Q +EA +N ++ ++
Sbjct: 71 HAASRSNLLWKELCAKLWSDKVYIKDAIRGRPPMDAYRESLADSKREYLELDELVGFEWSFRFKAAAGEHWVETDPWWQED------------------------------------GEAVRVKFGRDGRVMGRGQVHV--TQQFRWRFVESSCGMVRRKGSFIRVN----EFPCYIVSRH-PNWGFILQSCWVLHTSFPMPHRG---TDAFLEDENLTVTVEQQKDEANEYNARVTRYFFNF 267
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A7S4DSF9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DSF9_9EUKA) HSP 1 Score: 132 bits (333), Expect = 1.340e-30 Identity = 80/258 (31.01%), Postives = 119/258 (46.12%), Query Frame = 1
Query: 151 ALLFLDARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAM---RAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTG 915
++ FLD D+ +CG NR + A+ + +W + LW KV+VP+ R M ++ Y+ SLRD++R + +EL FSW FRFK+ AG W DP++ L+ G+ + + K D L+ S A W E T G R+ + P+Y++SRH NWGFL++SCW ++TS+ MP P D+ L D L V +DDQ EE +N G
Sbjct: 19 SMSFLDVEDVLSCGMVNRRWYSASQENQIWGVLCEALWRDKVYVPKQIRGMANGNPRQAYVESLRDARRQYPTLDELLEFSWCFRFKKSAGPHWIQIDPYWT-------------------------LDHKGSSIASTIIRKF-KADGSLERLDTHEAMRSFAGEAKFKWAVRETT---DGDKRFVKRIQVN--HFPSYVISRHSRNWGFLMQSCWVLWTSFPMP---APGIDKFLDDGHLEVRVDDQIEEVHRYNFG 242
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A812PGR1_9DINO (Kif11-b protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PGR1_9DINO) HSP 1 Score: 135 bits (340), Expect = 3.370e-30 Identity = 92/283 (32.51%), Postives = 130/283 (45.94%), Query Frame = 1
Query: 136 FVPLSALLFLD---ARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMR--AKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLD-HTVLRHGDM--SLPPAANINWRFVE-----------RTGRRTGPTGSF----LRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPREGPDCDQSLLDDKLTVTMDDQWEEAMSFNTG 915
FV S +L L A++I A A L A VW LW+G+ + + R A+E Y SL DS+RT + EL S W FRFK AGE W A DPW++ + +A +V FK + + G + S PP + WRFV TGR + F +R + GREVPTY V R++ NWG+ +ESCW V++SW MP ++ P+ + L D++L V+ D Q ++AM+FN G
Sbjct: 8 FVDESLILLLGNLRAQEIAAVAATGSRLRSVAVSNPVWDGLCGALWQGRAVLHRFTELRRSDAREAYRQSLEDSRRTNITRGELLSIDWSFRFKASAGEGWQAGDPWWQGQ-------------------------------------EATRVRFKKNGRAAFKRGPLFGSRPPV--LRWRFVRFPARTHQALNRTTGRGSADFSEFGRRGIRAKVMGREVPTYCVRRNKHNWGWTMESCWVVWSSWPMPRKDSPEA-ELLEDERLPVSFDVQEDQAMAFNNG 250
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A139A730_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A730_GONPJ) HSP 1 Score: 134 bits (337), Expect = 1.630e-29 Identity = 92/261 (35.25%), Postives = 127/261 (48.66%), Query Frame = 1
Query: 166 DARDIGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRAMR---AKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVD-FKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPPR----EGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSF 924
DA + C +R A ++ +W A D LWEGKV+VPE R +R + Y+ SL DS+R + EEL S W FRFK AGE +T +DPW+ + P+V F DHT+ +++P WRFV+ +G GP G+F+RV GR P ++SRHR NWG+ ++SCW V TS+ +PPR E P D L D+ L VT Q E + +N GLS+
Sbjct: 149 DAVSLLRCSWVSRAWRAFATEKVLWAALCDMLWEGKVYVPEKFRELRDSDPRRAYVESLIDSRRFIITKEELLSVPWHFRFKSSAGEHFTDEDPWWNH--------------------------------------LPPRVRRFLPDHTI---EGLAVP---GWKWRFVDTSGGVRGPRGAFVRV---GR-TPASVLSRHR-NWGWYMQSCWHVQTSFPLPPRNVEGEDPTEDPELTDEALKVTTGVQKYEVLCYNAGLSY 360
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Match: A0A7S0P386_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P386_9EUKA) HSP 1 Score: 125 bits (313), Expect = 5.130e-28 Identity = 88/270 (32.59%), Postives = 121/270 (44.81%), Query Frame = 1
Query: 154 LLFLDARD-IGACGAANRFLHKAAGDEGVWRAARDRLWEGKVFVPESSRA---MRAKEGYIASLRDSKRTWLDAEELTSFSWWFRFKQQAGEAWTAQDPWYRNEKGCTSEPASSAGQGLYHHGGAKPLESSGTCCRGVLAAQAPKVDFKLDHTVLRHGDMSLPPAANINWRFVERTGRRTGPTGSFLRVSIGGREVPTYIVSRHRSNWGFLLESCWTVYTSWEMPP---REGPDCDQSLLDDKLTVTMDDQWEEAMSFNTGLSFEIYDLE 942
L FL+A D + + A +RF AA + VW RLW KV+VPE RA MR E + S D+ RT L A EL + SW R K AG WT DPW++ + + + GT + + P WRFV + RTGP GSF+R+S G R PT++VSR NWG++L++CW S+ +PP G + D L +V ++ EEA FN GL D++
Sbjct: 47 LSFLEASDLVDSAVAVSRFWRTAALSDAVWSELCARLWLDKVYVPEQFRAPMGMRRVEAFYRSTADATRTHLTAHELCTLSWHSRMKGWAGSMWTHDDPWWKGQPAAV-----------------RTFAADGT----TTSERGPG-----------------------RWRFVPDSCGRTGPLGSFVRLSRGPRSYPTHVVSRWPPNWGWILQNCWGFAASFPLPPLGSEPGLEDDGELCQ---SVNVETCEEEAQRFNMGLPLPHDDVQ 269 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig90.17135.1 >prot_E-siliculosus-1a_M_contig90.17135.1 ID=prot_E-siliculosus-1a_M_contig90.17135.1|Name=mRNA_E-siliculosus-1a_M_contig90.17135.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=437bp MLDERDHEIGGSHGGGGGGGGGGCGGADEGMGATVLSLAQGLGLEFVPLSback to top mRNA from alignment at E-siliculosus-1a_M_contig90:260534..267632+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig90.17135.1 ID=mRNA_E-siliculosus-1a_M_contig90.17135.1|Name=mRNA_E-siliculosus-1a_M_contig90.17135.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7099bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:260534..267632+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig90:260534..267632+ >mRNA_E-siliculosus-1a_M_contig90.17135.1 ID=mRNA_E-siliculosus-1a_M_contig90.17135.1|Name=mRNA_E-siliculosus-1a_M_contig90.17135.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2622bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:260534..267632+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |