mRNA_E-siliculosus-1a_M_contig9.17101.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17101.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.17101.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 825 bits (2132), Expect = 8.910e-301
Identity = 420/455 (92.31%), Postives = 428/455 (94.07%), Query Frame = 1 
Query:    1 GRPQDSSGEVAHDVAEKKRGETTAVVWNCCSSWLCCRTPLFNSLHRFRDHAWCRGCRPAAADGSGEGEFEWRQEIARGRSKRGRIARAGTSPDYGRCQVEIRLLNGNTAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTFDVALSSRTRGANSFGVQIYRPTGTRFFATRFARCEN 1365
            GRPQDSSGE  HDVAEK+RGETTAVVW+CCSSWLCCRTPL NSLHRFRDHAWCRGCRPAAADGSGEGEFEW QEIARGRSKRGRIARA   P+ G         NGNTAMLKLLISKGA+LETEARFPAGSRAIHAAISGENPTALCVLLEAGAD NSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTP  LNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGE+NRRKWAECRLRDGTPLHLAAAWVSVR +HVLL+AGARETLPNRYGKLA +EVGIAL PPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGT DVALSSRTRGA SFGVQIYRPTGTRFFATRFAR  N
Sbjct:   10 GRPQDSSGEAGHDVAEKERGETTAVVWHCCSSWLCCRTPLLNSLHRFRDHAWCRGCRPAAADGSGEGEFEWSQEIARGRSKRGRIARAAIPPNCG---------NGNTAMLKLLISKGANLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKSFGVQIYRPTGTRFFATRFARYAN 455
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 654 bits (1687), Expect = 6.680e-234
Identity = 338/351 (96.30%), Postives = 341/351 (97.15%), Query Frame = 1 
Query:  313 NGNTAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTFDVALSSRTRGANSFGVQIYRPTGTRFFATRFARCEN 1365
            NGN AMLKLLISKGADLETEARFPAGSRAIHAAISGENPTAL VLLEAGAD NSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTP ALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAI WACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLL+AGARETLPN YGKLAS+EVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGT DV LSSRTRGANSFGVQI+RPTGTRFFATRFAR  N
Sbjct:   50 NGNAAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANSFGVQIFRPTGTRFFATRFARYAN 400
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.090e-51
Identity = 141/368 (38.32%), Postives = 196/368 (53.26%), Query Frame = 1 
Query:  316 GNTAMLKLLISKGADLETEAR-------------FPAGSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTAL----ADTGALLARELFKVGASPFVKNADGM-SAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNA--AIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTP-LHLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTFDVALSSRTRGANSFGVQIYRPTGTRFFATRFAR 1356
            G   +LKLLI  GADL+  +              F  G+  +H A++GEN  AL +LL AGAD N  DG G TPLM+T L    A    L A                   +A+HVAA     +++ ++L+  P  +N+ + KG T +  AA  G   AV  LLSAGA D      N   ++  A + GH ++VR++L+ G+  VGG  A+  ++  ++  R  +IL+ML+  EGE+ R KWA  R  DGTP LHLAAA  S+ A  +LL AGA E   N   K AS  VG AL P  +++P   AAV R+L+RGPA+RARS+ W             + S   G  +  V+I+RPTG +FF+ RF+R
Sbjct:   50 GRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAAL-PANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSMKGGRATLDVRIFRPTGNQFFSARFSR 416
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 4.020e-47
Identity = 135/341 (39.59%), Postives = 188/341 (55.13%), Query Frame = 1 
Query:  316 GNTAMLKLLISKGADLETEA----RFPAGSRAIHAAISGENPTALCVLLE---AGADLNSRDGAGETPLMLTALADTGAL----LARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLA-LNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFW--ACDGGHPRMVRMML-EHGINRVGGLGAI-PNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPL-HLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTFDVALSSRTRG 1287
            G+ +M+K L+ KGAD+ +       FP+GSRAIH A+S     AL  L E   AGADLN R+  G TPLM+    D        LAREL K G    + +ADG +A+H AA  GN  ++  +L+   L+ LN+    G TP+ +A        V  LLSAGAS  G+ E N    +  A   G+  ++R++  E G++ VGG  A+ PNS+  A +  +A+IL +L++AEG+E +  WA  RL  G PL +LAAA+  +  + VLL AGA ET  +  G  A + +G  L P     P + AA+ R LQRGPAYRARS+ WP  +      D   +   RG
Sbjct:   51 GSASMIKFLVDKGADINSSTWRPGAFPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQL-PSGTLDPLEAAAIGRELQRGPAYRARSWAWPVGEDAPVAGDAGAAGALRG 390
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 2.060e-44
Identity = 131/387 (33.85%), Postives = 186/387 (48.06%), Query Frame = 1 
Query:  136 RFRDHAWCRGCRPAAADGSGEGEFEWRQEIARGRSKRGRIARAGTSPDYGRCQVEIRLLNGNTAMLKLLISKGADLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTALADTGA------LLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQ--AKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWP 1230
            R R+ A       A A   G  E +WR  IA   S                C+V          M +LLI + AD++  +               G RA+H AI+  N     +LL+AGAD +S +G G TPLMLT + +  A      ++ARE                +A+  AA      ++ ++L   P  LN     G TP+  AA+ G+ +AV HLLSAGA       ++    +  A    H  +VR++L + G+  +GG   IP ++G A   R+  A I+ ML+SAEG E    WA CR ++   LH A ++ ++ A  VLL AGA ET  N  G+ A + VG    P  +R P K+ A+VRML+RGPAYRARS+ WP
Sbjct:  119 RQRNEAGVERTLAAGASVDGSSELDWRPIIAAAAS----------------CKV---------GMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNA-PSLQRDPAKKGAIVRMLERGPAYRARSWAWP 479
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.450e-42
Identity = 130/378 (34.39%), Postives = 184/378 (48.68%), Query Frame = 1 
Query:  136 RFRDHAWCRGCRPAAADGSGEGEFEWRQEIARGRSKRGRIARAGTSPDYGRCQVEI-RLLNGNTAMLK-LLISKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTALADTGA------LLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQ--AKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWP 1230
            R R+ A       A A   G  E +WR  IA           A  S   G   + I R  N +   L  L  S G ++        G RA+H AI+  +     +LL+AGAD +S +G G TPLMLT + +  A      ++ARE                +A+  AA     +++ ++L   P  LN     G TP+  AA+ G+ +AV HLLSAGA       ++    +  A    H  +VR++L + G+  + G   IP ++G A   R+  A I+ ML+SAEG E    WA CR ++   LH A ++ ++ A  VLL AGA ET  N  G+ A + VG    P  +R P K+ A+VRML RGPAYRARS+ WP
Sbjct:  127 RQRNEAGVERTLAAGASVDGSSELDWRPIIA-----------AAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEV-----LGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNA-PSLQRDPAKKGAIVRMLARGPAYRARSWAWP 487
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.190e-36
Identity = 100/273 (36.63%), Postives = 149/273 (54.58%), Query Frame = 1 
Query:  313 NGNTAMLKLLISKGADLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLM----LTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLTAGARE 1080
            +G   ++ LL  +GA+LE               + +GS A+HAA+      +L  LL+AGAD N+ D  G TPLM    L   AD   ++ REL + GA P  ++ +GM A+H A+   + +V+ ++L      LN     G TP+  AA  G + +V  LLS GASD  L   +  +A+  A   G   +VR++L+HG++ VGGLGA+P +I  A +   AKIL ML++  GEE RR+WA     + T LH A +  S+  +  +L+AGA E
Sbjct:   46 HGRAGVVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAADRYVVV-RELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADE 317
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 7.710e-18
Identity = 107/407 (26.29%), Postives = 164/407 (40.29%), Query Frame = 1 
Query:  313 NGNTAMLKLLISKGADLE---------------TEARFPA--GSRAIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTALA--------DTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMML--EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAE--------------CRLRD------------GTPL-HLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTFDVALSSRTRGANSFGVQIYRPTGTRFF----ATRFARC 1359
            +G+  ++K L+  GA++E               T   +P   G  A+H A       A+ VLL+ GA+ NS D  G TP+M+               A +   L K GA   +++  G+ A+H AA     +V+ ++L+  P  LN   +KGFTP+                                                  ++G   VGG  AI +++  +VQ     +L +L++ EG+E +  WA                  RD            G PL H AA + ++ AI VLL+AGA     +  GK+A D +G+       R+   EAAV  +L +GPA+RARS+ WP       T + AL   +R  +   V    P G + F       F+RC
Sbjct:   50 HGHVHIIKALVRSGAEIEATCTSRVKSDGYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRPSTPNQAEMLNSLLKAGADVELEDGTGLLAIHFAASHCETQVVELLLSKAPSTLNHATHKGFTPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIADAMRTSVQYGHIDMLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAIGVYHH---ERNGSVEAAVRALLLKGPAFRARSWAWPA------TMNAALGRPSRNLHPSSVPK-TPMGWQTFQQLDVKLFSRC 446
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: T1IV76_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IV76_STRMM)

HSP 1 Score: 76.3 bits (186), Expect = 5.400e-11
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 1 
Query:  397 AIHAAISGENPTALCVLLEAGADLNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGAS-DLGVDEQNAAIFWACDGGHPRMVRMMLE 852
            A+HAA +  +  A+ VL +AGA L+  D    TPL + A+ +   ++ R L + G +   +  DGM++MH+AA +GNLE          L +N+LD+ G+TP+   +    +  V  LL  GA  ++  +EQN A+ WA   G   +  + L 
Sbjct:  498 ALHAACANGHLIAVHVLQQAGAKLDCVDDKLRTPLTV-AVENKQTVIIRYLIRAGVNLEARGEDGMTSMHIAAKMGNLEACRCFFETRKLNINLLDDGGWTPLVWGSEHRHKDVVRFLLECGADPNVRDNEQNIALHWAAFSGSSEICELFLN 649
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Match: UPI001EAFFE9E (putative ankyrin repeat protein RF_0381 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFFE9E)

HSP 1 Score: 73.9 bits (180), Expect = 1.800e-10
Identity = 79/283 (27.92%), Postives = 132/283 (46.64%), Query Frame = 1 
Query:  316 GNTAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAG-ADLNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNA-------AIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRL--RDGTP-LHLAAAWVSVRAIHVLLTAGARETLPNRYGKLASDEVGIA 1131
            G+  +LKLL+SKGADL         +  +H A    +   +  +L     D+NSR G G TP+M  AL ++  +    + ++GA     N +G + +H+A   GN E++  +L    + +N  +  G TP+ +A +RG +  +F LL +  +DL + + N        ++    D     + +  +   INR G     P  +  A+ G + ++ ++LV        +K A+  L  RDG   LHLAA  V+V     LL+    +   NR G L    V +A
Sbjct:  140 GHKEVLKLLVSKGADLTLVNNVE--NNILHVAFENRHAEIVKYILTYDLVDVNSRSGEGMTPVMFAALEESAEMF-DFIVRIGAFLSSVNTNGENILHLACIEGNSEIVKYVLGQNAVNINGKNVDGKTPVLMAVVRGYKD-IFDLLVSEGADLSIVDANGENILHKVSVVGNVDIVKHALTKKNIVQDINRKGERDRTPVMV-AAISGHK-EVFDLLV--------KKGADLTLVDRDGNSILHLAAGCVNVEIAKYLLSHNIVDI--NRKGTLNRTPVMVA 406
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M4_ECTSI8.910e-30192.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK53_9PHAE6.680e-23496.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDZ2_ECTSI1.090e-5138.32Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LSK4_ECTSI4.020e-4739.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSK8_ECTSI2.060e-4433.85Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE1.450e-4234.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAW5_9PHAE3.190e-3636.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMA6_ECTSI7.710e-1826.29Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
T1IV76_STRMM5.400e-1132.68Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
UPI001EAFFE9E1.800e-1027.92putative ankyrin repeat protein RF_0381 n=1 Tax=Ha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:2105404..2112193 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1365
Model size1367
Exons4
Ec32 orthologEc-07_000040.2
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03036,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
Ec32 orthologEc-07_000040.1
EggNOG OGsCOG0666@1,KOG0504@2759
EggNOG free text desc.response to abiotic stimulus
GOsGO:0001654,GO:0001736,GO:0001737,GO:0001738,GO:0001745,GO:0002009,GO:0002165,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007163,GO:0007164,GO:0007275,GO:0007399,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008544,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009913,GO:0009987,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0030855,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035315,GO:0035316,GO:0035317,GO:0042067,GO:0044424,GO:0044464,GO:0048513,GO:0048563,GO:0048569,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0060429,GO:0060562,GO:0071840,GO:0090596,GO:0120036
KEGG koko:K10324,ko:K21435
Seed eggNOG ortholog2880.D7G4M4
Seed ortholog evalue2.3e-238
Seed ortholog score831.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17101.1prot_E-siliculosus-1a_M_contig9.17101.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 2105404..2112193 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936417.2356114-CDS-E-siliculosus-1a_M_contig9:2105403..21054981622936417.2356114-CDS-E-siliculosus-1a_M_contig9:2105403..2105498Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2105404..2105498 +
1696251069.0442195-CDS-E-siliculosus-1a_M_contig9:2105403..21054981696251069.0442195-CDS-E-siliculosus-1a_M_contig9:2105403..2105498Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2105404..2105498 +
1622936417.2568436-CDS-E-siliculosus-1a_M_contig9:2110262..21104781622936417.2568436-CDS-E-siliculosus-1a_M_contig9:2110262..2110478Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2110263..2110478 +
1696251069.065358-CDS-E-siliculosus-1a_M_contig9:2110262..21104781696251069.065358-CDS-E-siliculosus-1a_M_contig9:2110262..2110478Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2110263..2110478 +
1622936417.277997-CDS-E-siliculosus-1a_M_contig9:2110897..21116901622936417.277997-CDS-E-siliculosus-1a_M_contig9:2110897..2111690Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2110898..2111690 +
1696251069.0792487-CDS-E-siliculosus-1a_M_contig9:2110897..21116901696251069.0792487-CDS-E-siliculosus-1a_M_contig9:2110897..2111690Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2110898..2111690 +
1622936417.2923758-CDS-E-siliculosus-1a_M_contig9:2111932..21121931622936417.2923758-CDS-E-siliculosus-1a_M_contig9:2111932..2112193Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2111933..2112193 +
1696251069.090394-CDS-E-siliculosus-1a_M_contig9:2111932..21121931696251069.090394-CDS-E-siliculosus-1a_M_contig9:2111932..2112193Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 2111933..2112193 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.17101.1

>prot_E-siliculosus-1a_M_contig9.17101.1 ID=prot_E-siliculosus-1a_M_contig9.17101.1|Name=mRNA_E-siliculosus-1a_M_contig9.17101.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=455bp
GRPQDSSGEVAHDVAEKKRGETTAVVWNCCSSWLCCRTPLFNSLHRFRDH
AWCRGCRPAAADGSGEGEFEWRQEIARGRSKRGRIARAGTSPDYGRCQVE
IRLLNGNTAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALCVLL
EAGADLNSRDGAGETPLMLTALADTGALLARELFKVGASPFVKNADGMSA
MHVAAGLGNLEVMTVILTNTPLALNVLDNKGFTPMGIAALRGQRRAVFHL
LSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSI
GVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAI
HVLLTAGARETLPNRYGKLASDEVGIALRPPARRSPRKEAAVVRMLQRGP
AYRARSYGWPTLDGGNGTFDVALSSRTRGANSFGVQIYRPTGTRFFATRF
ARCEN
back to top

mRNA from alignment at E-siliculosus-1a_M_contig9:2105404..2112193+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.17101.1 ID=mRNA_E-siliculosus-1a_M_contig9.17101.1|Name=mRNA_E-siliculosus-1a_M_contig9.17101.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6790bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:2105404..2112193+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGCAGGCCTCAGGACAGCTCAGGAGAGGTAGCTCACGACGTAGCAGAGAA
GAAACGCGGGGAAACTACTGCTGTTGTTTGGAACTGCTGCAGCAGGTGGG
TGCGGCCATGGGATCCCGGGAGTGGTACCTACGAGAAGCGCGCACGTTGG
TTGCCCCGCATGTCTTTGCATTTTTTTGAATACTTTTACGCATGGACGCA
TGGTCAGGGCCATCTCGACCCACACGTGCTTCTAGTCTATTTACCAGAAG
ACTACGAGTGATGACACCCCTCGGAGTGATGGTGCTGGCTCAGGGTACCA
TACGCTGAAAAACACGTGGACAATGCTTGGGGATTTGATTGGTTTGTGAC
ACCTCCAAGAAACCCTCCTTCGGGCGCGAAGGTTGCGTACTGCGGGGTTG
GGACACTCAGTCTATGCTGGACTGCAACCATTCGTCGAAGGCCTTCGGTG
TTGGCGCGTATCACCGGGGGTTTGGCTGTTCTTATGCATATATGTTTGAC
GTGTTTGGGCATGTTGATAGTCTCTGACGTCCGGGTCAGCTGGGCACAGC
AGCGGGAACGTTAGGCACTTGAACAGAGATCGGATCTCGGAACGGCCTTG
AGTAATCATGCCAACATGTGGTGCACTGGTAGGAATGAGAAAGGTTGTGT
CCAAGACGCACTAACCGGAGTTTCTGAATTGCACCGGGGTGCCTAGCACC
AGTACAGCCGGTTGGAGGTGTGTTTTGTGTACCCCTCGGAGTCATGTATA
CCTCACCCACCAATTGTTTTGTGATGCACTCAAGTTGACACATGCAGGGT
TTGATTTCTCCACCGGAGGTTGTCACGAAGTCTACAGCAGTACCTCCACA
CACCCCATCTCAAACCGAGAGTGTGATAAGAGACAAGAACAAGTTTTTAA
GTTTTGTCGCCACCAGTGGATCACGGAGTCTACCTCCATACATGGTCTCC
CTCGATATCCAAGTTAAATTTCCGCAAGTCTACAATCAAGAGACATAGGC
CGCACGGCGGGTGCTCGAGCAGGTTCTGTGCGTTGTACCACTAGAGGGCA
TCATAGAGCAAAGACATGCGCAAATCCAGATCTGATACTGGTGCCGCGTG
GTCCAAGACTGCAGCTGCGGGCCTATTACTCAGCAAATCTGAGTCCATAA
CGTTTACAGCCCACTGCTGTACGCGCCGTCGCAGACCCAACCTCCGGAAT
TGCGGGTACTGCAGCGGTCCTGTAGCTCAATACCGCCAGCTGCCTTAGAC
GACACGAGGTCATAGGATTGGGTTCGTGGCGGCGAGCAAAGCATTGTCAA
ACGGTTGGTGGTCTGGATCCAGACTGGGGGAGTTGTTTTTTATTCCAACC
TACAAATGCGAGGGATAGCGCACACCCTAGACTGGCCTTCCAAACCCCGA
TTGCTCCACAACCAACTGGCCTCGAAAATCGACCGATATGTGCGAAGAAC
GATCTCGGCGAGATCTTTCGAAGACCAATCATACCGGTATTGACATCCTG
TTGGTTGCGGGGCAATCGAGCCACGAAAGTCGGTCTAGAAGGTGCGCGAT
GACTTGCACTTGGACGGTGCGTCAAGCCACCCCCCCAGCAACAAATCAGA
GTTTACAAAAAGCGCATCTCACTGGTCCATGATGTCCTCTACTGATACAG
CACACTCCAAAGATCGGGATCGGTGGTTGAGTCAAGCGTGTCCACCTCCA
GCGATACGTGTTATTGCTCGCTTGCTCGCAGGCATTTTTACGTTCATGCC
TGAGCAGGCAACCACACGTCCTTTGGACCAGATTGTCATGGTGAACCCTT
GGGTCCCATTGTCGGCACGGCCCGCTCTTTTTTCTCTGATCAAGGGGGCT
CACAGGAGAGAATTCAGGACCGCACAGCTACCCACGCTCGGCCATGTTTG
TCGTGCTCTTGTTCCAGTTCGGTTTTATTCAGGAATTGACGTAGGGGGGC
CGTGGGGATAAAAGTCCAGTGAACCTATGTATTCTGGCAAACGTATCTTC
TGCGTGACCCCCTGATCAAATGTGTGCATATTCGTATGTTCCTTGTATCC
TCCCTCTCCCGGCTACTCCAGATGTTGCCCTTAGACCAGATTGGGGCTGT
GCAGTCCTGGAAAGTTACTCCCGTGCCCCCCCTTTTTCCTATGGATGCTT
CCGTGACGACGTGATGACATCATGAATCTCCCAGAGTACTGAAGCTTCAG
AGTACTGAAGCTTCAAGGTTTAGCTCACCTCATAATGCATTCGGGGTTAC
GATATAGTTCCCCCCGATATTTTTTAGGTATTTCAGGCCGCCGAGCACCA
GCCCCTTCCCCTGAGGTTGCGAGGAAGCTTTAAAGTGTCCCCGGCGCGTT
GTAAGGTTTACACAATCAATTTTGTTCGCCACAGCCACCCCGACGGCTCC
ATGTTGACATCAAATATTATAAACCGCGTCGATATTGCGTTGCTTTTCAG
CGTGTAGTCAGTGGGGAATGTGGCAAGCCCTGTTTGTGCAAAAGTCTTTG
ATATGTTCTCATCGAGGCCTGTGTCACTGTGTATACCGACAAGTTTTCCC
AACGTAACGCATGTTTGAGAATTTGGAACGGCCAAAAACCACGTTAGACC
TATCTTTATGGGGGCACAATCTTTGGGATAAATCTCGATCTTGGGCCATA
TCAGTTTCAAGGTTTTTGGGAAACAATTTTTCGGAAAAAAACTCCACCAA
GATTTGTCCGGGCCCCAAAAGTTGCCCGAACGAACAAATCGTAATCGTTT
CCCAAGATTTGTCCAGCAAGCTCAGGACAAATCTTGGGCGGCGATGCTTG
GTTGGTGCGGCGAGATTACCACAGGTCAGTCAACCTTGTCGTCCACAACG
CTTTGAAATCTGCACGTGGCACATTCGCAAGGGCCTCCAATGCACCCTGG
CTTTACTAGCTGTGTCGATGCCACGGGCGCCGACAGCGGAGAAAAACGAC
CAAGGCGCGCGATTTTTTTTTTTGCCCTGGCTGGTGCCGCGTGCGCCATC
AACGGAGAGCACGCATCTCCAATTTGAGAGCGGACAGCACTCGTTCACAT
CTCTCATAACGTAGTTGACGCATCGAGGCCAAGCCTTCGATGCTGCCACC
TCCACTAACCGTTGTCTCTCGGATGCAAGTGAGGTGGTTGTGGGGTGCTC
CATTATCCAGAGAAAAATGCATCGTTGGTGACCCGAACTGTTGCTTCATC
TGTGGAGGGACCGTTCAACGAGCTCTACTTTCAAGTAGATAAATGAGCCG
GCGGAACGTTTTTCCACAACAGCTCAGTCGTGTGCGATGCTTGCATCTCT
TGATCGAATCACCTCACACCCAAGCCGTTAGCTCCCCAAACAGATCTGTG
AGTGCAGATGACTGCACCGAAGGTTTGACCTCGGAGGGCCTACTACGTAG
TGAGATACCCTGCACTTGCCATCGCCTGTCGGGTTGATGTACACGTTTGG
CCGTTGGACAGCAACGGAGCAGTTTTGTTTCTCCGCGTGCATGACACCGC
GGGCAGCGTCGCCTCTTTGTGCACCCCAGGTGGGCGCCCACCGCTGGAAT
TCACCCGTAGTGTTGAGCCTATGCAGCTATGGGAGGGACGTTGCCTTCTA
GGACTGCGTCGTGTTTAGTTTTCGTGACACCGTGGTATTTTCTGGACCAA
GTGGCAGTTGCGCCTTTTCTCAACTTCAAGAAGACAAGACGGACAACATG
CCGCCTGTTTCAACATTCCACAACATTCCACTCCCCCCCCCCCATAAATG
CCCCCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCCTCGCTTGGCAAC
GACGTTGTAAAACAAGCCCCCCCCCCCCGGTGTTTGCCATCGGGGTGGGT
TTTCGTCGCTTGGCAGCGACGTTGTAAAACAAGCCCCCTCCTCGGTGTTT
GCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGC
CAATTCACTTCGTGAACTCGGCAACCAGGTTACCTTTTTTTTTTTTACCT
CTTTTTTTTTTTTTGGCGGTAACCATAATGGTGGTCGAGTAGATCATGTT
GTGCGGAGTGGAGAACCCTCACTCCGCGCAAGGGGGATGATCGCACCACG
TTGTGTTAAAATGGTCAAGCATCCTTGAGACAGTTACACAGTGCTTACAA
CTGCCTCTGGAAGTACAAGCACCAGAAAATAAATTAAGTCATACGCAGCT
GTCATCCGTACGCAAGGAAGTAAGCACAAGGTGCCGAACACCCTTAGCAG
GATGCAGCTCACCCTTCATGCGGCTCGCCGAATACCTCACGGCGCTTCGC
GCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCC
CGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGCACG
ACTATGAGTACACCCCCCCCATAAATCGCGATGCATCATATCTTGGCGAA
TATTTATCCCGAACACTGCTGTGTCCCCATTTTAAGATGGGTCTTACAGA
TTCGTTTTTTGGCATACGCATTCAGCGCGTTTCTCATTTTTTATTTATCC
CGTACCGGCGGTCTTGATTTTTCCGCCAGCACTGACATATTTTGGTTGGT
CAGCCGACTGACGCGGCGGATACTAATTGGTACACCAAACGCGCATGCTT
ACCCATGAGAGACAGGGTAAATTGAGTGAGGACAACTCCTTCTTCTTTGC
GTGTTTCGTGTGCAGGGGTGGGGACGTGGGTCCTTGTAAGGGCGGCGAGG
GGTAAGAAAACCAAGCATACATTCGAGATTCGCTGGAGCATCAGCTTCAA
CAAACGGCTCAATTTTTTGTTGCGTTCTGCTCCGTGTCTTCCCGTGATTT
GGCCCAAAGTTGGTTGTGTTGCAGGACACCGCTATTCAATAGTCTCCACC
GGTTCCGTGACCATGCCTGGTGCCGCGGCTGCCGACCGGCGGCTGCTGAT
GGAAGTGGAGAAGGGGAGTTTGAGTGGCGTCAAGAAATTGCTCGCGGGCG
GAGCAAACGTGGACGGATCGCGCGAGCTGGAACATCCCCCGATTATGGGC
GCTGCCAGGTAGAAATAAGACTGCTGTACACAGGTTTGCGTGTTTTTTCC
TCTTTTGTTCGTTGATGTTCCGTGAGATGTACGAGTCAACAGCACGGCAG
CTGCGTGAACGCTGTTCGAGCTTCGGAAACGTCACTGATGGCAATTGATG
GCTGATTTACACCAACACATGCTTCACTTTCATCTTGCAATCCGTCTTGA
CGACACTACTACCATGCTCTGATCAGCCCACTCCGGAGGCGCGCCTTGCA
ACGTGGCCGTTGGCATTGCTTCTGCATTGCGGGTGCCGACGGAGAGTACC
GAGATAGTGCTATACGCTAGTCTACAGTAGCTGCGACGGTCACGGATATT
TCTGGCGACTGGACGCTGTCTGAAGTATGAGGTACGCCAATCGTGCGCTT
CTTGGCGATCTTATTTTTTCTTTCTCTGACGCTCTTTTTTCCAGAAACGG
CAATACCGCCATGCTCAAGCTTCTGATATCTAAAGGTGCCGATCTGGAGA
CTGAGGCGCGTTTCCCAGCAGGGAGCAGAGCAATCCACGCCGCTATATCT
GGGGAGAATCCTACTGCCTTATGCGTCCTACTGGAGGCTGGGGCCGACTT
GAACAGCCGCGATGGTGCAGGGGAAACTCCACTTATGTTGACAGCTCTTG
CTGACACAGGAGCTCTACTGGCACGGGAACTTTTCAAGGTCGGGGCCAGT
CCTTTCGTGAAGAACGCCGATGGCATGAGCGCGATGCACGTAGCGGCAGG
CCTGGGCAACCTTGAAGTCATGACGGTGATCTTGACGAACACACCATTGG
CGCTCAACGTCCTCGACAACAAGGGGTTTACCCCTATGGGCATTGCTGCA
CTGAGGGGCCAGCGGCGTGCGGTTTTCCATCTTCTGTCGGCAGGGGCGAG
CGACCTGGGGGTCGATGAACAGAATGCGGCAATTTTCTGGGCTTGCGACG
GAGGCCATCCACGCATGGTTCGTATGATGCTCGAACACGGCATCAACAGG
GTTGGGGGGCTGGGTGCGATCCCCAACTCTATTGGCGTGGCAGTGCAGGG
TCGGCAGGCCAAAATTCTGGAAATGCTGGTTTCCGCCGAGGGAGAGGAGA
ACCGACGGAAGTGGGCCGAGTGCCGGTTGAGGGACGGTACTCCGCTTCAC
CTGGCTGCAGCATGGGTCTCTGTGAGGGCGATACATGTTCTTCTCACGGC
TGGAGCGAGGGAGACACTACCCAACCGCTATGGCAAGGTATGTGTGTTTG
TTTCCATAGAGGCCGGGCTTTAGTCGCCGATGGTGGTTGTATCATGTACA
CGCAGTCCCACGTGTAAGTCATGGAGCGGCAGAAATGTTCCAAGGGTTTT
TGCAGTTGCGTTGTGATAGTTTGATAATTCACGGGTAGGGGGCTCAACGG
TACGAATAAGAGCATTCACCGATAGAGGCAAACACGTTCGTCCCCCCCTC
CCTCTCTTTTTCTGCGCTTGCACGTGAAGCTTGCCAGCGATGAGGTTGGG
ATAGCCTTGAGGCCACCCGCCAGGAGGAGTCCACGGAAGGAGGCGGCCGT
CGTTCGTATGCTGCAGAGGGGACCCGCTTACCGTGCTCGATCGTACGGTT
GGCCCACCCTAGATGGCGGCAATGGTACTTTTGACGTGGCCCTCTCGTCG
AGAACCAGGGGAGCGAACTCCTTTGGGGTGCAGATTTATCGTCCGACGGG
TACGAGATTCTTCGCAACCCGGTTCGCCAGGTGCGAAAAT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:2105404..2112193+

>mRNA_E-siliculosus-1a_M_contig9.17101.1 ID=mRNA_E-siliculosus-1a_M_contig9.17101.1|Name=mRNA_E-siliculosus-1a_M_contig9.17101.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2730bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:2105404..2112193+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGCAGGCCTCAGGACAGCTCAGGAGAGGTAGCTCACGACGTAGCAGAGAA
GAAACGCGGGGAAACTACTGCTGTTGTTTGGAACTGCTGCAGCAGGGCAG
GCCTCAGGACAGCTCAGGAGAGGTAGCTCACGACGTAGCAGAGAAGAAAC
GCGGGGAAACTACTGCTGTTGTTTGGAACTGCTGCAGCAGTTGGTTGTGT
TGCAGGACACCGCTATTCAATAGTCTCCACCGGTTCCGTGACCATGCCTG
GTGCCGCGGCTGCCGACCGGCGGCTGCTGATGGAAGTGGAGAAGGGGAGT
TTGAGTGGCGTCAAGAAATTGCTCGCGGGCGGAGCAAACGTGGACGGATC
GCGCGAGCTGGAACATCCCCCGATTATGGGCGCTGCCAGGTAGAAATAAG
ACTGCTTTGGTTGTGTTGCAGGACACCGCTATTCAATAGTCTCCACCGGT
TCCGTGACCATGCCTGGTGCCGCGGCTGCCGACCGGCGGCTGCTGATGGA
AGTGGAGAAGGGGAGTTTGAGTGGCGTCAAGAAATTGCTCGCGGGCGGAG
CAAACGTGGACGGATCGCGCGAGCTGGAACATCCCCCGATTATGGGCGCT
GCCAGGTAGAAATAAGACTGCTAAACGGCAATACCGCCATGCTCAAGCTT
CTGATATCTAAAGGTGCCGATCTGGAGACTGAGGCGCGTTTCCCAGCAGG
GAGCAGAGCAATCCACGCCGCTATATCTGGGGAGAATCCTACTGCCTTAT
GCGTCCTACTGGAGGCTGGGGCCGACTTGAACAGCCGCGATGGTGCAGGG
GAAACTCCACTTATGTTGACAGCTCTTGCTGACACAGGAGCTCTACTGGC
ACGGGAACTTTTCAAGGTCGGGGCCAGTCCTTTCGTGAAGAACGCCGATG
GCATGAGCGCGATGCACGTAGCGGCAGGCCTGGGCAACCTTGAAGTCATG
ACGGTGATCTTGACGAACACACCATTGGCGCTCAACGTCCTCGACAACAA
GGGGTTTACCCCTATGGGCATTGCTGCACTGAGGGGCCAGCGGCGTGCGG
TTTTCCATCTTCTGTCGGCAGGGGCGAGCGACCTGGGGGTCGATGAACAG
AATGCGGCAATTTTCTGGGCTTGCGACGGAGGCCATCCACGCATGGTTCG
TATGATGCTCGAACACGGCATCAACAGGGTTGGGGGGCTGGGTGCGATCC
CCAACTCTATTGGCGTGGCAGTGCAGGGTCGGCAGGCCAAAATTCTGGAA
ATGCTGGTTTCCGCCGAGGGAGAGGAGAACCGACGGAAGTGGGCCGAGTG
CCGGTTGAGGGACGGTACTCCGCTTCACCTGGCTGCAGCATGGGTCTCTG
TGAGGGCGATACATGTTCTTCTCACGGCTGGAGCGAGGGAGACACTACCC
AACCGCTATGGCAAGAAACGGCAATACCGCCATGCTCAAGCTTCTGATAT
CTAAAGGTGCCGATCTGGAGACTGAGGCGCGTTTCCCAGCAGGGAGCAGA
GCAATCCACGCCGCTATATCTGGGGAGAATCCTACTGCCTTATGCGTCCT
ACTGGAGGCTGGGGCCGACTTGAACAGCCGCGATGGTGCAGGGGAAACTC
CACTTATGTTGACAGCTCTTGCTGACACAGGAGCTCTACTGGCACGGGAA
CTTTTCAAGGTCGGGGCCAGTCCTTTCGTGAAGAACGCCGATGGCATGAG
CGCGATGCACGTAGCGGCAGGCCTGGGCAACCTTGAAGTCATGACGGTGA
TCTTGACGAACACACCATTGGCGCTCAACGTCCTCGACAACAAGGGGTTT
ACCCCTATGGGCATTGCTGCACTGAGGGGCCAGCGGCGTGCGGTTTTCCA
TCTTCTGTCGGCAGGGGCGAGCGACCTGGGGGTCGATGAACAGAATGCGG
CAATTTTCTGGGCTTGCGACGGAGGCCATCCACGCATGGTTCGTATGATG
CTCGAACACGGCATCAACAGGGTTGGGGGGCTGGGTGCGATCCCCAACTC
TATTGGCGTGGCAGTGCAGGGTCGGCAGGCCAAAATTCTGGAAATGCTGG
TTTCCGCCGAGGGAGAGGAGAACCGACGGAAGTGGGCCGAGTGCCGGTTG
AGGGACGGTACTCCGCTTCACCTGGCTGCAGCATGGGTCTCTGTGAGGGC
GATACATGTTCTTCTCACGGCTGGAGCGAGGGAGACACTACCCAACCGCT
ATGGCAAGCTTGCCAGCGATGAGGTTGGGATAGCCTTGAGGCCACCCGCC
AGGAGGAGTCCACGGAAGGAGGCGGCCGTCGTTCGTATGCTGCAGAGGGG
ACCCGCTTACCGTGCTCGATCGTACGGTTGGCCCACCCTAGATGGCGGCA
ATGGTACTTTTGACGTGGCCCTCTCGTCGAGAACCAGGGGAGCGAACTCC
TTTGGGGTGCAGATTTATCGTCCGACGGGTACGAGATTCTTCGCAACCCG
GTTCGCCAGGTGCGAAAATCTTGCCAGCGATGAGGTTGGGATAGCCTTGA
GGCCACCCGCCAGGAGGAGTCCACGGAAGGAGGCGGCCGTCGTTCGTATG
CTGCAGAGGGGACCCGCTTACCGTGCTCGATCGTACGGTTGGCCCACCCT
AGATGGCGGCAATGGTACTTTTGACGTGGCCCTCTCGTCGAGAACCAGGG
GAGCGAACTCCTTTGGGGTGCAGATTTATCGTCCGACGGGTACGAGATTC
TTCGCAACCCGGTTCGCCAGGTGCGAAAAT
back to top