mRNA_E-siliculosus-1a_M_contig9.17082.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 434 bits (1117), Expect = 5.820e-154 Identity = 214/223 (95.96%), Postives = 215/223 (96.41%), Query Frame = 1
Query: 1 MVKFTAGFALASVLSLAHATDFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 669
MVKFTAGFALASVLSLAHATDFK VRVRNLTYLQPFSPMLVVAHTNDVALFKEG PASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDES CPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGN+ED PGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ
Sbjct: 1 MVKFTAGFALASVLSLAHATDFK-----VRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 218
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 343 bits (881), Expect = 3.170e-118 Identity = 161/198 (81.31%), Postives = 178/198 (89.90%), Query Frame = 1
Query: 70 ASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 663
A E+ VRVRNLTYLQPFSPM VVAHTNDV++F+EGFPASDA+K+MAEDGDNSAL+EL AS+DV PYICG V GE P+FPG+TWRG +T+DES+CPD YSVVSMLINTNDAFVGIDS+ L G+ KVFPPAFDAGTEANNELCTHIPGPACPADSGN+EDGPGE FI V RGFHGVGPDLGEANYDWRNPVAEV +A
Sbjct: 4 AGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 335 bits (859), Expect = 1.430e-114 Identity = 164/224 (73.21%), Postives = 189/224 (84.38%), Query Frame = 1
Query: 1 MVKFTAGFALASVLSLAHAT--DFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
MV FTA FA+AS++SLA+A+ D+ VRVRNLTYLQPFSP L+VAHT DVALFKEGFPA+DAIKLMAEDGDNSALLEL+ S DVAPYICG V EGPVFPGETWRG L +D +CP+PVYSVV+MLINTNDAFVGIDSD L + GS+K FPPAFDAGTE N+E C++IPGP CPA SGN ++GPGE +IHVHRG HGVG DL EA+YDWRNPVAE++I +
Sbjct: 1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLEL-GSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYIQK 222
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 201 bits (510), Expect = 6.180e-61 Identity = 106/196 (54.08%), Postives = 131/196 (66.84%), Query Frame = 1
Query: 85 VRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPGEE-FIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
VRV NLT+ Q FSP ++VAH LF G A AIKLMAEDG+N ++ +A + CG A EGP+ PG+TW G +T D C +PVYSVV+ L NTNDAF+GID SK+FPPAFDAGTE NNE CT +PG ACPA + E+ G G E FIHVHRG +GVG DL +A+Y W+NPVAEV +++
Sbjct: 77 VRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVSK 268
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 196 bits (497), Expect = 7.200e-60 Identity = 106/197 (53.81%), Postives = 129/197 (65.48%), Query Frame = 1
Query: 85 VRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED--GPGEE-FIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
VRV NLT+ Q FSP ++VAH LF +G A AIK MAE+G N + +A +D CG A EGP+ PG+TW G +T D + C PVYSVV+ L NTNDAF+GID SK+FPPAFDAGTE NNE CT I G ACPA E+ G G E FIHVHRG +GVG DL +A+YDW+NPVAEV +++
Sbjct: 6 VRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVSK 198
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 186 bits (473), Expect = 4.350e-56 Identity = 108/216 (50.00%), Postives = 131/216 (60.65%), Query Frame = 1
Query: 37 VLSLAHATDFKASELC---VRVRNLTYLQPFSPMLVVAHTNDVA-LFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIED-GPGEE-FIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
+LSLA S + VRV NLT+ Q FSP ++VAH LF G A AIK MAE+G N + +A + CG EGP+ PG+TW G +T D + C +PVYSVV+ L NTNDAF+GID SK FPPAFDAGTE NNE CT +PG ACPA E+ G G E FIHVHRG GVG DL +A+Y W NPVAEV +++
Sbjct: 1 MLSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNGMVKVIATRES---GFCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVSK 212
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 179 bits (454), Expect = 5.110e-53 Identity = 110/233 (47.21%), Postives = 143/233 (61.37%), Query Frame = 1
Query: 1 MVKFTAGFALASVLSLAHATDFKASELC---VRVRNLTYLQPFSPMLVVAHTNDVA-LFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGE--GPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGS--SKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPG---EEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
MVKF G ALAS+LSLA + + S + VRV NLT+ Q FS ++VAH LF EG A +AI ++AE+G + + +A + CG A E G +FPG+TW G + D + C DPVYSVV+ L NTNDAF+GI GS SK FPPAFDAG+E NNE CT +PG ACP + + + G E FIHVHRGF G+G DL + +Y W+NPVA V +++
Sbjct: 1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATRER---GFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPA-GSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSK-DYGWQNPVAVVVVSK 227
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 153 bits (387), Expect = 6.110e-43 Identity = 90/212 (42.45%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 43 SLAHATDFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEEFIHVHRGFHGVG---PDLGEANYDWRNPVAEVFIARQ 669
++A T++ + V+NL YLQPFSP+L V H + LF+ G PAS A++ +AE GD S + L D ICG G P T++GT+TI + C +P S+V+ML TNDAF GI++ L S + PA+DAGTE NNE C ++ G CP G GE F+HVHRG HG+ P L +YDWRNPVA + ++ Q
Sbjct: 16 AVALPTEYVGKTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVAL--FQDGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGLNVSKPGLS-VDYDWRNPVAYITVSVQ 221
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: A0A0S8ARA7_9BACT (Spondin domain-containing protein n=1 Tax=Nitrospira bacterium SG8_35_4 TaxID=1704025 RepID=A0A0S8ARA7_9BACT) HSP 1 Score: 136 bits (343), Expect = 2.290e-36 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1
Query: 91 VRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVF-PPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
V N+T Q F+P+LV+ H V+LF G PAS A+ +AE GD L E+ + + P + V +G +FPGET T+ I +S + S+ +M+I TND F+ ++ G++ ++ PA+DAG+E N+ELC +IPGP C ++ + EDG G ++ +H G HG+G L E+ YDWRNPVA + I R
Sbjct: 35 VTNMTKGQTFTPILVLTHRRGVSLFTPGSPASMALAALAEAGDTGPLTEMMSMN---PGVRDIVTSDGLLFPGET--KTIMIPQSERYRYI-SIAAMIIPTNDGFIALNGVQAPAGGNAVMYLSPAYDAGSEMNDELCDNIPGPVCGGEAISEEDGEG--YVRIHEGIHGIG-SLDESIYDWRNPVARIVIQR 218
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Match: A0A7U6JI78_9GAMM (Spondin domain-containing protein n=1 Tax=Thiolapillus brandeum TaxID=1076588 RepID=A0A7U6JI78_9GAMM) HSP 1 Score: 134 bits (337), Expect = 1.450e-35 Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 55 ATDFKASELCVRVRNLTYLQPFSPMLVVAHTNDVALFKEGFPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESVCPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVF--PPAFDAGTEANNELCTHIPGPACPADSGNIEDGPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIAR 666
AT A + V + NLT Q F+P+LV H + +F G AS ++ +AE GD S L A+ D + + VA +G + PG++ TLT+D+S S+ SMLI TNDAF+GI + ++ V PA+DAGTE N+ELC++IPGP C ++E+G G FI VH G HGVG DL YDWRNP A V I R
Sbjct: 19 ATSSLADDYQVTITNLTQSQFFTPILVATHKRGMPVFIPGSAASSDLEALAEGGDISLLK---ATLDASSEVHETVASDGLLGPGQSV--TLTLDDSK-RFRYLSLASMLIPTNDAFIGISGMKMPKKKNAPVMIPVPAYDAGTEMNDELCSNIPGPDCGGAGMSVENGEG--FISVHPGIHGVG-DLAPGTYDWRNPAAMVKIER 215 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17082.1 >prot_E-siliculosus-1a_M_contig9.17082.1 ID=prot_E-siliculosus-1a_M_contig9.17082.1|Name=mRNA_E-siliculosus-1a_M_contig9.17082.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=224bp MVKFTAGFALASVLSLAHATDFKASELCVRVRNLTYLQPFSPMLVVAHTNback to top mRNA from alignment at E-siliculosus-1a_M_contig9:1853237..1865877+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17082.1 ID=mRNA_E-siliculosus-1a_M_contig9.17082.1|Name=mRNA_E-siliculosus-1a_M_contig9.17082.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=12641bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1853237..1865877+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:1853237..1865877+ >mRNA_E-siliculosus-1a_M_contig9.17082.1 ID=mRNA_E-siliculosus-1a_M_contig9.17082.1|Name=mRNA_E-siliculosus-1a_M_contig9.17082.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1344bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:1853237..1865877+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |