mRNA_E-siliculosus-1a_M_contig9.17089.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17089.1
Unique NamemRNA_E-siliculosus-1a_M_contig9.17089.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: D7G4L3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L3_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 3.410e-169
Identity = 277/279 (99.28%), Postives = 277/279 (99.28%), Query Frame = 1
Query:    1 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 837
            RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA AA EAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS
Sbjct:  118 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA-AADEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 395          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A6H5KKI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI7_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 5.200e-165
Identity = 270/279 (96.77%), Postives = 272/279 (97.49%), Query Frame = 1
Query:    1 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 837
            RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA AAGEAANDAFGLK EVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEG     XXXXXXXXXXXLSEEDRLYTIP+DFKKKVEEAKVEFDTGANRG+EMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS
Sbjct:   39 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGA-AAGEAANDAFGLKAEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGXXXXXXXXXXXXXXXXLSEEDRLYTIPDDFKKKVEEAKVEFDTGANRGNEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQTKAPTKSGPGMAASAQLSGS 316          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7R9U2X2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.010e-16
Identity = 84/262 (32.06%), Postives = 132/262 (50.38%), Query Frame = 1
Query:   13 LTDLREEQRARRKGGG---RSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEE--GADAKEXXXXXXXXXXXLSEEDRLYTIPEDFK-KKVEEAKVEFDTGANRGDEMDGEV-GSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNRQAMAEESQ 777
            L ++R EQR RR+ GG     ++   GG  QA              GT A+AA EA++       E  AP   TM +    S        +++    + HE LM+ Y++ K+GG++   +DA              + ED+LYT+PE  + +K ++   E D    RG+ +D E  G+G  +AW +G+AE+ALPIE K +N+E T  A   ++ ++    + P A  S  G+++ NYS H++E+A +IR L  R A A   Q
Sbjct:   53 LAEIRAEQRGRRRAGGIPPEKLATRAGGPVQAA-------------GTEAKAAAEASS-------EPGAPKTLTMTQFMGTS--------SSNLTVEMQHENLMKAYIEKKLGGQKRKASDA-------------ATPEDQLYTLPEHLRVQKQQKLDGEKD---KRGETIDAETDGAGGPLAWGSGIAEVALPIEEKRRNVEATERAIKALKELQEKGASDPLAVRSEDGNVSVNYSKHRREYAQEIRLLSERAAKARNDQ 270          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A836CP27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP27_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.200e-15
Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 1
Query:  445 KKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARR--------------NAPGASSSLSGSLTANYSHHQKEWALQIR 738
            K+ V EAK  F  G  + D++DGE+G GAQIAWNTG+AE+ LPI+ K++N+E T AAR     +   RR               A  A S L GS TANYSHH KE+A ++R
Sbjct:    2 KRTVHEAKAMF--GTFKADDLDGEIGQGAQIAWNTGIAEVDLPIDVKMRNIEATKAARAAF--IARTRRXXXXXXXXXXXRGDEAAEAPSELIGSFTANYSHHSKEYAAKMR 109          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7S2FKP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKP9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.300e-14
Identity = 65/211 (30.81%), Postives = 108/211 (51.18%), Query Frame = 1
Query:    1 RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTGAEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGA--DAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKM 627
            +L+LL +LR EQR RR+  G S S L+     A  +D L  + +  +            +  GL+ E   P++  +M + F    TG  G   D  G   HEQ ME++++++M  + G   +  +           ++EED+LY IP++FK K  +  V  D   N+ +   GE    A +  NTG+AE++LP++F+L+N++ T  AR K+
Sbjct:   21 KLELLAELRNEQRDRRRAVGLSSSKLL-----AISEDGLRKREKKRE-----------EEEKGLQDEAAGPDLKELMTNQF----TGQIGQGQD--GGKAHEQRMEEFIEEQMTEKMGIKKEKDQSNESAEDGSQAMTEEDKLYLIPDEFKSKPRD--VGDDGTFNKREGFSGEA---APLFMNTGIAEVSLPLDFRLRNIQKTDEARAKL 204          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: W7TWM8_9STRA (Hepatocellular carcinoma-associated antigen 59 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.080e-13
Identity = 61/180 (33.89%), Postives = 93/180 (51.67%), Query Frame = 1
Query:  214 NISTMMESAFKSGGTGGWGAAADSAGSVPHEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQNR 753
            +I  MMES+F    TG      D      HE++MEQY+++++G  +    +            +S  ++L  I E+       A+     G    D  +G VG GA IA++TG+AE+ALP+EFKL+N+E T  AR   E     R+        + GSLT NY HH+KE+A+ +RA + +
Sbjct:   76 SIGEMMESSF----TGMKYVTKDDTNV--HERIMEQYIEERLGNVKEEAPEVVVPSEAVPPSKVSRREQLLAITEEIH-----ARARGPAGDKAAD-AEGGVGEGAPIAFSTGIAEVALPVEFKLQNIEATERARLLQEEQLLLRQQGEK-KGEIIGSLTHNYHHHRKEYAINMRAREGK 242          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7S2WSH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSH1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.250e-12
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 1
Query:  301 HEQLMEQYVKDKMGGEEGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIR 738
            HE+ ME+++ +++G +   D  E             EED LY IPE   + V  A VE            G  G  A +  NTG+AE+ LP+ F+LKN+EDT   R KM+  R  RR     S   +GS  +NY+HH++E A+ ++
Sbjct:  149 HEKRMEEFINERLGKKPAGDEDEKAAEAVPQSKR--EEDALYQIPELAPEAVGGASVE------------GGTGHAAPLFMNTGIAEVNLPMRFRLKNIEDTDKLRAKMDGERPTRRPQESGSGLPTGSFNSNYNHHRREHAMMMK 280          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A482REQ4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REQ4_9ARCH)

HSP 1 Score: 58.2 bits (139), Expect = 7.030e-7
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 1
Query:  484 GANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSL------SGSLTANYSHHQKEWALQIR 738
            GA+ G   DG+VG G  +   TG+AE+ALP E KL+N+E+T   R +M   RAAR         L      SGS+TANY+ H++E+A+ ++
Sbjct:    5 GADSG--RDGDVGEGGMMLAGTGIAEVALPTEEKLRNIEETERLRQQMLERRAARAAEMADDGGLPHARYTSGSITANYTMHRREFAMNMK 93          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: A0A7S2CXJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXJ2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.200e-6
Identity = 40/123 (32.52%), Postives = 61/123 (49.59%), Query Frame = 1
Query:  262 GWGAAADSAGSVPHEQLMEQYVKDKMGGE-EGADAKEXXXXXXXXXXXLSEEDRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKM 627
            G G   D A    HE+ ME+Y+ ++MG + EG D              ++EE++LY +PE+ K        E D         +G  G  A +  NTG+AE+ LP++F+L N+E T A R  +
Sbjct:    4 GLGVQEDKA----HEKRMEEYIAEQMGDKVEGGD--------DDGGREMTEEEKLYLVPEELKSSNNANISEQD--------REGYSGQAAPLFMNTGIAEVELPMQFRLANIERTDAMRQTL 106          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Match: B4FSC7_MAIZE (Hepatocellular carcinoma-associated antigen 59 family protein n=6 Tax=Andropogoneae TaxID=147429 RepID=B4FSC7_MAIZE)

HSP 1 Score: 55.1 bits (131), Expect = 3.780e-5
Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 1
Query:  415 DRLYTIPEDFKKKVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNMEDTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIR 738
            D LYT+P+  K K + ++                    +   W TG+AE+ LPIE+KL+N+E+T AA+  ++  R AR+  P A+  +  S +A+Y H  KE+  ++R
Sbjct:  124 DELYTVPDHLKVKKKNSEE-------------------SSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRLARKPKPDAN--IPSSYSADYFHRGKEYDEKLR 210          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G4L3_ECTSI3.410e-16999.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KKI7_9PHAE5.200e-16596.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9U2X2_9STRA3.010e-1632.06Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A836CP27_9STRA2.200e-1546.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FKP9_9STRA6.300e-1430.81Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TWM8_9STRA4.080e-1333.89Hepatocellular carcinoma-associated antigen 59 n=2... [more]
A0A7S2WSH1_9STRA4.250e-1234.93Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A482REQ4_9ARCH7.030e-741.76Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2CXJ2_9STRA7.200e-632.52Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
B4FSC7_MAIZE3.780e-532.41Hepatocellular carcinoma-associated antigen 59 fam... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1965233..1967915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size885
Model size887
Exons5
Ec32 orthologEc-07_000170.1
Ec32 ortholog descriptionHepatocellular carcinoma-associated antigen 59
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko01003
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
CAZyGT25
COG Functional cat.S
EC2.4.1.50
EggNOG OGsKOG3345@1,KOG3345@2759
EggNOG free text desc.Hepatocellular carcinoma-associated antigen 59
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0007275,GO:0008150,GO:0009314,GO:0009416,GO:0009628,GO:0009637,GO:0009642,GO:0009644,GO:0009892,GO:0010099,GO:0010605,GO:0016604,GO:0016607,GO:0019222,GO:0022622,GO:0031323,GO:0031324,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0048364,GO:0048519,GO:0048523,GO:0048580,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051239,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0055121,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0080022,GO:0080090,GO:0099402,GO:1903320,GO:1903321,GO:1904666,GO:1904667,GO:2000026,GO:2000030
KEGG Pathwayko00310,ko00514,map00310,map00514
KEGG ReactionR03380
KEGG koko:K11703
KEGG rclassRC00005,RC00397
Preferred nameC9orf78
Seed eggNOG ortholog2880.D7G4L3
Seed ortholog evalue2.5e-137
Seed ortholog score495.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17089.1prot_E-siliculosus-1a_M_contig9.17089.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig9 1965234..1967915 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936414.4786954-CDS-E-siliculosus-1a_M_contig9:1965233..19653621622936414.4786954-CDS-E-siliculosus-1a_M_contig9:1965233..1965362Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1965234..1965362 -
1696251067.369439-CDS-E-siliculosus-1a_M_contig9:1965233..19653621696251067.369439-CDS-E-siliculosus-1a_M_contig9:1965233..1965362Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1965234..1965362 -
1622936414.4955103-CDS-E-siliculosus-1a_M_contig9:1965687..19658531622936414.4955103-CDS-E-siliculosus-1a_M_contig9:1965687..1965853Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1965688..1965853 -
1696251067.3835206-CDS-E-siliculosus-1a_M_contig9:1965687..19658531696251067.3835206-CDS-E-siliculosus-1a_M_contig9:1965687..1965853Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1965688..1965853 -
1622936414.552417-CDS-E-siliculosus-1a_M_contig9:1966513..19666501622936414.552417-CDS-E-siliculosus-1a_M_contig9:1966513..1966650Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1966514..1966650 -
1696251067.3964114-CDS-E-siliculosus-1a_M_contig9:1966513..19666501696251067.3964114-CDS-E-siliculosus-1a_M_contig9:1966513..1966650Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1966514..1966650 -
1622936414.5694897-CDS-E-siliculosus-1a_M_contig9:1967057..19673771622936414.5694897-CDS-E-siliculosus-1a_M_contig9:1967057..1967377Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1967058..1967377 -
1696251067.4058158-CDS-E-siliculosus-1a_M_contig9:1967057..19673771696251067.4058158-CDS-E-siliculosus-1a_M_contig9:1967057..1967377Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1967058..1967377 -
1622936414.5895314-CDS-E-siliculosus-1a_M_contig9:1967782..19679151622936414.5895314-CDS-E-siliculosus-1a_M_contig9:1967782..1967915Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1967783..1967915 -
1696251067.4151833-CDS-E-siliculosus-1a_M_contig9:1967782..19679151696251067.4151833-CDS-E-siliculosus-1a_M_contig9:1967782..1967915Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig9 1967783..1967915 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig9.17089.1

>prot_E-siliculosus-1a_M_contig9.17089.1 ID=prot_E-siliculosus-1a_M_contig9.17089.1|Name=mRNA_E-siliculosus-1a_M_contig9.17089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=295bp
RLDLLTDLREEQRARRKGGGRSVSALMGGRRQAKEKDALVIKGQGVDGTG
AEAAGEAANDAFGLKPEVKAPNISTMMESAFKSGGTGGWGAAADSAGSVP
HEQLMEQYVKDKMGGEEGADAKEEEDGGGGSNNMLSEEDRLYTIPEDFKK
KVEEAKVEFDTGANRGDEMDGEVGSGAQIAWNTGLAEIALPIEFKLKNME
DTLAARDKMESVRAARRNAPGASSSLSGSLTANYSHHQKEWALQIRALQN
RQAMAEESQTKAPTKSGPGMAASAQLSGSNNNNNDAGGGAGRGGG
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mRNA from alignment at E-siliculosus-1a_M_contig9:1965233..1967915-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig9.17089.1 ID=mRNA_E-siliculosus-1a_M_contig9.17089.1|Name=mRNA_E-siliculosus-1a_M_contig9.17089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2683bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1965233..1967915- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CGCTTGGACCTACTGACGGACCTTCGAGAGGAGCAGCGGGCCAGGAGGAA AGGCGGCGGCCGCTCGGTGTCGGCCCTGATGGGAGGGCGGCGGCAAGCGA AGGAGAAGGACGCCTTGGTCATCAAGGGCCAAGGTGCGTGCAACCCCCCC CCCTGTTCTGTCTTCTCGAGGACGCGTGTCAATGATCTAACCGCTAAGGC ATGCGAGACATGAGTACGCCCCCCCTGCTCGTGTGTGAAAGTCGGCGGCA AGGTATGAAGTACGTGGCACTTTCGGTCCTGAAAGGGGCGCGACAGCGCA GACTTGGGCTATAACTATTTGTGTCTGCCGCAACCCTGATTCAGGCTGAA ACTTGGCTCATCGTTGTCTACATGGGAAGAACCCTTGTACCAAGCGAGTC GCTTCTTCTGCTTTTTTTCGTTCGAAAGACGGATCCGCCCGCCGAGCCTT TGCGTGCGCGGTCGTTCTCGAAACCTACACAAGACTCCGCTGCTCAGTCG CTGACTACTTGTAGCGGTGCGTGTTTTGGCGGGTACAGGTGTCGACGGTA CAGGGGCGGAGGCGGCGGGCGAGGCAGCGAACGACGCCTTCGGCCTAAAG CCGGAGGTCAAAGCCCCCAACATCTCTACCATGATGGAATCCGCCTTCAA GTCCGGCGGCACCGGGGGGTGGGGAGCGGCGGCGGATTCGGCGGGGTCGG TTCCGCACGAGCAGCTCATGGAGCAGTACGTGAAGGACAAGATGGGCGGC GAGGAGGGGGCAGACGCGAAGGAGGAAGAGGACGGGGGCGGGGGGAGCAA CAACATGCTTAGTGAGGAGGACCGGCTGTACACCATCCCCGAGGACTTCA AGAAGAAGGTGAGGCGGGGTTGTTGCTGTTGCGGTTGGCGGCGGGGACCA TATGGCTCGGAAGGTTTGAAAAGATCCCTACGGAGCAACGTTCGGGCTCG AAAAGAGGGGGGAGCTGGAATTATTCATTCAAATTGGAGGGGATGGGGTG TTTGAGCGACAGGTTGGGCTCCCCATGGAACGTGTTTCGTGGGAAAGATA TTAAATCTGGAGCCTAAATGGAACGAGTGTTCTCATGATTATTTCCCGGT TAAACCCGTCCACTCGCGACGCCGTAGTCCCCTTGCCTTGTTGGCATTTC ATCGTTGTATGCATAGCCGAATTTTCAGCTGCATTTACACACACAGAGCT CGCAGCATGCAGTTGTTTTCACGCGTGACTTGGAATGAACGCGCCTTGAA CGAACGCCTGCCCAGGTGGAGGAAGCGAAGGTCGAGTTTGACACGGGAGC GAACAGGGGAGATGAGATGGATGGAGAGGTCGGCAGCGGAGCGCAGATTG CGTGGAACACGGGTCTCGCCGAGATCGCGCTGCCAATCGAGTTCAAGCTC AAGTGAGAGACAGGCACCCGCACTTTTTGCGCCGTAGTCGGATTGCACAT TAGAAAATGAGTTTGGTATTTTGATGACGTTCGTTGATTGTTGTCCCGCA CCCCACGAAATCTTCTTGTGGCGTGGTACTAACTTTTTTACTTGTTCAGC AGTTTTTGAACCAGGTGTATCATCTTTCACGCGCATGTCGCTTGGGACAC AGCCTTCCCAACGAATACGCTGAAATGTCTCAATTCTGTAGTTTCTACGG CCGCGCAAGTAGCCCCCCCCCACCCCCTACCATGACAGAATGAAAAGTCT AGAGAGGAATACCAGAGTGTGAGGAGATTTTGTATATCACAGTTCCGCCC TACATGCTGCCTCCCCCCGATTTGTTCGCCGCGAAGTATCCCGCACCTGG CACTATTTGGAGAATAAGCCAGCCTGAATATTCCATCCGCGCCACTGAAT ATTCCATCGGTGCCACGCCCCTTCATCAACATGGCACTTTTGAGGAACCT CACAACCGTAGCAGTCGTGCGACTCGCGGTGACCCCCCTCCCGACCAAGT TTGCGATGCCCCCTGGTAGGAACAACTTCATGTCGAAAGTTTTCAGAGTG CACAGATCAAATGGCGAAGGCGAGCAACAAAATGTTTCCCTCCCCGCTAC CGCAATGAACAGGAACATGGAAGACACGCTTGCGGCGAGGGACAAGATGG AGTCGGTTCGAGCAGCTCGACGAAACGCTCCCGGGGCTTCGTCCTCGCTT TCGGGTTCGTTGACCGCCAACTACTCGCACCACCAGAAGGAGTGGGCCCT GCAGATCAGGGCGCTGCAGAACAGACAGGTATGTTGCGTATCGGCTTTCT TGACGGTGTGTTCGGCCGGTATGGGCATGGTACTGGGATGTGGCGGTCTA TCGTTTGTCGGCCGCGCCAGCAGTTTTTTGGCGCAGGACTGGTGTGTACA ATTTGGTTTTGCACGAGGGATTTTGTGGCTGGTTGTGGTCCTGCTGCCTG CTTTTTATTACTTTCACCTTGCATCACCCCTTCATGACACTGCTGTGCTC TCATGAGCCAGCCGACTCCGGAGGGATCACTAGTACATTCAGACACCCAG AGTGATCCACCTCCCTTTCCGTCACTTCCTACCATACTCCTCTCGTCTTG CAGGCCATGGCAGAAGAAAGCCAAACCAAGGCTCCCACCAAGAGCGGTCC AGGCATGGCCGCTTCCGCACAACTCTCCGGCAGCAATAACAACAACAACG ATGCAGGAGGGGGGGCTGGGAGGGGCGGTGGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1965233..1967915-

>mRNA_E-siliculosus-1a_M_contig9.17089.1 ID=mRNA_E-siliculosus-1a_M_contig9.17089.1|Name=mRNA_E-siliculosus-1a_M_contig9.17089.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1770bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1965233..1967915- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CGCTTGGACCTACTGACGGACCTTCGAGAGGAGCAGCGGGCCAGGAGGAA
AGGCGGCGGCCGCTCGGTGTCGGCCCTGATGGGAGGGCGGCGGCAAGCGA
AGGAGAAGGACGCCTTGGTCATCAAGGGCCAAGCGCTTGGACCTACTGAC
GGACCTTCGAGAGGAGCAGCGGGCCAGGAGGAAAGGCGGCGGCCGCTCGG
TGTCGGCCCTGATGGGAGGGCGGCGGCAAGCGAAGGAGAAGGACGCCTTG
GTCATCAAGGGCCAAGGTGTCGACGGTACAGGGGCGGAGGCGGCGGGCGA
GGCAGCGAACGACGCCTTCGGCCTAAAGCCGGAGGTCAAAGCCCCCAACA
TCTCTACCATGATGGAATCCGCCTTCAAGTCCGGCGGCACCGGGGGGTGG
GGAGCGGCGGCGGATTCGGCGGGGTCGGTTCCGCACGAGCAGCTCATGGA
GCAGTACGTGAAGGACAAGATGGGCGGCGAGGAGGGGGCAGACGCGAAGG
AGGAAGAGGACGGGGGCGGGGGGAGCAACAACATGCTTAGTGAGGAGGAC
CGGCTGTACACCATCCCCGAGGACTTCAAGAAGAAGGTGTCGACGGTACA
GGGGCGGAGGCGGCGGGCGAGGCAGCGAACGACGCCTTCGGCCTAAAGCC
GGAGGTCAAAGCCCCCAACATCTCTACCATGATGGAATCCGCCTTCAAGT
CCGGCGGCACCGGGGGGTGGGGAGCGGCGGCGGATTCGGCGGGGTCGGTT
CCGCACGAGCAGCTCATGGAGCAGTACGTGAAGGACAAGATGGGCGGCGA
GGAGGGGGCAGACGCGAAGGAGGAAGAGGACGGGGGCGGGGGGAGCAACA
ACATGCTTAGTGAGGAGGACCGGCTGTACACCATCCCCGAGGACTTCAAG
AAGAAGGTGGAGGAAGCGAAGGTCGAGTTTGACACGGGAGCGAACAGGGG
AGATGAGATGGATGGAGAGGTCGGCAGCGGAGCGCAGATTGCGTGGAACA
CGGGTCTCGCCGAGATCGCGCTGCCAATCGAGTTCAAGCTCAAGTGGAGG
AAGCGAAGGTCGAGTTTGACACGGGAGCGAACAGGGGAGATGAGATGGAT
GGAGAGGTCGGCAGCGGAGCGCAGATTGCGTGGAACACGGGTCTCGCCGA
GATCGCGCTGCCAATCGAGTTCAAGCTCAAGAACATGGAAGACACGCTTG
CGGCGAGGGACAAGATGGAGTCGGTTCGAGCAGCTCGACGAAACGCTCCC
GGGGCTTCGTCCTCGCTTTCGGGTTCGTTGACCGCCAACTACTCGCACCA
CCAGAAGGAGTGGGCCCTGCAGATCAGGGCGCTGCAGAACAGACAGGAAC
ATGGAAGACACGCTTGCGGCGAGGGACAAGATGGAGTCGGTTCGAGCAGC
TCGACGAAACGCTCCCGGGGCTTCGTCCTCGCTTTCGGGTTCGTTGACCG
CCAACTACTCGCACCACCAGAAGGAGTGGGCCCTGCAGATCAGGGCGCTG
CAGAACAGACAGGCCATGGCAGAAGAAAGCCAAACCAAGGCTCCCACCAA
GAGCGGTCCAGGCATGGCCGCTTCCGCACAACTCTCCGGCAGCAATAACA
ACAACAACGATGCAGGAGGGGGGGCTGGGAGGGGCGGTGGGGCCATGGCA
GAAGAAAGCCAAACCAAGGCTCCCACCAAGAGCGGTCCAGGCATGGCCGC
TTCCGCACAACTCTCCGGCAGCAATAACAACAACAACGATGCAGGAGGGG
GGGCTGGGAGGGGCGGTGGG
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