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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 300 |
| Model size | 459 |
| Exons | 3 |
| Hectar predicted targeting category | mitochondrion |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936419.8445508-UTR-E-siliculosus-1a_M_contig90:10036..10195 | 1622936419.8445508-UTR-E-siliculosus-1a_M_contig90:10036..10195 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig90 10037..10195 + |
| 1696251070.1114147-UTR-E-siliculosus-1a_M_contig90:10036..10195 | 1696251070.1114147-UTR-E-siliculosus-1a_M_contig90:10036..10195 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig90 10037..10195 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig90.17105.1 >prot_E-siliculosus-1a_M_contig90.17105.1 ID=prot_E-siliculosus-1a_M_contig90.17105.1|Name=mRNA_E-siliculosus-1a_M_contig90.17105.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=100bp
MFRFGKTKYLAFKTAGNPLLVRKSATAETSTRYFGGPPGDEDKALDETAG
GIMEDGRQSMGADDIRKHLRQVRPSGCWLKVRRVEHVLALSYNTIEALG* back to topmRNA from alignment at E-siliculosus-1a_M_contig90:8707..10195+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig90.17105.1 ID=mRNA_E-siliculosus-1a_M_contig90.17105.1|Name=mRNA_E-siliculosus-1a_M_contig90.17105.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1489bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:8707..10195+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTCCGGTTCGGAAAAACCAAATATCTAGCATTTAAAACAGCTGGAAA
CCCTCTTTTGGTTCGAAAATCAGCCACGGCAGAGACCAGCACCCGCTACT
TTGGTGGGCCACCGGGAGACGAGGACAAGGCGCTGGATGAAACAGCAGGT
ACACCCCGTTGCATACACTCACAACACTGCTGGCTGCCGACTGTGATAAA
TCAGATGCAACCAGTTCGTAAGAAATCGTTGCTGGTGGCAAGATTGGTTC
TTGTGCATGTGTATCTTTGCGGACCAGAGCAGCAGCACAGGACGGCGCTC
TTGCCCTAGCTTAGCTTACAGAGCGAGGAACCTGGTCGGATGTATATCTA
CGAGCAGCCCTGGATGTGGAGGGTCGTCTGGTAGCGTCAGATTCTCGAAT
ACGTGTTGCCGTGTATACGTTCTGCTGCGGTGGAAAGGGGGCTCCGTGAT
GGCCCCAAACTGGACCGTAAGCTGTAGAAACGCACACATGGGTGCCGGCA
CAAGCGGTAGAGGTTAGTCAAACTTATCGCATATAGTCGTACTTGACATG
CTCAGTACTTTCGCCGAGTTTGGAACTGAAAGAGGCCCGGACGCAAAAGT
TATGGGTGGCGACATAAATCCTGTACAGCAGTCCGCGGAAAGTGTACCTA
TATAGGCGTTTTGACCTCCATCAACCATTCTGATCTGTGTCAAAGATGGC
TCAAACGATGCCCAGGAGAAATACCTTTCATACGATATACAACGGACCAG
GTTCCTCTTTAAATTGGTCGAGTTACGGCGTTTTCCGTACTACTGTGGTG
AACCCCTTATTAATAGGGATTTAGTATAGAAAAAATACAGCTTGTCGCGG
TTTGCTGGTGTCCTCTCTGTGCACGTATGAACGGGTGTCGAGGTTGTTGT
ACGGTGCCTTACGCGGTACTTCGCTGCTCCTCGACGACGGAGACCAACCA
AATAACTAATGCCACACGATCTTTTGAGAATGTCAAGCGTGTTCTCGGCA
TTACGATATATAATTTGTGTTGAATACATGTACAAAACCTGGATACAACC
GTCAGTTGGAGTGTGCGCGAACGCCCTTGCCGGATGACTTGTAGCGGAAA
TTTGGGCCCCACATGCCCCTCAGTGTTATGCTTATGCTTCGTAAATGGTC
GCTGGTCTGCTGCAGGTGGTATCATGGAGGATGGGCGCCAATCGATGGGC
GCTGACGACATTAGAAAACACCTTCGACAGGTCCGACCCAGCGGGTGTTG
GCTCAAAGTGCGTCGCGTAGAGCATGTGCTGGCGCTGAGTTATAATACCA
TCGAAGCCTTAGGTTAGTCTATAAAACAGATTGCCTCCCAGGCCAAAGAT
GCCGAAGGTGACGGCGAATCAAATGGCGGAGGAGGACCGCCGCCTACAGG
ACATCCGACAGGAAACCCGAGGAAGAGGAAGGGGGCGGGTGGCACAGCGA
CTCCAGAGTACAACTCTGGAGGGAGCAACACGAAAACAA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig90:8707..10195+ >mRNA_E-siliculosus-1a_M_contig90.17105.1 ID=mRNA_E-siliculosus-1a_M_contig90.17105.1|Name=mRNA_E-siliculosus-1a_M_contig90.17105.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=600bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig90:8707..10195+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTCCGGTTCGGAAAAACCAAATATCTAGCATTTAAAACAGCTGGAAA
CCCTCTTTTGGTTCGAAAATCAGCCACGGCAGAGACCAGCACCCGCTACT
TTGGTGGGCCACCGGGAGACGAGGACAAGGCGCTGGATGAAACAGCAGAT
GTTCCGGTTCGGAAAAACCAAATATCTAGCATTTAAAACAGCTGGAAACC
CTCTTTTGGTTCGAAAATCAGCCACGGCAGAGACCAGCACCCGCTACTTT
GGTGGGCCACCGGGAGACGAGGACAAGGCGCTGGATGAAACAGCAGGTGG
TATCATGGAGGATGGGCGCCAATCGATGGGCGCTGACGACATTAGAAAAC
ACCTTCGACAGGTCCGACCCAGCGGGTGTTGGCTCAAAGTGCGTCGCGTA
GAGCATGTGCTGGCGCTGAGTTATAATACCATCGAAGCCTTAGGTTAGTG
GTATCATGGAGGATGGGCGCCAATCGATGGGCGCTGACGACATTAGAAAA
CACCTTCGACAGGTCCGACCCAGCGGGTGTTGGCTCAAAGTGCGTCGCGT
AGAGCATGTGCTGGCGCTGAGTTATAATACCATCGAAGCCTTAGGTTAAA back to top
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