mRNA_E-siliculosus-1a_M_contig9.17089.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: D7G4L3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L3_ECTSI) HSP 1 Score: 486 bits (1250), Expect = 3.410e-169 Identity = 277/279 (99.28%), Postives = 277/279 (99.28%), Query Frame = 1
Query: 1 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 837
RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA AA EAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS
Sbjct: 118 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA-AADEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 395
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A6H5KKI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI7_9PHAE) HSP 1 Score: 471 bits (1212), Expect = 5.200e-165 Identity = 270/279 (96.77%), Postives = 272/279 (97.49%), Query Frame = 1
Query: 1 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 837
RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA AAGEAANDAFGLK EVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEG XXXXXXXXXXXLSEEDRLYTIP+DFKKKVEEAKVEFDTGANRG+EMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS
Sbjct: 39 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA-AAGEAANDAFGLKAEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGXXXXXXXXXXXXXXXXLSEEDRLYTIPDDFKKKVEEAKVEFDTGANRGNEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 316
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7R9U2X2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X2_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.010e-16 Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 1
Query: 13 LTDLREEQRARRKGGG---RSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEE--GADAKEXXXXXXXXXXXLSEEDRLYTIPEDFK-KKVEEAKVEFDTGANRGDEMDGEV-GSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQ 777
L ++R EQR RR+ GG ++ GG QA GT A+AA EA++ E AP TM + S +++ + HE LM+ Y++ K+GG++ +DA + ED+LYT+PE + +K ++ E D RG+ +D E G+G +AW +G+AE+ALPIE K +N+E T A ++ ++ + P A S G+++ NYS H++E+A +IR L R A A Q
Sbjct: 53 LAEIRAEQRGRRRAGGIPPEKLATRAGGPVQAA-------------GTEAKAAAEASS-------EPGAPKTLTMTQFMGTS--------SSNLTVEMQHENLMKAYIEKKLGGQKRKASDA-------------ATPEDQLYTLPEHLRVQKQQKLDGEKD---KRGETIDAETDGAGGPLAWGSGIAEVALPIEEKRRNVEATERAIKALKELQEKGASDPLAVRSEDGNVSVNYSKHRREYAQEIRLLSERAAKARNDQ 270
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A836CP27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP27_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.200e-15 Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 445 KKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARR--------------NAPGASSSLSGSLTANYSHHQKEWALQIR 738
K+ V EAK F G + D++DGE+G GAQIAWNTG+AE+ LPI+ K++N+E T AAR + RR A A S L GS TANYSHH KE+A ++R
Sbjct: 2 KRTVHEAKAMF--GTFKADDLDGEIGQGAQIAWNTGIAEVDLPIDVKMRNIEATKAARAAF--IARTRRXXXXXXXXXXXRGDEAAEAPSELIGSFTANYSHHSKEYAAKMR 109
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7S2FKP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKP9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.300e-14 Identity = 65/211 (30.81%), Postives = 108/211 (51.18%), Query Frame = 1
Query: 1 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGA--DAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKM 627
+L+LL +LR EQR RR+ G S S L+ A +D L + + + + GL+ E P++ +M + F TG G D G HEQ ME++++++M + G + + ++EED+LY IP++FK K + V D N+ + GE A + NTG+AE++LP++F+L+N++ T AR K+
Sbjct: 21 KLELLAELRNEQRDRRRAVGLSSSKLL-----AISEDGLRKREKKRE-----------EEEKGLQDEAAGPDLKELMTNQF----TGQIGQGQD--GGKAHEQRMEEFIEEQMTEKMGIKKEKDQSNESAEDGSQAMTEEDKLYLIPDEFKSKPRD--VGDDGTFNKREGFSGEA---APLFMNTGIAEVSLPLDFRLRNIQKTDEARAKL 204
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: W7TWM8_9STRA (Hepatocellular carcinoma-associated antigen 59 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM8_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 4.080e-13 Identity = 61/180 (33.89%), Postives = 93/180 (51.67%), Query Frame = 1
Query: 214 NISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNR 753
+I MMES+F TG D HE++MEQY+++++G + + +S ++L I E+ A+ G D +G VG GA IA++TG+AE+ALP+EFKL+N+E T AR E R+ + GSLT NY HH+KE+A+ +RA + +
Sbjct: 76 SIGEMMESSF----TGMKYVTKDDTNV--HERIMEQYIEERLGNVKEEAPEVVVPSEAVPPSKVSRREQLLAITEEIH-----ARARGPAGDKAAD-AEGGVGEGAPIAFSTGIAEVALPVEFKLQNIEATERARLLQEEQLLLRQQGEK-KGEIIGSLTHNYHHHRKEYAINMRAREGK 242
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7S2WSH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSH1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.250e-12 Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 301 HEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIR 738
HE+ ME+++ +++G + D E EED LY IPE + V A VE G G A + NTG+AE+ LP+ F+LKN+EDT R KM+ R RR S +GS +NY+HH++E A+ ++
Sbjct: 149 HEKRMEEFINERLGKKPAGDEDEKAAEAVPQSKR--EEDALYQIPELAPEAVGGASVE------------GGTGHAAPLFMNTGIAEVNLPMRFRLKNIEDTDKLRAKMDGERPTRRPQESGSGLPTGSFNSNYNHHRREHAMMMK 280
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A482REQ4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REQ4_9ARCH) HSP 1 Score: 58.2 bits (139), Expect = 7.030e-7 Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 484 GANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSL------SGSLTANYSHHQKEWALQIR 738
GA+ G DG+VG G + TG+AE+ALP E KL+N+E+T R +M RAAR L SGS+TANY+ H++E+A+ ++
Sbjct: 5 GADSG--RDGDVGEGGMMLAGTGIAEVALPTEEKLRNIEETERLRQQMLERRAARAAEMADDGGLPHARYTSGSITANYTMHRREFAMNMK 93
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7S2CXJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXJ2_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 7.200e-6 Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 262 GWGAAADSAGSVPHEQLMEQYVKDKMGGE-EGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKM 627
G G D A HE+ ME+Y+ ++MG + EG D ++EE++LY +PE+ K E D +G G A + NTG+AE+ LP++F+L N+E T A R +
Sbjct: 4 GLGVQEDKA----HEKRMEEYIAEQMGDKVEGGD--------DDGGREMTEEEKLYLVPEELKSSNNANISEQD--------REGYSGQAAPLFMNTGIAEVELPMQFRLANIERTDAMRQTL 106
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: B4FSC7_MAIZE (Hepatocellular carcinoma-associated antigen 59 family protein n=6 Tax=Andropogoneae TaxID=147429 RepID=B4FSC7_MAIZE) HSP 1 Score: 55.1 bits (131), Expect = 3.780e-5 Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 415 DRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIR 738
D LYT+P+ K K + ++ + W TG+AE+ LPIE+KL+N+E+T AA+ ++ R AR+ P A+ + S +A+Y H KE+ ++R
Sbjct: 124 DELYTVPDHLKVKKKNSEE-------------------SSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRLARKPKPDAN--IPSSYSADYFHRGKEYDEKLR 210 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17089.1 >prot_E-siliculosus-1a_M_contig9.17089.1 ID=prot_E-siliculosus-1a_M_contig9.17089.1|Name=mRNA_E-siliculosus-1a_M_contig9.17089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=295bp RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1965233..1967915- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17089.1 ID=mRNA_E-siliculosus-1a_M_contig9.17089.1|Name=mRNA_E-siliculosus-1a_M_contig9.17089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2683bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1965233..1967915- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1965233..1967915- >mRNA_E-siliculosus-1a_M_contig9.17089.1 ID=mRNA_E-siliculosus-1a_M_contig9.17089.1|Name=mRNA_E-siliculosus-1a_M_contig9.17089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1770bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1965233..1967915- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |